3huw - Revision history

OCA: Redirecting to 4v6a

OCA — Wed, 10 Dec 2014 15:22:21 GMT

Redirecting to 4v6a

←Older revision		Revision as of 15:22, 10 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3huw\| PDB=3huw \| SCENE= }}~~	+	#REDIRECT [[4v6a]] This PDB entry is obsolete and replaced by 4v6a
-	~~===Structure of EF-P bound to the 70S ribosome; THIS FILE CONTAINS THE 30S SUBUNIT, MRNA, P-SITE TRNA AND EF-P FOR MOLECULE I.===~~	+
-	~~{{ABSTRACT_PUBMED_19696344}}~~	+
-		+
-	~~==Function==~~	+
-	[[~~http://www.uniprot.org/uniprot/RS11_THET8 RS11_THET8~~]] Located on the upper part of the platform of the 30S subunit, where it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome, where it interacts both with the Shine-Dalgarno helix and mRNA.[HAMAP-Rule:MF_01310] [[http://www.uniprot.org/uniprot/RSHX_THET8 RSHX_THET8]] Binds at the top of the head of the 30S subunit. It stabilizes a number of different RNA elements and thus is important for subunit structure. [[http://www.uniprot.org/uniprot/RS7_THET8 RS7_THET8]] One of the primary rRNA binding proteins, it binds directly to 3'-end of the 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center. Binds mRNA and the E site tRNA blocking its exit path in the ribosome. This blockage implies that this section of the ribosome must be able to move to release the deacetylated tRNA.[HAMAP-Rule:MF_00480_B] [[http://www.uniprot.org/uniprot/RS2_THET8 RS2_THET8]] Spans the head-body hinge region of the 30S subunit. Is loosely associated with the 30S subunit.[HAMAP-Rule:MF_00291_B] [[http://www.uniprot.org/uniprot/RS17_THET8 RS17_THET8]] One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform and body of the 30S subunit by bringing together and stabilizing interactions between several different RNA helices. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.[HAMAP-Rule:MF_01345] Deletion of the protein leads to an increased generation time and a temperature-sensitive phenotype.[HAMAP-Rule:MF_01345] [[http://www.uniprot.org/uniprot/EFP_THET8 EFP_THET8]] Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase (By similarity). [[http://www.uniprot.org/uniprot/RS18_THET8 RS18_THET8]] Located on the back of the platform of the 30S subunit where it stabilizes the close packing of several RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome, where it probably interacts with the Shine-Dalgarno helix.[HAMAP-Rule:MF_00270] [[http://www.uniprot.org/uniprot/RS13_THET8 RS13_THET8]] Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome structure it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the top of the two subunits; these bridges are in contact with the A site and P site tRNAs respectively and are implicated in movement during ribosome translocation. Separately contacts the tRNAs in the A and P sites.[HAMAP-Rule:MF_01315] [[http://www.uniprot.org/uniprot/RS16_THET8 RS16_THET8]] Binds to the lower part of the body of the 30S subunit, where it stabilizes two of its domains.[HAMAP-Rule:MF_00385] [[http://www.uniprot.org/uniprot/RS6_THET8 RS6_THET8]] Located on the outer edge of the platform on the body of the 30S subunit.[HAMAP-Rule:MF_00360] [[http://www.uniprot.org/uniprot/RS3_THET8 RS3_THET8]] Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.[HAMAP-Rule:MF_01309_B] [[http://www.uniprot.org/uniprot/RS9_THET8 RS9_THET8]] Part of the top of the head of the 30S subunit. The C-terminal region penetrates the head emerging in the P-site where it contacts tRNA.[HAMAP-Rule:MF_00532_B] [[http://www.uniprot.org/uniprot/RS12_THET8 RS12_THET8]] With S4 and S5 plays an important role in translational accuracy (By similarity).[HAMAP-Rule:MF_00403_B] Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.[HAMAP-Rule:MF_00403_B] [[http://www.uniprot.org/uniprot/RS14Z_THET8 RS14Z_THET8]] Required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site (By similarity). Binds 16S rRNA in center of the 30S subunit head.