3h2k - Revision history

OCA at 15:47, 1 November 2023

OCA — Wed, 01 Nov 2023 15:47:03 GMT

←Older revision		Revision as of 15:47, 1 November 2023
Line 3:		Line 3:
	<StructureSection load='3h2k' size='340' side='right'caption='[[3h2k]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='3h2k' size='340' side='right'caption='[[3h2k]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3h2k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Xanoo Xanoo~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H2K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H2K FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3h2k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae Xanthomonas oryzae pv. oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H2K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H2K FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=BOG:B~~-~~OCTYLGLUCOSIDE'>BOG</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.1Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max~~-~~height: 3em;~~'>~~[[3h2g\|3h2g]], [[3h2h\|3h2h]], [[3h2i\|3h2i]], [[3h2j\|3h2j]]~~</~~div~~>~~</td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LipA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=64187 XANOO])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h2k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h2k OCA], [https://pdbe.org/3h2k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h2k RCSB], [https://www.ebi.ac.uk/pdbsum/3h2k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h2k ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h2k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h2k OCA], [https://pdbe.org/3h2k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h2k RCSB], [https://www.ebi.ac.uk/pdbsum/3h2k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h2k ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q5H5J0_XANOR Q5H5J0_XANOR]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 33:		Line 34:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Xanoo]]
-	[[Category: Aparna, G]]
-	[[Category: Chatterjee, A]]
-	[[Category: Sankaranarayanan, R]]
-	[[Category: Sonti, R V]]
-	[[Category: Cell wall degrading enzyme]]
-	[[Category: Esterase]]
-	[[Category: Glycoside binding]]
-	[[Category: Hydrolase]]
-	[[Category: Innate immune response]]
-	[[Category: Pathogenesis]]
-	[[Category: Rice]]
-	[[Category: Virulence]]
	[[Category: Xanthomonas oryzae pv. oryzae]]		[[Category: Xanthomonas oryzae pv. oryzae]]
		+	[[Category: Aparna G]]
		+	[[Category: Chatterjee A]]
		+	[[Category: Sankaranarayanan R]]
		+	[[Category: Sonti RV]]

OCA at 08:01, 16 March 2022

OCA — Wed, 16 Mar 2022 08:01:27 GMT

←Older revision		Revision as of 08:01, 16 March 2022
Line 1:		Line 1:

	==Crystal structure of a ligand-bound form of the rice cell wall degrading esterase LipA from Xanthomonas oryzae==		==Crystal structure of a ligand-bound form of the rice cell wall degrading esterase LipA from Xanthomonas oryzae==
-	<StructureSection load='3h2k' size='340' side='right' caption='[[3h2k]], [[Resolution\|resolution]] 2.10Å' scene=''>	+	<StructureSection load='3h2k' size='340' side='right'caption='[[3h2k]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3h2k]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Xanoo Xanoo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H2K OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3H2K FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3h2k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanoo Xanoo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H2K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H2K FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3h2g\|3h2g]], [[3h2h\|3h2h]], [[3h2i\|3h2i]], [[3h2j\|3h2j]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3h2g\|3h2g]], [[3h2h\|3h2h]], [[3h2i\|3h2i]], [[3h2j\|3h2j]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LipA ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=64187 XANOO])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LipA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=64187 XANOO])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3h2k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h2k OCA], [~~http~~://pdbe.org/3h2k PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3h2k RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3h2k PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3h2k ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h2k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h2k OCA], [https://pdbe.org/3h2k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h2k RCSB], [https://www.ebi.ac.uk/pdbsum/3h2k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h2k ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 32:		Line 32:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Xanoo]]		[[Category: Xanoo]]
	[[Category: Aparna, G]]		[[Category: Aparna, G]]

OCA at 05:33, 7 December 2018

OCA — Fri, 07 Dec 2018 05:33:33 GMT

←Older revision		Revision as of 05:33, 7 December 2018
Line 13:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h2/3h2k_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h2/3h2k_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 20:34, 9 December 2016

