3gk6 - Revision history

OCA at 08:07, 9 March 2022

OCA — Wed, 09 Mar 2022 08:07:15 GMT

←Older revision		Revision as of 08:07, 9 March 2022
Line 1:		Line 1:

	==Crystal structure from the mobile metagenome of Vibrio cholerae. Integron cassette protein VCH_CASS2.==		==Crystal structure from the mobile metagenome of Vibrio cholerae. Integron cassette protein VCH_CASS2.==
-	<StructureSection load='3gk6' size='340' side='right' caption='[[3gk6]], [[Resolution\|resolution]] 1.80Å' scene=''>	+	<StructureSection load='3gk6' size='340' side='right'caption='[[3gk6]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3gk6]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"bacillo_virgola_del_koch"_trevisan_1884 "bacillo virgola del koch" trevisan 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GK6 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3GK6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3gk6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillo_virgola_del_koch"_trevisan_1884 "bacillo virgola del koch" trevisan 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GK6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GK6 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">OPVCH_OP4G ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">OPVCH_OP4G ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3gk6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gk6 OCA], [~~http~~://pdbe.org/3gk6 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3gk6 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3gk6 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3gk6 ProSAT], [~~http~~://www.topsan.org/Proteins/MCSG/3gk6 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gk6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gk6 OCA], [https://pdbe.org/3gk6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gk6 RCSB], [https://www.ebi.ac.uk/pdbsum/3gk6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gk6 ProSAT], [https://www.topsan.org/Proteins/MCSG/3gk6 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 33:		Line 33:
	</StructureSection>		</StructureSection>
	[[Category: Bacillo virgola del koch trevisan 1884]]		[[Category: Bacillo virgola del koch trevisan 1884]]
		+	[[Category: Large Structures]]
	[[Category: Boucher, Y]]		[[Category: Boucher, Y]]
	[[Category: Chang, C]]		[[Category: Chang, C]]

OCA at 05:40, 7 December 2018

OCA — Fri, 07 Dec 2018 05:40:35 GMT

←Older revision		Revision as of 05:40, 7 December 2018
Line 1:		Line 1:
		+
	==Crystal structure from the mobile metagenome of Vibrio cholerae. Integron cassette protein VCH_CASS2.==		==Crystal structure from the mobile metagenome of Vibrio cholerae. Integron cassette protein VCH_CASS2.==
	<StructureSection load='3gk6' size='340' side='right' caption='[[3gk6]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='3gk6' size='340' side='right' caption='[[3gk6]], [[Resolution\|resolution]] 1.80Å' scene=''>
Line 6:		Line 7:
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">OPVCH_OP4G ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">OPVCH_OP4G ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gk6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gk6 OCA], [http://pdbe.org/3gk6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gk6 RCSB], [http://www.ebi.ac.uk/pdbsum/3gk6 PDBsum], [http://www.topsan.org/Proteins/MCSG/3gk6 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gk6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gk6 OCA], [http://pdbe.org/3gk6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gk6 RCSB], [http://www.ebi.ac.uk/pdbsum/3gk6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gk6 ProSAT], [http://www.topsan.org/Proteins/MCSG/3gk6 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gk/3gk6_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gk/3gk6_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 09:45, 9 February 2016

OCA — Tue, 09 Feb 2016 09:45:19 GMT

←Older revision		Revision as of 09:45, 9 February 2016
Line 2:		Line 2:
	<StructureSection load='3gk6' size='340' side='right' caption='[[3gk6]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='3gk6' size='340' side='right' caption='[[3gk6]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3gk6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Vibrio_cholerae Vibrio cholerae~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GK6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GK6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3gk6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillo_virgola_del_koch"_trevisan_1884 "bacillo virgola del koch" trevisan 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GK6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GK6 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">OPVCH_OP4G ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 ~~Vibrio cholerae~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">OPVCH_OP4G ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gk6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gk6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gk6 RCSB], [http://www.ebi.ac.uk/pdbsum/3gk6 PDBsum], [http://www.topsan.org/Proteins/MCSG/3gk6 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gk6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gk6 OCA], [http://pdbe.org/3gk6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gk6 RCSB], [http://www.ebi.ac.uk/pdbsum/3gk6 PDBsum], [http://www.topsan.org/Proteins/MCSG/3gk6 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gk6 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 26:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3gk6" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Vibrio cholerae~~]]	+	[[Category: Bacillo virgola del koch trevisan 1884]]
	[[Category: Boucher, Y]]		[[Category: Boucher, Y]]
	[[Category: Chang, C]]		[[Category: Chang, C]]
Line 52:		Line 53:
	[[Category: Unknown function]]		[[Category: Unknown function]]
	[[Category: Usa]]		[[Category: Usa]]
		+	[[Category: Vibrio cholerae]]
	[[Category: Woods hole]]		[[Category: Woods hole]]