[HAMAP-Rule:MF_01364_B] [[http://www.uniprot.org/uniprot/RS15_THET8 RS15_THET8]] One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA (By similarity).[HAMAP-Rule:MF_01343] Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.[HAMAP-Rule:MF_01343] [[http://www.uniprot.org/uniprot/RS20_THET8 RS20_THET8]] One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the bottom of the body of the 30S subunit, by binding to several RNA helices of the 16S rRNA.[HAMAP-Rule:MF_00500] [[http://www.uniprot.org/uniprot/RS8_THET8 RS8_THET8]] One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit central domain. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.[HAMAP-Rule:MF_01302_B] [[http://www.uniprot.org/uniprot/RS4_THET8 RS4_THET8]] One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the body and platform of the 30S subunit. Binds mRNA in the 70S ribosome, positioning it for translation.[HAMAP-Rule:MF_01306_B] [[http://www.uniprot.org/uniprot/RS10_THET8 RS10_THET8]] Part of the top of the 30S subunit head.[HAMAP-Rule:MF_00508] [[http://www.uniprot.org/uniprot/RS19_THET8 RS19_THET8]] Located at the top of the head of the 30S subunit, extending towards the 50S subunit, which it may contact in the 70S complex. Contacts several RNA helices of the 16S rRNA.[HAMAP-Rule:MF_00531] [[http://www.uniprot.org/uniprot/RS5_THET8 RS5_THET8]] With S4 and S12 plays an important role in translational accuracy (By similarity).[HAMAP-Rule:MF_01307_B] Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Binds mRNA in the 70S ribosome, positioning it for translation.[HAMAP-Rule:MF_01307_B]	+
-		+
-	~~==About this Structure==~~	+
-	~~[[3huw]]~~ is ~~a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli], [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]~~ and [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. The January 2010 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''70S Ribosomes'' by David Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2010_1 10.2210/rcsb_pdb/mom_2010_1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HUW OCA].	+
-		+
-	~~==See Also==~~	+
-	*[[Elongation factor\|Elongation factor]]	+
-	*[[Ribosomal protein S10\|Ribosomal protein S10]]	+
-	*[[Ribosomal protein S11\|Ribosomal protein S11]]	+
-	*[[Ribosomal protein S12\|Ribosomal protein S12]]	+
-	*[[Ribosomal protein S13\|Ribosomal protein S13]]	+
-	*[[Ribosomal protein S14\|Ribosomal protein S14]]	+
-	*[[Ribosomal protein S15\|Ribosomal protein S15]]	+
-	*[[Ribosomal protein S16\|Ribosomal protein S16]]	+
-	*[[Ribosomal protein S17\|Ribosomal protein S17]]	+
-	*[[Ribosomal protein S18\|Ribosomal protein S18]]	+
-	*[[Ribosomal protein S19\|Ribosomal protein S19]]	+
-	*[[Ribosomal protein S2\|Ribosomal protein S2]]	+
-	*[[Ribosomal protein S20\|Ribosomal protein S20]]	+
-	*[[Ribosomal protein S3\|Ribosomal protein S3]]	+
-	*[[Ribosomal protein S4\|Ribosomal protein S4]]	+
-	*[[Ribosomal protein S5\|Ribosomal protein S5]]	+
-	*[[Ribosomal protein S6\|Ribosomal protein S6]]	+
-	*[[Ribosomal protein S7\|Ribosomal protein S7]]	+
-	*[[Ribosomal protein S8\|Ribosomal protein S8]]	+
-	*[[Ribosomal protein S9\|Ribosomal protein S9]]	+
-	*[[Ribosomal protein THX\|Ribosomal protein THX]]	+
-	*[[Ribosome\|Ribosome]]	+
-		+
-	~~==Reference==~~	+
-	~~<ref group="xtra">PMID:019696344</ref><references group="xtra"/><references/>~~	+
-	~~[[Category: 70S Ribosomes]]~~	+
-	~~[[Category: Escherichia coli]]~~	+
-	~~[[Category: RCSB PDB Molecule of the Month]]~~	+
-	~~[[Category: Thermus thermophilus]]~~	+
-	~~[[Category: Thermus thermophilus hb8]]~~	+
-	~~[[Category: Blaha, G.]]~~	+
-	~~[[Category: Stanley, R E.]]~~	+
-	~~[[Category: Elongation factor]]~~	+
-	~~[[Category: Initiation]]~~	+
-	~~[[Category: L1-stalk]]~~	+
-	~~[[Category: Ribosome]]~~	+
-	~~[[Category: Translation]]~~	+