OCA — Fri, 09 Dec 2016 20:34:02 GMT

←Older revision		Revision as of 20:34, 9 December 2016
Line 1:		Line 1:
		+
	==Crystal structure of a ligand-bound form of the rice cell wall degrading esterase LipA from Xanthomonas oryzae==		==Crystal structure of a ligand-bound form of the rice cell wall degrading esterase LipA from Xanthomonas oryzae==
	<StructureSection load='3h2k' size='340' side='right' caption='[[3h2k]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='3h2k' size='340' side='right' caption='[[3h2k]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3h2k]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Xanthomonas_oryzae_pv._oryzae Xanthomonas oryzae pv. oryzae~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H2K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3H2K FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3h2k]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xanoo Xanoo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H2K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3H2K FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3h2g\|3h2g]], [[3h2h\|3h2h]], [[3h2i\|3h2i]], [[3h2j\|3h2j]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3h2g\|3h2g]], [[3h2h\|3h2h]], [[3h2i\|3h2i]], [[3h2j\|3h2j]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LipA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=64187 ~~Xanthomonas oryzae pv. oryzae~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LipA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=64187 XANOO])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3h2k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h2k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3h2k RCSB], [http://www.ebi.ac.uk/pdbsum/3h2k PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3h2k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h2k OCA], [http://pdbe.org/3h2k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3h2k RCSB], [http://www.ebi.ac.uk/pdbsum/3h2k PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3h2k ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 16:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h2k ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 26:		Line 27:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3h2k" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Xanthomonas oryzae pv. oryzae~~]]	+	[[Category: Xanoo]]
	[[Category: Aparna, G]]		[[Category: Aparna, G]]
	[[Category: Chatterjee, A]]		[[Category: Chatterjee, A]]
Line 43:		Line 45:
	[[Category: Rice]]		[[Category: Rice]]
	[[Category: Virulence]]		[[Category: Virulence]]
		+	[[Category: Xanthomonas oryzae pv. oryzae]]

OCA at 09:08, 8 December 2014

OCA — Mon, 08 Dec 2014 09:08:10 GMT

←Older revision		Revision as of 09:08, 8 December 2014
Line 1:		Line 1:
-	[[~~Image:~~3h2k.~~png~~\|~~left~~\|200px]]	+	==Crystal structure of a ligand-bound form of the rice cell wall degrading esterase LipA from Xanthomonas oryzae==
		+	<StructureSection load='3h2k' size='340' side='right' caption='[[3h2k]], [[Resolution\|resolution]] 2.10Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3h2k]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae Xanthomonas oryzae pv. oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H2K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3H2K FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3h2g\|3h2g]], [[3h2h\|3h2h]], [[3h2i\|3h2i]], [[3h2j\|3h2j]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LipA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=64187 Xanthomonas oryzae pv. oryzae])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3h2k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h2k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3h2k RCSB], [http://www.ebi.ac.uk/pdbsum/3h2k PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h2/3h2k_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Xanthomonas oryzae pv oryzae (Xoo) causes bacterial blight, a serious disease of rice (Oryza sativa). LipA is a secretory virulence factor of Xoo, implicated in degradation of rice cell walls and the concomitant elicitation of innate immune responses, such as callose deposition and programmed cell death. Here, we present the high-resolution structural characterization of LipA that reveals an all-helical ligand binding module as a distinct functional attachment to the canonical hydrolase catalytic domain. We demonstrate that the enzyme binds to a glycoside ligand through a rigid pocket comprising distinct carbohydrate-specific and acyl chain recognition sites where the catalytic triad is situated 15 A from the anchored carbohydrate. Point mutations disrupting the carbohydrate anchor site or blocking the pocket, even at a considerable distance from the enzyme active site, can abrogate in planta LipA function, exemplified by loss of both virulence and the ability to elicit host defense responses. A high conservation of the module across genus Xanthomonas emphasizes the significance of this unique plant cell wall-degrading function for this important group of plant pathogenic bacteria. A comparison with the related structural families illustrates how a typical lipase is recruited to act on plant cell walls to promote virulence, thus providing a remarkable example of the emergence of novel functions around existing scaffolds for increased proficiency of pathogenesis during pathogen-plant coevolution.