OCA at 09:15, 8 December 2014

OCA — Mon, 08 Dec 2014 09:15:46 GMT

←Older revision		Revision as of 09:15, 8 December 2014
Line 1:		Line 1:
-	[[~~Image:~~3gk6.~~png~~\|~~left~~\|200px]]	+	==Crystal structure from the mobile metagenome of Vibrio cholerae. Integron cassette protein VCH_CASS2.==
		+	<StructureSection load='3gk6' size='340' side='right' caption='[[3gk6]], [[Resolution\|resolution]] 1.80Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3gk6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GK6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GK6 FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">OPVCH_OP4G ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 Vibrio cholerae])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gk6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gk6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gk6 RCSB], [http://www.ebi.ac.uk/pdbsum/3gk6 PDBsum], [http://www.topsan.org/Proteins/MCSG/3gk6 TOPSAN]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gk/3gk6_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	BACKGROUND: The direct isolation of integron gene cassettes from cultivated and environmental microbial sources allows an assessment of the impact of the integron/gene cassette system on the emergence of new phenotypes, such as drug resistance or virulence. A structural approach is being exploited to investigate the modularity and function of novel integron gene cassettes. METHODOLOGY/PRINCIPAL FINDINGS: We report the 1.8 A crystal structure of Cass2, an integron-associated protein derived from an environmental V. cholerae. The structure defines a monomeric beta-barrel protein with a fold related to the effector-binding portion of AraC/XylS transcription activators. The closest homologs of Cass2 are multi-drug binding proteins, such as BmrR. Consistent with this, a binding pocket made up of hydrophobic residues and a single glutamate side chain is evident in Cass2, occupied in the crystal form by polyethylene glycol. Fluorescence assays demonstrate that Cass2 is capable of binding cationic drug compounds with submicromolar affinity. The Cass2 module possesses a protein interaction surface proximal to its drug-binding cavity with features homologous to those seen in multi-domain transcriptional regulators. CONCLUSIONS/SIGNIFICANCE: Genetic analysis identifies Cass2 to be representative of a larger family of independent effector-binding proteins associated with lateral gene transfer within Vibrio and closely-related species. We propose that the Cass2 family not only has capacity to form functional transcription regulator complexes, but represents possible evolutionary precursors to multi-domain regulators associated with cationic drug compounds.

-	~~{{STRUCTURE_3gk6\| PDB=3gk6 \| SCENE= }}~~	+	Crystal Structure of an Integron Gene Cassette-Associated Protein from Vibrio cholerae Identifies a Cationic Drug-Binding Module.,Deshpande CN, Harrop SJ, Boucher Y, Hassan KA, Leo RD, Xu X, Cui H, Savchenko A, Chang C, Labbate M, Paulsen IT, Stokes HW, Curmi PM, Mabbutt BC PLoS One. 2011 Mar 3;6(3):e16934. PMID:21390267<ref>PMID:21390267</ref>

-	~~===Crystal structure from~~ the ~~mobile metagenome~~ of ~~Vibrio cholerae~~. ~~Integron cassette protein VCH_CASS2.===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_21390267}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[3gk6]] is a 1 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GK6 OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:021390267<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Vibrio cholerae]]		[[Category: Vibrio cholerae]]
-	[[Category: Boucher, Y.]]	+	[[Category: Boucher, Y]]
-	[[Category: Chang, C.]]	+	[[Category: Chang, C]]
-	[[Category: Cui, H.]]	+	[[Category: Cui, H]]
-	[[Category: Curmi, P M.G.]]	+	[[Category: Curmi, P M.G]]
-	[[Category: Deshpande, C N.]]	+	[[Category: Deshpande, C N]]
-	[[Category: Edwards, A M.]]	+	[[Category: Edwards, A M]]
-	[[Category: Harrop, S J.]]	+	[[Category: Harrop, S J]]
-	[[Category: Joachimiak, A.]]	+	[[Category: Joachimiak, A]]
-	[[Category: ~~MCSG, Midwest Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Mabbutt, B C.]]	+	[[Category: Mabbutt, B C]]
-	[[Category: Savchenko, A.]]	+	[[Category: Savchenko, A]]
-	[[Category: Stokes, H W.]]	+	[[Category: Stokes, H W]]
-	[[Category: Sureshan, V.]]	+	[[Category: Sureshan, V]]
-	[[Category: Xu, X.]]	+	[[Category: Xu, X]]
	[[Category: Integron cassette protein]]		[[Category: Integron cassette protein]]
	[[Category: Mcsg]]		[[Category: Mcsg]]
-	[[Category: Midwest center for structural genomic]]
	[[Category: Novel]]		[[Category: Novel]]
	[[Category: Oyster pond]]		[[Category: Oyster pond]]
-	[[Category: Protein structure initiative]]	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category: Psi-2]]~~	+
-	~~[[Category: Structural genomic~~]]	+
	[[Category: Unknown function]]		[[Category: Unknown function]]
	[[Category: Usa]]		[[Category: Usa]]
-	[[Category: Vibrio cholerae]]
	[[Category: Woods hole]]		[[Category: Woods hole]]

