3hrw - Revision history

OCA at 15:53, 1 November 2023

OCA — Wed, 01 Nov 2023 15:53:49 GMT

←Older revision		Revision as of 15:53, 1 November 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3hrw]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HRW FirstGlance]. <br>		<table><tr><td colspan='2'>[[3hrw]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HRW FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.8Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hrw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hrw OCA], [https://pdbe.org/3hrw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hrw RCSB], [https://www.ebi.ac.uk/pdbsum/3hrw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hrw ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hrw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hrw OCA], [https://pdbe.org/3hrw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hrw RCSB], [https://www.ebi.ac.uk/pdbsum/3hrw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hrw ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/HBA_MOUSE HBA_MOUSE~~]] Involved in oxygen transport from the lung to the various peripheral tissues. [[https://www.uniprot.org/uniprot/HBB1_MOUSE HBB1_MOUSE]~~] Involved in oxygen transport from the lung to the various peripheral tissues.	+	[https://www.uniprot.org/uniprot/HBA_MOUSE HBA_MOUSE] Involved in oxygen transport from the lung to the various peripheral tissues.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 37:		Line 38:
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
-	[[Category: Ponnuswamy~~, M N~~]]	+	[[Category: Ponnuswamy MN]]
-	[[Category: Ramesh, P]]	+	[[Category: Ramesh P]]
-	[[Category: Sundaresan~~, S S]]~~	+	[[Category: Sundaresan SS]]
-	~~[[Category: Heme]]~~	+
-	~~[[Category: Iron]]~~	+
-	~~[[Category: Metal-binding]]~~	+
-	~~[[Category: Oxygen transport]]~~	+
-	~~[[Category: Phosphoprotein]]~~	+
-	~~[[Category: Polymorphism]]~~	+
-	~~[[Category: Transport~~]]	+

OCA at 08:26, 21 April 2021

OCA — Wed, 21 Apr 2021 08:26:17 GMT

←Older revision		Revision as of 08:26, 21 April 2021
Line 3:		Line 3:
	<StructureSection load='3hrw' size='340' side='right'caption='[[3hrw]], [[Resolution\|resolution]] 2.80Å' scene=''>		<StructureSection load='3hrw' size='340' side='right'caption='[[3hrw]], [[Resolution\|resolution]] 2.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3hrw]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=3HRW FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3hrw]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HRW FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=3hrw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hrw OCA], [~~http~~://pdbe.org/3hrw PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3hrw RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3hrw PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3hrw ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hrw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hrw OCA], [https://pdbe.org/3hrw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hrw RCSB], [https://www.ebi.ac.uk/pdbsum/3hrw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hrw ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/HBA_MOUSE HBA_MOUSE]] Involved in oxygen transport from the lung to the various peripheral tissues. [[~~http~~://www.uniprot.org/uniprot/HBB1_MOUSE HBB1_MOUSE]] Involved in oxygen transport from the lung to the various peripheral tissues.	+	[[https://www.uniprot.org/uniprot/HBA_MOUSE HBA_MOUSE]] Involved in oxygen transport from the lung to the various peripheral tissues. [[https://www.uniprot.org/uniprot/HBB1_MOUSE HBB1_MOUSE]] Involved in oxygen transport from the lung to the various peripheral tissues.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 19:		Line 19:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hrw ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hrw ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Mice (Mus musculus) are nocturnal small animals belonging to the rodent family that live in burrows, an environment in which significantly high CO2 levels prevail. It is expected that mouse hemoglobin (Hb) plays an important role in their adaptation to living in such a high-CO2 environment, while many other species cannot. In the present study, mouse Hb was purified and crystallized at a physiological pH of 7 in the orthorhombic space group P212121; the crystals diffracted to 2.8 A resolution. The primary amino-acid sequence and crystal structure of mouse Hb were compared with those of mammalian Hbs in order to investigate the structure-function relationship of mouse Hb. Differences were observed from guinea pig Hb in terms of amino-acid sequence and from cat Hb in overall structure (in terms of r.m.s.d.). The difference in r.m.s.d. from cat Hb may be due to the existence of the molecule in a conformation other than the R-state. Analysis of tertiary- and quaternary-structural features, the alpha1beta2 interface region and the heme environment without any ligands in all four heme groups showed that mouse methemoglobin is in an intermediate state between the R-state and the T-state that is much closer to the R-state conformation.
		+
		+	Crystal structure of hemoglobin from mouse (Mus musculus) compared with those from other small animals and humans.,Sundaresan SS, Ramesh P, Shobana N, Vinuchakkaravarthy T, Yasien S, Ponnuswamy MNG Acta Crystallogr F Struct Biol Commun. 2021 Apr 1;77(Pt 4):113-120. doi:, 10.1107/S2053230X2100306X. Epub 2021 Apr 1. PMID:33830076<ref>PMID:33830076</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 3hrw" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
	*[[Hemoglobin 3D structures\|Hemoglobin 3D structures]]		*[[Hemoglobin 3D structures\|Hemoglobin 3D structures]]
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 10:51, 16 September 2020