-	~~{{STRUCTURE_3h2k\| PDB=3h2k \| SCENE= }}~~	+	A cell wall-degrading esterase of Xanthomonas oryzae requires a unique substrate recognition module for pathogenesis on rice.,Aparna G, Chatterjee A, Sonti RV, Sankaranarayanan R Plant Cell. 2009 Jun;21(6):1860-73. Epub 2009 Jun 12. PMID:19525415<ref>PMID:19525415</ref>

-	~~===Crystal structure of~~ a ~~ligand-bound form~~ of the ~~rice cell wall degrading esterase LipA from Xanthomonas oryzae===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_19525415}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[3h2k]] is a 1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Xanthomonas_oryzae_pv~~.~~_oryzae Xanthomonas oryzae pv. oryzae]. Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3H2K OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:019525415<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Xanthomonas oryzae pv. oryzae]]		[[Category: Xanthomonas oryzae pv. oryzae]]
-	[[Category: Aparna, G.]]	+	[[Category: Aparna, G]]
-	[[Category: Chatterjee, A.]]	+	[[Category: Chatterjee, A]]
-	[[Category: Sankaranarayanan, R.]]	+	[[Category: Sankaranarayanan, R]]
-	[[Category: Sonti, R V.]]	+	[[Category: Sonti, R V]]
	[[Category: Cell wall degrading enzyme]]		[[Category: Cell wall degrading enzyme]]
	[[Category: Esterase]]		[[Category: Esterase]]
Line 25:		Line 43:
	[[Category: Rice]]		[[Category: Rice]]
	[[Category: Virulence]]		[[Category: Virulence]]
-	[[Category: Xanthomonas oryzae pv. oryzae]]

OCA: Protected "3h2k" [edit=sysop:move=sysop]

OCA — Wed, 27 Feb 2013 15:41:54 GMT

Protected "3h2k" [edit=sysop:move=sysop]

←Older revision

Revision as of 15:41, 27 February 2013

OCA at 15:41, 27 February 2013

OCA — Wed, 27 Feb 2013 15:41:49 GMT

←Older revision		Revision as of 15:41, 27 February 2013
Line 1:		Line 1:
-	~~{{Seed}}~~	+	[[Image:3h2k.png\|left\|200px]]
-	[[Image:3h2k.~~jpg~~\|left\|200px]]	+

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3h2k", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3h2k\| PDB=3h2k \| SCENE= }}		{{STRUCTURE_3h2k\| PDB=3h2k \| SCENE= }}

	===Crystal structure of a ligand-bound form of the rice cell wall degrading esterase LipA from Xanthomonas oryzae===		===Crystal structure of a ligand-bound form of the rice cell wall degrading esterase LipA from Xanthomonas oryzae===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_19525415}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 19525415 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_19525415}}		{{ABSTRACT_PUBMED_19525415}}

	==About this Structure==		==About this Structure==
-	~~3H2K~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae Xanthomonas oryzae pv. oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H2K OCA].	+	[[3h2k]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae Xanthomonas oryzae pv. oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H2K OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~19525415~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:019525415</ref><references group="xtra"/>
	[[Category: Xanthomonas oryzae pv. oryzae]]		[[Category: Xanthomonas oryzae pv. oryzae]]
	[[Category: Aparna, G.]]		[[Category: Aparna, G.]]
Line 30:		Line 18:
	[[Category: Sonti, R V.]]		[[Category: Sonti, R V.]]
	[[Category: Cell wall degrading enzyme]]		[[Category: Cell wall degrading enzyme]]
-	[[Category: Crystal structure]]
	[[Category: Esterase]]		[[Category: Esterase]]
	[[Category: Glycoside binding]]		[[Category: Glycoside binding]]
Line 39:		Line 26:
	[[Category: Virulence]]		[[Category: Virulence]]
	[[Category: Xanthomonas oryzae pv. oryzae]]		[[Category: Xanthomonas oryzae pv. oryzae]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 19 13:09:49 2009''

