3gka - Revision history

OCA at 07:07, 6 September 2023

OCA — Wed, 06 Sep 2023 07:07:18 GMT

←Older revision		Revision as of 07:07, 6 September 2023
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	<StructureSection load='3gka' size='340' side='right'caption='[[3gka]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='3gka' size='340' side='right'caption='[[3gka]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3gka]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"bacillus_pseudomallei"_whitmore_1913 "bacillus~~ pseudomallei~~" whitmore 1913~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GKA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GKA FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3gka]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_pseudomallei Burkholderia pseudomallei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GKA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GKA FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.3Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>BPSS0877 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~28450~~ "~~Bacillus pseudomallei~~" ~~Whitmore 1913])~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gka FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gka OCA], [https://pdbe.org/3gka PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gka RCSB], [https://www.ebi.ac.uk/pdbsum/3gka PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gka ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gka FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gka OCA], [https://pdbe.org/3gka PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gka RCSB], [https://www.ebi.ac.uk/pdbsum/3gka PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gka ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q3JFM9_BURP1 Q3JFM9_BURP1]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacillus~~ pseudomallei ~~whitmore 1913~~]]	+	[[Category: Burkholderia pseudomallei]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Structural genomic]]
-	[[Category: Decode biostructure]]
-	[[Category: Niaid]]
-	[[Category: Oxidoreductase]]
-	[[Category: Ssgcid]]
-	[[Category: Targetdb bupsa00093a]]

OCA at 08:07, 9 March 2022

OCA — Wed, 09 Mar 2022 08:07:20 GMT

←Older revision		Revision as of 08:07, 9 March 2022
Line 1:		Line 1:

	==Crystal structure of N-ethylmaleimidine reductase from Burkholderia pseudomallei==		==Crystal structure of N-ethylmaleimidine reductase from Burkholderia pseudomallei==
-	<StructureSection load='3gka' size='340' side='right' caption='[[3gka]], [[Resolution\|resolution]] 2.30Å' scene=''>	+	<StructureSection load='3gka' size='340' side='right'caption='[[3gka]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3gka]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"bacillus_pseudomallei"_whitmore_1913 "bacillus pseudomallei" whitmore 1913]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GKA OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3GKA FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3gka]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_pseudomallei"_whitmore_1913 "bacillus pseudomallei" whitmore 1913]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GKA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GKA FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BPSS0877 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=28450 "Bacillus pseudomallei" Whitmore 1913])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BPSS0877 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=28450 "Bacillus pseudomallei" Whitmore 1913])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3gka FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gka OCA], [~~http~~://pdbe.org/3gka PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3gka RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3gka PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3gka ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gka FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gka OCA], [https://pdbe.org/3gka PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gka RCSB], [https://www.ebi.ac.uk/pdbsum/3gka PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gka ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	</StructureSection>		</StructureSection>
	[[Category: Bacillus pseudomallei whitmore 1913]]		[[Category: Bacillus pseudomallei whitmore 1913]]
		+	[[Category: Large Structures]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Decode biostructure]]		[[Category: Decode biostructure]]

OCA at 05:46, 7 December 2018

OCA — Fri, 07 Dec 2018 05:46:53 GMT

←Older revision		Revision as of 05:46, 7 December 2018
Line 1:		Line 1:
		+
	==Crystal structure of N-ethylmaleimidine reductase from Burkholderia pseudomallei==		==Crystal structure of N-ethylmaleimidine reductase from Burkholderia pseudomallei==
	<StructureSection load='3gka' size='340' side='right' caption='[[3gka]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='3gka' size='340' side='right' caption='[[3gka]], [[Resolution\|resolution]] 2.30Å' scene=''>
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	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BPSS0877 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=28450 "Bacillus pseudomallei" Whitmore 1913])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BPSS0877 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=28450 "Bacillus pseudomallei" Whitmore 1913])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gka FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gka OCA], [http://pdbe.org/3gka PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gka RCSB], [http://www.ebi.ac.uk/pdbsum/3gka PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gka FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gka OCA], [http://pdbe.org/3gka PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gka RCSB], [http://www.ebi.ac.uk/pdbsum/3gka PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gka ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 11:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gk/3gka_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gk/3gka_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA: Protected "3gka" [edit=sysop:move=sysop]

OCA — Sun, 07 Feb 2016 19:15:42 GMT

Protected "3gka" [edit=sysop:move=sysop]

←Older revision

Revision as of 19:15, 7 February 2016

OCA: New page: ==Crystal structure of N-ethylmaleimidine reductase from Burkholderia pseudomallei== == Structural highlights ==
<table><tr><td colspan='2'>[[3gka]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pseudomallei"_whitmore_1913 "bacillus pseudomallei" whitmore 1913]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GKA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GKA FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BPSS0877 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=28450 "Bacillus pseudomallei" Whitmore 1913])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gka FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gka OCA], [http://pdbe.org/3gka PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gka RCSB], [http://www.ebi.ac.uk/pdbsum/3gka PDBsum]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
<jmolCheckbox>
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gk/3gka_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gka ConSurf].
<div style="clear:both"></div>
TOC
</StructureSection>
[[Category: Bacillus pseudomallei whitmore 1913]]
[[Category: Structural genomic]]
[[Category: Decode biostructure]]
[[Category: Niaid]]
[[Category: Oxidoreductase]]
[[Category: Ssgcid]]
[[Category: Targetdb bupsa00093a]]