OCA at 00:21, 4 April 2013

OCA — Thu, 04 Apr 2013 00:21:06 GMT

←Older revision		Revision as of 00:21, 4 April 2013
Line 1:		Line 1:
-	[[Image:3huw.png\|left\|200px]]
-
	{{STRUCTURE_3huw\| PDB=3huw \| SCENE= }}		{{STRUCTURE_3huw\| PDB=3huw \| SCENE= }}
-
	===Structure of EF-P bound to the 70S ribosome; THIS FILE CONTAINS THE 30S SUBUNIT, MRNA, P-SITE TRNA AND EF-P FOR MOLECULE I.===		===Structure of EF-P bound to the 70S ribosome; THIS FILE CONTAINS THE 30S SUBUNIT, MRNA, P-SITE TRNA AND EF-P FOR MOLECULE I.===
		+	{{ABSTRACT_PUBMED_19696344}}

-	~~{{ABSTRACT_PUBMED_19696344}}~~	+	==Function==
		+	[[http://www.uniprot.org/uniprot/RS11_THET8 RS11_THET8]] Located on the upper part of the platform of the 30S subunit, where it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome, where it interacts both with the Shine-Dalgarno helix and mRNA.[HAMAP-Rule:MF_01310] [[http://www.uniprot.org/uniprot/RSHX_THET8 RSHX_THET8]] Binds at the top of the head of the 30S subunit. It stabilizes a number of different RNA elements and thus is important for subunit structure. [[http://www.uniprot.org/uniprot/RS7_THET8 RS7_THET8]] One of the primary rRNA binding proteins, it binds directly to 3'-end of the 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center. Binds mRNA and the E site tRNA blocking its exit path in the ribosome. This blockage implies that this section of the ribosome must be able to move to release the deacetylated tRNA.[HAMAP-Rule:MF_00480_B] [[http://www.uniprot.org/uniprot/RS2_THET8 RS2_THET8]] Spans the head-body hinge region of the 30S subunit. Is loosely associated with the 30S subunit.[HAMAP-Rule:MF_00291_B] [[http://www.uniprot.org/uniprot/RS17_THET8 RS17_THET8]] One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform and body of the 30S subunit by bringing together and stabilizing interactions between several different RNA helices. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.[HAMAP-Rule:MF_01345] Deletion of the protein leads to an increased generation time and a temperature-sensitive phenotype.[HAMAP-Rule:MF_01345] [[http://www.uniprot.org/uniprot/EFP_THET8 EFP_THET8]] Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase (By similarity). [[http://www.uniprot.org/uniprot/RS18_THET8 RS18_THET8]] Located on the back of the platform of the 30S subunit where it stabilizes the close packing of several RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome, where it probably interacts with the Shine-Dalgarno helix.[HAMAP-Rule:MF_00270] [[http://www.uniprot.org/uniprot/RS13_THET8 RS13_THET8]] Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome structure it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the top of the two subunits; these bridges are in contact with the A site and P site tRNAs respectively and are implicated in movement during ribosome translocation. Separately contacts the tRNAs in the A and P sites.[HAMAP-Rule:MF_01315] [[http://www.uniprot.org/uniprot/RS16_THET8 RS16_THET8]] Binds to the lower part of the body of the 30S subunit, where it stabilizes two of its domains.[HAMAP-Rule:MF_00385] [[http://www.uniprot.org/uniprot/RS6_THET8 RS6_THET8]] Located on the outer edge of the platform on the body of the 30S subunit.[HAMAP-Rule:MF_00360] [[http://www.uniprot.org/uniprot/RS3_THET8 RS3_THET8]] Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.[HAMAP-Rule:MF_01309_B] [[http://www.uniprot.org/uniprot/RS9_THET8 RS9_THET8]] Part of the top of the head of the 30S subunit. The C-terminal region penetrates the head emerging in the P-site where it contacts tRNA.[HAMAP-Rule:MF_00532_B] [[http://www.uniprot.org/uniprot/RS12_THET8 RS12_THET8]] With S4 and S5 plays an important role in translational accuracy (By similarity).[HAMAP-Rule:MF_00403_B] Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.[HAMAP-Rule:MF_00403_B] [[http://www.uniprot.org/uniprot/RS14Z_THET8 RS14Z_THET8]] Required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site (By similarity). Binds 16S rRNA in center of the 30S subunit head.[HAMAP-Rule:MF_01364_B] [[http://www.uniprot.org/uniprot/RS15_THET8 RS15_THET8]] One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA (By similarity).[HAMAP-Rule:MF_01343] Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.[HAMAP-Rule:MF_01343] [[http://www.uniprot.org/uniprot/RS20_THET8 RS20_THET8]] One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the bottom of the body of the 30S subunit, by binding to several RNA helices of the 16S rRNA.[HAMAP-Rule:MF_00500] [[http://www.uniprot.org/uniprot/RS8_THET8 RS8_THET8]] One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit central domain. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.[HAMAP-Rule:MF_01302_B] [[http://www.uniprot.org/uniprot/RS4_THET8 RS4_THET8]] One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the body and platform of the 30S subunit. Binds mRNA in the 70S ribosome, positioning it for translation.[HAMAP-Rule:MF_01306_B] [[http://www.uniprot.org/uniprot/RS10_THET8 RS10_THET8]] Part of the top of the 30S subunit head.[HAMAP-Rule:MF_00508] [[http://www.uniprot.org/uniprot/RS19_THET8 RS19_THET8]] Located at the top of the head of the 30S subunit, extending towards the 50S subunit, which it may contact in the 70S complex. Contacts several RNA helices of the 16S rRNA.[HAMAP-Rule:MF_00531] [[http://www.uniprot.org/uniprot/RS5_THET8 RS5_THET8]] With S4 and S12 plays an important role in translational accuracy (By similarity).[HAMAP-Rule:MF_01307_B] Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Binds mRNA in the 70S ribosome, positioning it for translation.[HAMAP-Rule:MF_01307_B]