OCA at 10:09, 19 August 2009

OCA — Wed, 19 Aug 2009 10:09:53 GMT

←Older revision		Revision as of 10:09, 19 August 2009
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3h2k.jpg\|left\|200px]]

-	The ~~entry 3h2k~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3h2k", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3h2k\| PDB=3h2k \| SCENE= }}

-	~~Authors: Aparna, G., Chatterjee, A., Sonti, R.V., Sankaranarayanan, R.~~	+	===Crystal structure of a ligand-bound form of the rice cell wall degrading esterase LipA from Xanthomonas oryzae===

-	Description: Crystal structure of a ligand-bound form of the rice cell wall degrading esterase LipA from Xanthomonas oryzae

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Thu Apr 30 08~~:46:49 2009''	+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_19525415}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 19525415 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_19525415}}
		+
		+	==About this Structure==
		+	3H2K is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae Xanthomonas oryzae pv. oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H2K OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:19525415</ref><references group="xtra"/>
		+	[[Category: Xanthomonas oryzae pv. oryzae]]
		+	[[Category: Aparna, G.]]
		+	[[Category: Chatterjee, A.]]
		+	[[Category: Sankaranarayanan, R.]]
		+	[[Category: Sonti, R V.]]
		+	[[Category: Cell wall degrading enzyme]]
		+	[[Category: Crystal structure]]
		+	[[Category: Esterase]]
		+	[[Category: Glycoside binding]]
		+	[[Category: Hydrolase]]
		+	[[Category: Innate immune response]]
		+	[[Category: Pathogenesis]]
		+	[[Category: Rice]]
		+	[[Category: Virulence]]
		+	[[Category: Xanthomonas oryzae pv. oryzae]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 19 13:09:49 2009''

OCA at 05:46, 30 April 2009

OCA — Thu, 30 Apr 2009 05:46:49 GMT

←Older revision		Revision as of 05:46, 30 April 2009
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3h2k is ON HOLD	+	The entry 3h2k is ON HOLD until Paper Publication

	Authors: Aparna, G., Chatterjee, A., Sonti, R.V., Sankaranarayanan, R.		Authors: Aparna, G., Chatterjee, A., Sonti, R.V., Sankaranarayanan, R.
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	Description: Crystal structure of a ligand-bound form of the rice cell wall degrading esterase LipA from Xanthomonas oryzae		Description: Crystal structure of a ligand-bound form of the rice cell wall degrading esterase LipA from Xanthomonas oryzae

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed~~ Apr ~~22 11~~:10:07 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr 30 08:46:49 2009''

OCA: New page: '''Unreleased structure''' The entry 3h2k is ON HOLD Authors: Aparna, G., Chatterjee, A., Sonti, R.V., Sankaranarayanan, R. Description: Crystal structure of a ligand-bound form of the...

OCA — Wed, 22 Apr 2009 08:10:07 GMT

New page: '''Unreleased structure''' The entry 3h2k is ON HOLD Authors: Aparna, G., Chatterjee, A., Sonti, R.V., Sankaranarayanan, R. Description: Crystal structure of a ligand-bound form of the...

New page

'''Unreleased structure'''

The entry 3h2k is ON HOLD

Authors: Aparna, G., Chatterjee, A., Sonti, R.V., Sankaranarayanan, R.

Description: Crystal structure of a ligand-bound form of the rice cell wall degrading esterase LipA from Xanthomonas oryzae

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 22 11:10:07 2009''