OCA — Wed, 16 Sep 2020 10:51:12 GMT

←Older revision		Revision as of 10:51, 16 September 2020
Line 1:		Line 1:

	==Crystal structure of hemoglobin from mouse (Mus musculus)at 2.8==		==Crystal structure of hemoglobin from mouse (Mus musculus)at 2.8==
-	<StructureSection load='3hrw' size='340' side='right' caption='[[3hrw]], [[Resolution\|resolution]] 2.80Å' scene=''>	+	<StructureSection load='3hrw' size='340' side='right'caption='[[3hrw]], [[Resolution\|resolution]] 2.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3hrw]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3HRW FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3hrw]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3HRW FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3hrw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hrw OCA], [http://pdbe.org/3hrw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3hrw RCSB], [http://www.ebi.ac.uk/pdbsum/3hrw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3hrw ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3hrw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hrw OCA], [http://pdbe.org/3hrw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3hrw RCSB], [http://www.ebi.ac.uk/pdbsum/3hrw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3hrw ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 24:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Ponnuswamy, M N]]		[[Category: Ponnuswamy, M N]]

OCA at 07:49, 12 December 2018

OCA — Wed, 12 Dec 2018 07:49:17 GMT

←Older revision		Revision as of 07:49, 12 December 2018
Line 1:		Line 1:
		+
	==Crystal structure of hemoglobin from mouse (Mus musculus)at 2.8==		==Crystal structure of hemoglobin from mouse (Mus musculus)at 2.8==
	<StructureSection load='3hrw' size='340' side='right' caption='[[3hrw]], [[Resolution\|resolution]] 2.80Å' scene=''>		<StructureSection load='3hrw' size='340' side='right' caption='[[3hrw]], [[Resolution\|resolution]] 2.80Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[3hrw]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HRW FirstGlance]. <br>		<table><tr><td colspan='2'>[[3hrw]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HRW FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hrw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hrw OCA], [http://pdbe.org/3hrw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3hrw RCSB], [http://www.ebi.ac.uk/pdbsum/3hrw PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hrw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hrw OCA], [http://pdbe.org/3hrw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3hrw RCSB], [http://www.ebi.ac.uk/pdbsum/3hrw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3hrw ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hr/3hrw_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hr/3hrw_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 32:		Line 33:
	[[Category: Oxygen transport]]		[[Category: Oxygen transport]]
	[[Category: Phosphoprotein]]		[[Category: Phosphoprotein]]
		+	[[Category: Polymorphism]]
	[[Category: Transport]]		[[Category: Transport]]

OCA at 18:36, 9 February 2016

OCA — Tue, 09 Feb 2016 18:36:45 GMT

←Older revision		Revision as of 18:36, 9 February 2016
Line 4:		Line 4:
	<table><tr><td colspan='2'>[[3hrw]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HRW FirstGlance]. <br>		<table><tr><td colspan='2'>[[3hrw]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HRW FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hrw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hrw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3hrw RCSB], [http://www.ebi.ac.uk/pdbsum/3hrw PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hrw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hrw OCA], [http://pdbe.org/3hrw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3hrw RCSB], [http://www.ebi.ac.uk/pdbsum/3hrw PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hrw ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

