3i0u - Revision history

OCA at 10:02, 21 February 2024

OCA — Wed, 21 Feb 2024 10:02:43 GMT

←Older revision		Revision as of 10:02, 21 February 2024
Line 3:		Line 3:
	<StructureSection load='3i0u' size='340' side='right'caption='[[3i0u]], [[Resolution\|resolution]] 2.70Å' scene=''>		<StructureSection load='3i0u' size='340' side='right'caption='[[3i0u]], [[Resolution\|resolution]] 2.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3i0u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"shigella_paradysenteriae"_weldin_1927 "shigella paradysenteriae" weldin 1927~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I0U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I0U FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3i0u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I0U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I0U FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=MPD:(4S)~~-2~~-METHYL-2,4-PENTANEDIOL'>MPD</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.7Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max~~-~~height: 3em;'>[[3bo6\|3bo6]]~~, ~~[[2p1w\|2p1w]], [[2z8n\|2z8n]]</div></td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
-	~~<tr id='gene~~'>~~<td class="sblockLbl"><b>[[Gene\|Gene:]]~~</b>~~</td><td class="sblockDat">CP0010, mkaD, ospF, pWR501_0013, SFLP011 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=623 "Shigella paradysenteriae" Weldin 1927])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i0u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i0u OCA], [https://pdbe.org/3i0u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i0u RCSB], [https://www.ebi.ac.uk/pdbsum/3i0u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i0u ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i0u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i0u OCA], [https://pdbe.org/3i0u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i0u RCSB], [https://www.ebi.ac.uk/pdbsum/3i0u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i0u ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/OSPF_SHIFL OSPF_SHIFL]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Shigella paradysenteriae weldin 1927]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Anderson, W F]]
-	[[Category: Structural genomic]]
-	[[Category: Chirgadze, N Y]]
-	[[Category: Edwards, A M]]
-	[[Category: Gordon, R]]
-	[[Category: Joachimiak, A]]
-	[[Category: Kagan, O]]
-	[[Category: Lam, R]]
-	[[Category: Nocek, B]]
-	[[Category: Savchenko, A]]
-	[[Category: Singer, A U]]
-	[[Category: Skarina, T]]
-	[[Category: Apo-structure]]
-	[[Category: Csgid]]
-	[[Category: Lyase]]
-	[[Category: Phosphothreonine lyase]]
-	[[Category: Secreted]]
	[[Category: Shigella flexneri]]		[[Category: Shigella flexneri]]
-	[[Category: ~~Type iii effector~~]]	+	[[Category: Anderson WF]]
-	[[Category: ~~Virulence~~]]	+	[[Category: Chirgadze NY]]
		+	[[Category: Edwards AM]]
		+	[[Category: Gordon R]]
		+	[[Category: Joachimiak A]]
		+	[[Category: Kagan O]]
		+	[[Category: Lam R]]
		+	[[Category: Nocek B]]
		+	[[Category: Savchenko A]]
		+	[[Category: Singer AU]]
		+	[[Category: Skarina T]]

OCA at 11:19, 6 April 2022

OCA — Wed, 06 Apr 2022 11:19:45 GMT

←Older revision		Revision as of 11:19, 6 April 2022
Line 1:		Line 1:

	==Structure of the type III effector/phosphothreonine lyase OspF from Shigella flexneri==		==Structure of the type III effector/phosphothreonine lyase OspF from Shigella flexneri==
-	<StructureSection load='3i0u' size='340' side='right' caption='[[3i0u]], [[Resolution\|resolution]] 2.70Å' scene=''>	+	<StructureSection load='3i0u' size='340' side='right'caption='[[3i0u]], [[Resolution\|resolution]] 2.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3i0u]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"shigella_paradysenteriae"_weldin_1927 "shigella paradysenteriae" weldin 1927]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I0U OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3I0U FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3i0u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"shigella_paradysenteriae"_weldin_1927 "shigella paradysenteriae" weldin 1927]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I0U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I0U FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bo6\|3bo6]], [[2p1w\|2p1w]], [[2z8n\|2z8n]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3bo6\|3bo6]], [[2p1w\|2p1w]], [[2z8n\|2z8n]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CP0010, mkaD, ospF, pWR501_0013, SFLP011 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=623 "Shigella paradysenteriae" Weldin 1927])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CP0010, mkaD, ospF, pWR501_0013, SFLP011 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=623 "Shigella paradysenteriae" Weldin 1927])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3i0u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i0u OCA], [~~http~~://pdbe.org/3i0u PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3i0u RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3i0u PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3i0u ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i0u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i0u OCA], [https://pdbe.org/3i0u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i0u RCSB], [https://www.ebi.ac.uk/pdbsum/3i0u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i0u ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 22:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Shigella paradysenteriae weldin 1927]]		[[Category: Shigella paradysenteriae weldin 1927]]
		+	[[Category: Large Structures]]
	[[Category: Anderson, W F]]		[[Category: Anderson, W F]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]

OCA at 10:08, 19 December 2018

OCA — Wed, 19 Dec 2018 10:08:56 GMT

←Older revision		Revision as of 10:08, 19 December 2018
Line 1:		Line 1:
		+
	==Structure of the type III effector/phosphothreonine lyase OspF from Shigella flexneri==		==Structure of the type III effector/phosphothreonine lyase OspF from Shigella flexneri==
	<StructureSection load='3i0u' size='340' side='right' caption='[[3i0u]], [[Resolution\|resolution]] 2.70Å' scene=''>		<StructureSection load='3i0u' size='340' side='right' caption='[[3i0u]], [[Resolution\|resolution]] 2.70Å' scene=''>
Line 6:		Line 7:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bo6\|3bo6]], [[2p1w\|2p1w]], [[2z8n\|2z8n]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bo6\|3bo6]], [[2p1w\|2p1w]], [[2z8n\|2z8n]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CP0010, mkaD, ospF, pWR501_0013, SFLP011 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=623 "Shigella paradysenteriae" Weldin 1927])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CP0010, mkaD, ospF, pWR501_0013, SFLP011 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=623 "Shigella paradysenteriae" Weldin 1927])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3i0u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i0u OCA], [http://pdbe.org/3i0u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3i0u RCSB], [http://www.ebi.ac.uk/pdbsum/3i0u PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3i0u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i0u OCA], [http://pdbe.org/3i0u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3i0u RCSB], [http://www.ebi.ac.uk/pdbsum/3i0u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3i0u ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i0/3i0u_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i0/3i0u_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 22:		Line 23:
	[[Category: Shigella paradysenteriae weldin 1927]]		[[Category: Shigella paradysenteriae weldin 1927]]
	[[Category: Anderson, W F]]		[[Category: Anderson, W F]]
		+	[[Category: Structural genomic]]
	[[Category: Chirgadze, N Y]]		[[Category: Chirgadze, N Y]]
	[[Category: Edwards, A M]]		[[Category: Edwards, A M]]
Line 33:		Line 35:
	[[Category: Skarina, T]]		[[Category: Skarina, T]]
	[[Category: Apo-structure]]		[[Category: Apo-structure]]
-	[[Category: Structural genomic]]
	[[Category: Csgid]]		[[Category: Csgid]]
	[[Category: Lyase]]		[[Category: Lyase]]