	==About this Structure==		==About this Structure==
Line 35:		Line 34:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:019696344</ref><references group="xtra"/>	+	<ref group="xtra">PMID:019696344</ref><references group="xtra"/><references/>
	[[Category: 70S Ribosomes]]		[[Category: 70S Ribosomes]]
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]

OCA at 13:02, 20 October 2012

OCA — Sat, 20 Oct 2012 13:02:23 GMT

←Older revision		Revision as of 13:02, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[3huw]] is a 24 chain structure of [[Ribosomal protein S10]], [[Ribosomal protein S11]], [[Ribosomal protein S12]], [[Ribosomal protein S13]], [[Ribosomal protein S14]], [[Ribosomal protein S15]], [[Ribosomal protein S16]], [[Ribosomal protein S17]], [[Ribosomal protein S18]], [[Ribosomal protein S19]], [[Ribosomal protein S2]], [[Ribosomal protein S20]], [[Ribosomal protein S3]], [[Ribosomal protein S4]], [[Ribosomal protein S5]], [[Ribosomal protein S6]], [[Ribosomal protein S7]], [[Ribosomal protein S8]], [[Ribosomal protein S9]], [[Ribosomal protein THX]] and [[Ribosome]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli], [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus] and [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. The January 2010 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''70S Ribosomes'' by David Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2010_1 10.2210/rcsb_pdb/mom_2010_1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HUW OCA].	+	[[3huw]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli], [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus] and [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. The January 2010 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''70S Ribosomes'' by David Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2010_1 10.2210/rcsb_pdb/mom_2010_1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HUW OCA].