OCA at 15:12, 27 February 2013

OCA — Wed, 27 Feb 2013 15:12:23 GMT

←Older revision		Revision as of 15:12, 27 February 2013
Line 1:		Line 1:
	[[Image:3gk6.png\|left\|200px]]		[[Image:3gk6.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3gk6", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3gk6\| PDB=3gk6 \| SCENE= }}		{{STRUCTURE_3gk6\| PDB=3gk6 \| SCENE= }}

	===Crystal structure from the mobile metagenome of Vibrio cholerae. Integron cassette protein VCH_CASS2.===		===Crystal structure from the mobile metagenome of Vibrio cholerae. Integron cassette protein VCH_CASS2.===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_21390267}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 21390267 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_21390267}}		{{ABSTRACT_PUBMED_21390267}}

Line 22:		Line 11:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~21390267~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:021390267</ref><references group="xtra"/>
	[[Category: Vibrio cholerae]]		[[Category: Vibrio cholerae]]
	[[Category: Boucher, Y.]]		[[Category: Boucher, Y.]]
Line 38:		Line 27:
	[[Category: Sureshan, V.]]		[[Category: Sureshan, V.]]
	[[Category: Xu, X.]]		[[Category: Xu, X.]]
		+	[[Category: Integron cassette protein]]
		+	[[Category: Mcsg]]
		+	[[Category: Midwest center for structural genomic]]
		+	[[Category: Novel]]
		+	[[Category: Oyster pond]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-2]]
		+	[[Category: Structural genomic]]
		+	[[Category: Unknown function]]
		+	[[Category: Usa]]
		+	[[Category: Vibrio cholerae]]
		+	[[Category: Woods hole]]

OCA: Protected "3gk6" [edit=sysop:move=sysop]

OCA — Wed, 23 Mar 2011 05:41:27 GMT

Protected "3gk6" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:41, 23 March 2011

OCA at 05:41, 23 March 2011

OCA — Wed, 23 Mar 2011 05:41:24 GMT

←Older revision		Revision as of 05:41, 23 March 2011
Line 1:		Line 1:
-	~~{{Seed}}~~	+	[[Image:3gk6.png\|left\|200px]]
-	[[Image:3gk6.~~jpg~~\|left\|200px]]	+

	<!--		<!--
Line 12:		Line 11:
	===Crystal structure from the mobile metagenome of Vibrio cholerae. Integron cassette protein VCH_CASS2.===		===Crystal structure from the mobile metagenome of Vibrio cholerae. Integron cassette protein VCH_CASS2.===

		+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_21390267}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 21390267 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_21390267}}

	==About this Structure==		==About this Structure==
-	~~3GK6~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GK6 OCA].	+	[[3gk6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GK6 OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:21390267</ref><references group="xtra"/>
	[[Category: Vibrio cholerae]]		[[Category: Vibrio cholerae]]
	[[Category: Boucher, Y.]]		[[Category: Boucher, Y.]]
Line 30:		Line 38:
	[[Category: Sureshan, V.]]		[[Category: Sureshan, V.]]
	[[Category: Xu, X.]]		[[Category: Xu, X.]]
-	[[Category: Integron cassette protein]]
-	[[Category: Mcsg]]
-	[[Category: Midwest center for structural genomic]]
-	[[Category: Novel]]
-	[[Category: Oyster pond]]
-	[[Category: Protein structure initiative]]
-	[[Category: Psi-2]]
-	[[Category: Structural genomic]]
-	[[Category: Unknown function]]
-	[[Category: Usa]]
-	[[Category: Vibrio cholerae]]
-	[[Category: Woods hole]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 25 12:49:32 2009''

OCA: New page: {{Seed}} 200px