3gz3 - Revision history

OCA at 07:13, 6 September 2023

OCA — Wed, 06 Sep 2023 07:13:53 GMT

←Older revision		Revision as of 07:13, 6 September 2023
Line 3:		Line 3:
	<StructureSection load='3gz3' size='340' side='right'caption='[[3gz3]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='3gz3' size='340' side='right'caption='[[3gz3]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3gz3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Leima Leima~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GZ3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GZ3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3gz3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GZ3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GZ3 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>~~, ~~<scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ORO:OROTIC+ACID'>ORO</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.9Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height: 3em;~~'>~~[[3c3n\|3c3n]], [[3gye\|3gye]]~~</~~div~~><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ORO:OROTIC+ACID'>ORO</scene></td></tr>
-	~~<tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">LmjF16.0530~~, ~~pyrD ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5664 LEIMA])~~<~~/td></tr>~~	+
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b></td><td class="sblockDat"><span class='plainlinks~~'>~~[https://en.wikipedia.org/wiki/Dihydroorotate_oxidase_(fumarate) Dihydroorotate oxidase (fumarate)], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.98.1 1.3.98.1]~~ </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gz3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gz3 OCA], [https://pdbe.org/3gz3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gz3 RCSB], [https://www.ebi.ac.uk/pdbsum/3gz3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gz3 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gz3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gz3 OCA], [https://pdbe.org/3gz3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gz3 RCSB], [https://www.ebi.ac.uk/pdbsum/3gz3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gz3 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q4QEW7_LEIMA Q4QEW7_LEIMA]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 26:		Line 26:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Leima~~]]	+	[[Category: Leishmania major]]
-	[[Category: Cordeiro~~, A T~~]]	+	[[Category: Cordeiro AT]]
-	[[Category: Feliciano~~, P R~~]]	+	[[Category: Feliciano PR]]
-	[[Category: Nonato~~, M C]]~~	+	[[Category: Nonato MC]]
-	~~[[Category: Dhodh]]~~	+
-	~~[[Category: Orotate]]~~	+
-	~~[[Category: Oxidoreductase~~]]	+

OCA at 07:58, 16 March 2022

OCA — Wed, 16 Mar 2022 07:58:41 GMT

←Older revision		Revision as of 07:58, 16 March 2022
Line 1:		Line 1:

	==Leishmania major Dihydroorotate Dehydrogenase in complex with orotate==		==Leishmania major Dihydroorotate Dehydrogenase in complex with orotate==
-	<StructureSection load='3gz3' size='340' side='right' caption='[[3gz3]], [[Resolution\|resolution]] 1.90Å' scene=''>	+	<StructureSection load='3gz3' size='340' side='right'caption='[[3gz3]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3gz3]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Leima Leima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GZ3 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3GZ3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3gz3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Leima Leima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GZ3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GZ3 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ORO:OROTIC+ACID'>ORO</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ORO:OROTIC+ACID'>ORO</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3c3n\|3c3n]], [[3gye\|3gye]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3c3n\|3c3n]], [[3gye\|3gye]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LmjF16.0530, pyrD ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5664 LEIMA])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LmjF16.0530, pyrD ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5664 LEIMA])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Dihydroorotate_oxidase_(fumarate) Dihydroorotate oxidase (fumarate)], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.98.1 1.3.98.1] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Dihydroorotate_oxidase_(fumarate) Dihydroorotate oxidase (fumarate)], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.98.1 1.3.98.1] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3gz3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gz3 OCA], [~~http~~://pdbe.org/3gz3 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3gz3 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3gz3 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3gz3 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gz3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gz3 OCA], [https://pdbe.org/3gz3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gz3 RCSB], [https://www.ebi.ac.uk/pdbsum/3gz3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gz3 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 20:		Line 20:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gz3 ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gz3 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+
		+	==See Also==
		+	*[[Dihydroorotate dehydrogenase 3D structures\|Dihydroorotate dehydrogenase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Leima]]		[[Category: Leima]]
	[[Category: Cordeiro, A T]]		[[Category: Cordeiro, A T]]

OCA at 05:37, 7 December 2018

OCA — Fri, 07 Dec 2018 05:37:17 GMT

←Older revision		Revision as of 05:37, 7 December 2018
Line 14:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gz/3gz3_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gz/3gz3_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 14:51, 5 August 2016