	==See Also==		==See Also==
		+	*[[Elongation factor\|Elongation factor]]
	*[[Ribosomal protein S10\|Ribosomal protein S10]]		*[[Ribosomal protein S10\|Ribosomal protein S10]]
	*[[Ribosomal protein S11\|Ribosomal protein S11]]		*[[Ribosomal protein S11\|Ribosomal protein S11]]

OCA at 10:44, 26 July 2012

OCA — Thu, 26 Jul 2012 10:44:15 GMT

←Older revision		Revision as of 10:44, 26 July 2012
Line 1:		Line 1:
	[[Image:3huw.png\|left\|200px]]		[[Image:3huw.png\|left\|200px]]

-	<!--
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	{{STRUCTURE_3huw\| PDB=3huw \| SCENE= }}		{{STRUCTURE_3huw\| PDB=3huw \| SCENE= }}

	===Structure of EF-P bound to the 70S ribosome; THIS FILE CONTAINS THE 30S SUBUNIT, MRNA, P-SITE TRNA AND EF-P FOR MOLECULE I.===		===Structure of EF-P bound to the 70S ribosome; THIS FILE CONTAINS THE 30S SUBUNIT, MRNA, P-SITE TRNA AND EF-P FOR MOLECULE I.===

-
-	<!--
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	{{ABSTRACT_PUBMED_19696344}}		{{ABSTRACT_PUBMED_19696344}}

	==About this Structure==		==About this Structure==
-	[[3huw]] is a 24 chain structure of [[Ribosomal protein S10]], [[Ribosomal protein S11]], [[Ribosomal protein S12]], [[Ribosomal protein S13]], [[Ribosomal protein S15]], [[Ribosomal protein S17]], [[Ribosomal protein S2]], [[Ribosomal protein S20]], [[Ribosomal protein S3]], [[Ribosomal protein S4]], [[Ribosomal protein THX]] and [[Ribosome]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. The January 2010 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''70S Ribosomes'' by David Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2010_1 10.2210/rcsb_pdb/mom_2010_1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HUW OCA].	+	[[3huw]] is a 24 chain structure of [[Ribosomal protein S10]], [[Ribosomal protein S11]], [[Ribosomal protein S12]], [[Ribosomal protein S13]], [[Ribosomal protein S14]], [[Ribosomal protein S15]], [[Ribosomal protein S16]], [[Ribosomal protein S17]], [[Ribosomal protein S18]], [[Ribosomal protein S19]], [[Ribosomal protein S2]], [[Ribosomal protein S20]], [[Ribosomal protein S3]], [[Ribosomal protein S4]], [[Ribosomal protein S5]], [[Ribosomal protein S6]], [[Ribosomal protein S7]], [[Ribosomal protein S8]], [[Ribosomal protein S9]], [[Ribosomal protein THX]] and [[Ribosome]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli], [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus] and [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. The January 2010 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''70S Ribosomes'' by David Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2010_1 10.2210/rcsb_pdb/mom_2010_1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HUW OCA].