OCA at 08:43, 25 December 2014

OCA — Thu, 25 Dec 2014 08:43:44 GMT

←Older revision		Revision as of 08:43, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3hrw]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HRW FirstGlance]. <br>		<table><tr><td colspan='2'>[[3hrw]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HRW FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hrw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hrw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3hrw RCSB], [http://www.ebi.ac.uk/pdbsum/3hrw PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hrw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hrw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3hrw RCSB], [http://www.ebi.ac.uk/pdbsum/3hrw PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/HBA_MOUSE HBA_MOUSE]] Involved in oxygen transport from the lung to the various peripheral tissues. [[http://www.uniprot.org/uniprot/HBB1_MOUSE HBB1_MOUSE]] Involved in oxygen transport from the lung to the various peripheral tissues.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 22:		Line 24:
	</StructureSection>		</StructureSection>
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
-	[[Category: Ponnuswamy, M N.]]	+	[[Category: Ponnuswamy, M N]]
-	[[Category: Ramesh, P.]]	+	[[Category: Ramesh, P]]
-	[[Category: Sundaresan, S S.]]	+	[[Category: Sundaresan, S S]]
	[[Category: Heme]]		[[Category: Heme]]
	[[Category: Iron]]		[[Category: Iron]]

OCA at 12:58, 29 September 2014

OCA — Mon, 29 Sep 2014 12:58:57 GMT

←Older revision		Revision as of 12:58, 29 September 2014
Line 1:		Line 1:
-	~~[[Image:3hrw.png\|left\|200px]]~~	+	==Crystal structure of hemoglobin from mouse (Mus musculus)at 2.8==
-		+	<StructureSection load='3hrw' size='340' side='right' caption='[[3hrw]], [[Resolution\|resolution]] 2.80Å' scene=''>
-	~~{{STRUCTURE_3hrw\| PDB=3hrw \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[3hrw]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HRW FirstGlance]. <br>
-	===Crystal structure of hemoglobin from mouse (Mus musculus)at 2.8===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene><br>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hrw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hrw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3hrw RCSB], [http://www.ebi.ac.uk/pdbsum/3hrw PDBsum]</span></td></tr>
-		+	<table>
-	==~~About this Structure~~==	+	== Evolutionary Conservation ==
-	[[3hrw]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA].	+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hr/3hrw_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>

	==See Also==		==See Also==
-	*[[Hemoglobin\|Hemoglobin]]	+	*[[Hemoglobin 3D structures\|Hemoglobin 3D structures]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Ponnuswamy, M N.]]		[[Category: Ponnuswamy, M N.]]

OCA at 14:45, 20 October 2012

OCA — Sat, 20 Oct 2012 14:45:25 GMT

←Older revision		Revision as of 14:45, 20 October 2012
Line 7:		Line 7:

	==About this Structure==		==About this Structure==
-	[[3hrw]] is a 4 chain structure ~~of [[Hemoglobin]]~~ with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA].	+	[[3hrw]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA].

	==See Also==		==See Also==

OCA: Protected "3hrw" [edit=sysop:move=sysop]

OCA — Thu, 26 Jul 2012 16:08:51 GMT

Protected "3hrw" [edit=sysop:move=sysop]

←Older revision

Revision as of 16:08, 26 July 2012

OCA at 16:08, 26 July 2012

OCA — Thu, 26 Jul 2012 16:08:49 GMT

←Older revision		Revision as of 16:08, 26 July 2012
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-	~~{{Seed}}~~	+	[[Image:3hrw.png\|left\|200px]]
-	[[Image:3hrw.~~jpg~~\|left\|200px]]	+

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3hrw", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3hrw\| PDB=3hrw \| SCENE= }}		{{STRUCTURE_3hrw\| PDB=3hrw \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~3HRW~~ is a 4 ~~chains~~ structure of ~~sequences~~ from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA].	+	[[3hrw]] is a 4 chain structure of [[Hemoglobin]] with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HRW OCA].
		+
		+	==See Also==
		+	*[[Hemoglobin\|Hemoglobin]]
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Ponnuswamy, M N.]]		[[Category: Ponnuswamy, M N.]]
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	[[Category: Oxygen transport]]		[[Category: Oxygen transport]]
	[[Category: Phosphoprotein]]		[[Category: Phosphoprotein]]
-	[[Category: Polymorphism]]
	[[Category: Transport]]		[[Category: Transport]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jun 25 11:28:10 2009''