OCA — Fri, 05 Aug 2016 14:51:50 GMT

←Older revision		Revision as of 14:51, 5 August 2016
Line 1:		Line 1:
		+
	==Leishmania major Dihydroorotate Dehydrogenase in complex with orotate==		==Leishmania major Dihydroorotate Dehydrogenase in complex with orotate==
	<StructureSection load='3gz3' size='340' side='right' caption='[[3gz3]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='3gz3' size='340' side='right' caption='[[3gz3]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3gz3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Leishmania_major Leishmania major~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GZ3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GZ3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3gz3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Leima Leima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GZ3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GZ3 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ORO:OROTIC+ACID'>ORO</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ORO:OROTIC+ACID'>ORO</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3c3n\|3c3n]], [[3gye\|3gye]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3c3n\|3c3n]], [[3gye\|3gye]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LmjF16.0530, pyrD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5664 ~~Leishmania major~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LmjF16.0530, pyrD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5664 LEIMA])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/~~Dihydroorotate_oxidase~~ Dihydroorotate oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.3.1 1.3.3.1] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dihydroorotate_oxidase_(fumarate) Dihydroorotate oxidase (fumarate)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.98.1 1.3.98.1] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gz3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gz3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gz3 RCSB], [http://www.ebi.ac.uk/pdbsum/3gz3 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gz3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gz3 OCA], [http://pdbe.org/3gz3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gz3 RCSB], [http://www.ebi.ac.uk/pdbsum/3gz3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gz3 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 17:		Line 18:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gz3 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Dihydroorotate oxidase]]~~	+	[[Category: Leima]]
-	~~[[Category: Leishmania major~~]]	+
	[[Category: Cordeiro, A T]]		[[Category: Cordeiro, A T]]
	[[Category: Feliciano, P R]]		[[Category: Feliciano, P R]]

OCA at 22:59, 3 January 2015

OCA — Sat, 03 Jan 2015 22:59:01 GMT

←Older revision		Revision as of 22:59, 3 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3gz3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GZ3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GZ3 FirstGlance]. <br>		<table><tr><td colspan='2'>[[3gz3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GZ3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GZ3 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ORO:OROTIC+ACID'>ORO</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ORO:OROTIC+ACID'>ORO</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3c3n\|3c3n]], [[3gye\|3gye]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3c3n\|3c3n]], [[3gye\|3gye]]</td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LmjF16.0530, pyrD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5664 Leishmania major])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LmjF16.0530, pyrD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5664 Leishmania major])</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dihydroorotate_oxidase Dihydroorotate oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.3.1 1.3.3.1] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dihydroorotate_oxidase Dihydroorotate oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.3.1 1.3.3.1] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gz3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gz3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gz3 RCSB], [http://www.ebi.ac.uk/pdbsum/3gz3 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gz3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gz3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gz3 RCSB], [http://www.ebi.ac.uk/pdbsum/3gz3 PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 23:		Line 23:
	[[Category: Dihydroorotate oxidase]]		[[Category: Dihydroorotate oxidase]]
	[[Category: Leishmania major]]		[[Category: Leishmania major]]
-	[[Category: Cordeiro, A T.]]	+	[[Category: Cordeiro, A T]]
-	[[Category: Feliciano, P R.]]	+	[[Category: Feliciano, P R]]
-	[[Category: Nonato, M C.]]	+	[[Category: Nonato, M C]]
	[[Category: Dhodh]]		[[Category: Dhodh]]
	[[Category: Orotate]]		[[Category: Orotate]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]

OCA: Protected "3gz3" [edit=sysop:move=sysop]

OCA — Wed, 21 May 2014 09:52:58 GMT

Protected "3gz3" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:52, 21 May 2014