	==See Also==		==See Also==
-	*[[Ribosomal protein S10]]	+	*[[Ribosomal protein S10\|Ribosomal protein S10]]
-	*[[Ribosomal protein S11]]	+	*[[Ribosomal protein S11\|Ribosomal protein S11]]
-	*[[Ribosomal protein S12]]	+	*[[Ribosomal protein S12\|Ribosomal protein S12]]
-	*[[Ribosomal protein S13]]	+	*[[Ribosomal protein S13\|Ribosomal protein S13]]
-	*[[Ribosomal protein S15]]	+	*[[Ribosomal protein S14\|Ribosomal protein S14]]
-	*[[Ribosomal protein S17]]	+	*[[Ribosomal protein S15\|Ribosomal protein S15]]
-	*[[Ribosomal protein S2]]	+	*[[Ribosomal protein S16\|Ribosomal protein S16]]
-	*[[Ribosomal protein S20]]	+	*[[Ribosomal protein S17\|Ribosomal protein S17]]
-	*[[Ribosomal protein S3]]	+	*[[Ribosomal protein S18\|Ribosomal protein S18]]
-	*[[Ribosomal protein S4]]	+	*[[Ribosomal protein S19\|Ribosomal protein S19]]
-	*[[Ribosomal protein THX]]	+	*[[Ribosomal protein S2\|Ribosomal protein S2]]
-	*[[Ribosome]]	+	*[[Ribosomal protein S20\|Ribosomal protein S20]]
		+	*[[Ribosomal protein S3\|Ribosomal protein S3]]
		+	*[[Ribosomal protein S4\|Ribosomal protein S4]]
		+	*[[Ribosomal protein S5\|Ribosomal protein S5]]
		+	*[[Ribosomal protein S6\|Ribosomal protein S6]]
		+	*[[Ribosomal protein S7\|Ribosomal protein S7]]
		+	*[[Ribosomal protein S8\|Ribosomal protein S8]]
		+	*[[Ribosomal protein S9\|Ribosomal protein S9]]
		+	*[[Ribosomal protein THX\|Ribosomal protein THX]]
		+	*[[Ribosome\|Ribosome]]

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~19696344~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:019696344</ref><references group="xtra"/>
	[[Category: 70S Ribosomes]]		[[Category: 70S Ribosomes]]
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: RCSB PDB Molecule of the Month]]		[[Category: RCSB PDB Molecule of the Month]]
		+	[[Category: Thermus thermophilus]]
	[[Category: Thermus thermophilus hb8]]		[[Category: Thermus thermophilus hb8]]
	[[Category: Blaha, G.]]		[[Category: Blaha, G.]]

OCA: Protected "3huw" [edit=sysop:move=sysop]

OCA — Mon, 27 Dec 2010 00:43:55 GMT

Protected "3huw" [edit=sysop:move=sysop]

←Older revision

Revision as of 00:43, 27 December 2010

OCA at 00:43, 27 December 2010

OCA — Mon, 27 Dec 2010 00:43:54 GMT

←Older revision		Revision as of 00:43, 27 December 2010
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-	{{Seed}}
	[[Image:3huw.png\|left\|200px]]		[[Image:3huw.png\|left\|200px]]

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	==About this Structure==		==About this Structure==
-	~~3HUW~~ is a 24 ~~chains~~ structure with ~~sequences~~ from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. The January 2010 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''70S Ribosomes'' by David Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2010_1 10.2210/rcsb_pdb/mom_2010_1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HUW OCA].	+	[[3huw]] is a 24 chain structure of [[Ribosomal protein S10]], [[Ribosomal protein S11]], [[Ribosomal protein S12]], [[Ribosomal protein S13]], [[Ribosomal protein S15]], [[Ribosomal protein S17]], [[Ribosomal protein S2]], [[Ribosomal protein S20]], [[Ribosomal protein S3]], [[Ribosomal protein S4]], [[Ribosomal protein THX]] and [[Ribosome]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. The January 2010 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''70S Ribosomes'' by David Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2010_1 10.2210/rcsb_pdb/mom_2010_1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HUW OCA].
		+
		+	==See Also==
		+	*[[Ribosomal protein S10]]
		+	*[[Ribosomal protein S11]]
		+	*[[Ribosomal protein S12]]
		+	*[[Ribosomal protein S13]]
		+	*[[Ribosomal protein S15]]
		+	*[[Ribosomal protein S17]]
		+	*[[Ribosomal protein S2]]
		+	*[[Ribosomal protein S20]]
		+	*[[Ribosomal protein S3]]
		+	*[[Ribosomal protein S4]]
		+	*[[Ribosomal protein THX]]
		+	*[[Ribosome]]

	==Reference==		==Reference==
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	[[Category: Ribosome]]		[[Category: Ribosome]]
	[[Category: Translation]]		[[Category: Translation]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jan 21 10:12:27 2010''

OCA at 08:12, 21 January 2010

OCA — Thu, 21 Jan 2010 08:12:29 GMT

←Older revision		Revision as of 08:12, 21 January 2010
Line 1:		Line 1:
	{{Seed}}		{{Seed}}
-	[[Image:3huw.~~jpg~~\|left\|200px]]	+	[[Image:3huw.png\|left\|200px]]

	<!--		<!--
Line 20:		Line 20:

	==About this Structure==		==About this Structure==
-	3HUW is a 24 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HUW OCA].	+	3HUW is a 24 chains structure with sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. The January 2010 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''70S Ribosomes'' by David Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2010_1 10.2210/rcsb_pdb/mom_2010_1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HUW OCA].