OCA at 09:52, 21 May 2014

OCA — Wed, 21 May 2014 09:52:53 GMT

←Older revision		Revision as of 09:52, 21 May 2014
Line 1:		Line 1:
-	~~{{Seed}}~~	+	==Leishmania major Dihydroorotate Dehydrogenase in complex with orotate==
-	~~[[Image:3gz3.jpg\|left\|200px]]~~	+	<StructureSection load='3gz3' size='340' side='right' caption='[[3gz3]], [[Resolution\|resolution]] 1.90Å' scene=''>
-		+	== Structural highlights ==
-	~~<!--~~	+	<table><tr><td colspan='2'>[[3gz3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GZ3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GZ3 FirstGlance]. <br>
-	~~The line below this paragraph, containing "STRUCTURE_3gz3", creates the "Structure Box" on the page.~~	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ORO:OROTIC+ACID'>ORO</scene><br>
-	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~	+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3c3n\|3c3n]], [[3gye\|3gye]]</td></tr>
-	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~	+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LmjF16.0530, pyrD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5664 Leishmania major])</td></tr>
-	~~or leave the SCENE parameter empty for the default display.~~	+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dihydroorotate_oxidase Dihydroorotate oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.3.1 1.3.3.1] </span></td></tr>
-	~~-->~~	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gz3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gz3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gz3 RCSB], [http://www.ebi.ac.uk/pdbsum/3gz3 PDBsum]</span></td></tr>
-	~~{{STRUCTURE_3gz3\| PDB=3gz3 \| SCENE= }}~~	+	<table>
-		+	== Evolutionary Conservation ==
-	===Leishmania major Dihydroorotate Dehydrogenase in complex with orotate===	+	[[Image:Consurf_key_small.gif\|200px\|right]]
-		+	Check<jmol>
-		+	<jmolCheckbox>
-	==~~About this Structure~~==	+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gz/3gz3_consurf.spt"</scriptWhenChecked>
-	~~3GZ3~~ is a 2 ~~chains~~ structure with ~~sequences~~ from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GZ3 OCA].	+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Dihydroorotate oxidase]]		[[Category: Dihydroorotate oxidase]]
	[[Category: Leishmania major]]		[[Category: Leishmania major]]
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	[[Category: Orotate]]		[[Category: Orotate]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 28 11:03:16 2010''

OCA at 08:03, 28 April 2010

OCA — Wed, 28 Apr 2010 08:03:17 GMT

←Older revision		Revision as of 08:03, 28 April 2010
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-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3gz3.jpg\|left\|200px]]

-	The ~~entry 3gz3~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3gz3", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3gz3\| PDB=3gz3 \| SCENE= }}

-	~~Authors: Cordeiro, A.T., Feliciano, P.R., Nonato, M.C.~~	+	===Leishmania major Dihydroorotate Dehydrogenase in complex with orotate===

-	Description: Leishmania major Dihydroorotate Dehydrogenase in complex with orotate

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Jun 10 17~~:57:~~56 2009~~''	+	==About this Structure==
		+	3GZ3 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GZ3 OCA].
		+	[[Category: Dihydroorotate oxidase]]
		+	[[Category: Leishmania major]]
		+	[[Category: Cordeiro, A T.]]
		+	[[Category: Feliciano, P R.]]
		+	[[Category: Nonato, M C.]]
		+	[[Category: Dhodh]]
		+	[[Category: Orotate]]
		+	[[Category: Oxidoreductase]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 28 11:03:16 2010''

OCA at 14:57, 10 June 2009

OCA — Wed, 10 Jun 2009 14:57:56 GMT

←Older revision		Revision as of 14:57, 10 June 2009
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3gz3 is ON HOLD	+	The entry 3gz3 is ON HOLD until Paper Publication

	Authors: Cordeiro, A.T., Feliciano, P.R., Nonato, M.C.		Authors: Cordeiro, A.T., Feliciano, P.R., Nonato, M.C.
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	Description: Leishmania major Dihydroorotate Dehydrogenase in complex with orotate		Description: Leishmania major Dihydroorotate Dehydrogenase in complex with orotate

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Apr 15~~ 10:00:13 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 10 17:57:56 2009''

OCA: New page: '''Unreleased structure''' The entry 3gz3 is ON HOLD Authors: Cordeiro, A.T., Feliciano, P.R., Nonato, M.C. Description: Leishmania major Dihydroorotate Dehydrogenase in complex with o...

OCA — Wed, 15 Apr 2009 07:00:13 GMT

New page: '''Unreleased structure''' The entry 3gz3 is ON HOLD Authors: Cordeiro, A.T., Feliciano, P.R., Nonato, M.C. Description: Leishmania major Dihydroorotate Dehydrogenase in complex with o...

New page

'''Unreleased structure'''

The entry 3gz3 is ON HOLD

Authors: Cordeiro, A.T., Feliciano, P.R., Nonato, M.C.

Description: Leishmania major Dihydroorotate Dehydrogenase in complex with orotate

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 15 10:00:13 2009''