	==Reference==		==Reference==
	<ref group="xtra">PMID:19696344</ref><references group="xtra"/>		<ref group="xtra">PMID:19696344</ref><references group="xtra"/>
		+	[[Category: 70S Ribosomes]]
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
		+	[[Category: RCSB PDB Molecule of the Month]]
	[[Category: Thermus thermophilus hb8]]		[[Category: Thermus thermophilus hb8]]
	[[Category: Blaha, G.]]		[[Category: Blaha, G.]]
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	[[Category: Translation]]		[[Category: Translation]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Sep 30 09~~:19:~~07 2009~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jan 21 10:12:27 2010''

OCA at 07:19, 30 September 2009

OCA — Wed, 30 Sep 2009 07:19:09 GMT

←Older revision		Revision as of 07:19, 30 September 2009
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-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3huw.jpg\|left\|200px]]

-	The ~~entry 3huw~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3huw", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3huw\| PDB=3huw \| SCENE= }}

-	~~Authors: Stanley~~, ~~R.E., Blaha~~, G.	+	===Structure of EF-P bound to the 70S ribosome; THIS FILE CONTAINS THE 30S SUBUNIT, MRNA, P-SITE TRNA AND EF-P FOR MOLECULE I.===

-	Description: Structure of EF-P bound to the 70S ribosome; THIS FILE CONTAINS THE 30S SUBUNIT, MRNA, P-SITE TRNA AND EF-P FOR MOLECULE I.

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Aug 12 12~~:23:58 2009''	+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_19696344}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 19696344 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_19696344}}
		+
		+	==About this Structure==
		+	3HUW is a 24 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HUW OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:19696344</ref><references group="xtra"/>
		+	[[Category: Escherichia coli]]
		+	[[Category: Thermus thermophilus hb8]]
		+	[[Category: Blaha, G.]]
		+	[[Category: Stanley, R E.]]
		+	[[Category: Elongation factor]]
		+	[[Category: Initiation]]
		+	[[Category: L1-stalk]]
		+	[[Category: Ribosome]]
		+	[[Category: Translation]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 30 09:19:07 2009''

OCA at 09:23, 12 August 2009

OCA — Wed, 12 Aug 2009 09:23:58 GMT

←Older revision		Revision as of 09:23, 12 August 2009
Line 5:		Line 5:
	Authors: Stanley, R.E., Blaha, G.		Authors: Stanley, R.E., Blaha, G.

-	Description: Structure of EF-P bound to the 70S ribosome	+	Description: Structure of EF-P bound to the 70S ribosome; THIS FILE CONTAINS THE 30S SUBUNIT, MRNA, P-SITE TRNA AND EF-P FOR MOLECULE I.

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Thu Jun 25 08:~~12:27 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 12 12:23:58 2009''

OCA: New page: '''Unreleased structure''' The entry 3huw is ON HOLD Authors: Stanley, R.E., Blaha, G. Description: Structure of EF-P bound to the 70S ribosome ''Page seeded by [http://oca.weizmann.a...

OCA — Thu, 25 Jun 2009 05:12:27 GMT

New page: '''Unreleased structure''' The entry 3huw is ON HOLD Authors: Stanley, R.E., Blaha, G. Description: Structure of EF-P bound to the 70S ribosome ''Page seeded by [http://oca.weizmann.a...

New page

'''Unreleased structure'''

The entry 3huw is ON HOLD

Authors: Stanley, R.E., Blaha, G.

Description: Structure of EF-P bound to the 70S ribosome

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jun 25 08:12:27 2009''