OCA at 01:36, 8 February 2016

OCA — Mon, 08 Feb 2016 01:36:45 GMT

←Older revision		Revision as of 01:36, 8 February 2016
Line 2:		Line 2:
	<StructureSection load='3i0u' size='340' side='right' caption='[[3i0u]], [[Resolution\|resolution]] 2.70Å' scene=''>		<StructureSection load='3i0u' size='340' side='right' caption='[[3i0u]], [[Resolution\|resolution]] 2.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3i0u]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Shigella_flexneri Shigella flexneri~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I0U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3I0U FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3i0u]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"shigella_paradysenteriae"_weldin_1927 "shigella paradysenteriae" weldin 1927]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I0U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3I0U FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bo6\|3bo6]], [[2p1w\|2p1w]], [[2z8n\|2z8n]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bo6\|3bo6]], [[2p1w\|2p1w]], [[2z8n\|2z8n]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CP0010, mkaD, ospF, pWR501_0013, SFLP011 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=623 Shigella ~~flexneri~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CP0010, mkaD, ospF, pWR501_0013, SFLP011 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=623 "Shigella paradysenteriae" Weldin 1927])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3i0u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i0u OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3i0u RCSB], [http://www.ebi.ac.uk/pdbsum/3i0u PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3i0u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i0u OCA], [http://pdbe.org/3i0u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3i0u RCSB], [http://www.ebi.ac.uk/pdbsum/3i0u PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3i0u ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Shigella ~~flexneri~~]]	+	[[Category: Shigella paradysenteriae weldin 1927]]
	[[Category: Anderson, W F]]		[[Category: Anderson, W F]]
	[[Category: Chirgadze, N Y]]		[[Category: Chirgadze, N Y]]
Line 38:		Line 38:
	[[Category: Phosphothreonine lyase]]		[[Category: Phosphothreonine lyase]]
	[[Category: Secreted]]		[[Category: Secreted]]
		+	[[Category: Shigella flexneri]]
	[[Category: Type iii effector]]		[[Category: Type iii effector]]
	[[Category: Virulence]]		[[Category: Virulence]]

OCA at 06:33, 18 December 2014

OCA — Thu, 18 Dec 2014 06:33:30 GMT

←Older revision		Revision as of 06:33, 18 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3i0u\| PDB=3i0u \| SCENE= }}~~	+	==Structure of the type III effector/phosphothreonine lyase OspF from Shigella flexneri==
-	===Structure of the type III effector/phosphothreonine lyase OspF from Shigella flexneri===	+	<StructureSection load='3i0u' size='340' side='right' caption='[[3i0u]], [[Resolution\|resolution]] 2.70Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[3i0u]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I0U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3I0U FirstGlance]. <br>
-	[[3i0u]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I0U OCA].	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bo6\|3bo6]], [[2p1w\|2p1w]], [[2z8n\|2z8n]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CP0010, mkaD, ospF, pWR501_0013, SFLP011 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=623 Shigella flexneri])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3i0u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i0u OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3i0u RCSB], [http://www.ebi.ac.uk/pdbsum/3i0u PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i0/3i0u_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Shigella flexneri]]		[[Category: Shigella flexneri]]
-	[[Category: Anderson, W F.]]	+	[[Category: Anderson, W F]]
-	[[Category: Chirgadze, N Y.]]	+	[[Category: Chirgadze, N Y]]
-	[[Category: Edwards, A M.]]	+	[[Category: Edwards, A M]]
-	[[Category: Gordon, R.]]	+	[[Category: Gordon, R]]
-	[[Category: Joachimiak, A.]]	+	[[Category: Joachimiak, A]]
-	[[Category: Kagan, O.]]	+	[[Category: Kagan, O]]
-	[[Category: Lam, R.]]	+	[[Category: Lam, R]]
-	[[Category: Nocek, B.]]	+	[[Category: Nocek, B]]
-	[[Category: Savchenko, A.]]	+	[[Category: Savchenko, A]]
-	[[Category: Singer, A U.]]	+	[[Category: Singer, A U]]
-	[[Category: Skarina, T.]]	+	[[Category: Skarina, T]]
	[[Category: Apo-structure]]		[[Category: Apo-structure]]
-	[[Category: ~~Center for structural genomics of infectious disease~~]]	+	[[Category: Structural genomic]]
	[[Category: Csgid]]		[[Category: Csgid]]
	[[Category: Lyase]]		[[Category: Lyase]]
	[[Category: Phosphothreonine lyase]]		[[Category: Phosphothreonine lyase]]
	[[Category: Secreted]]		[[Category: Secreted]]
-	[[Category: Shigella flexneri]]
-	[[Category: Structural genomic]]
	[[Category: Type iii effector]]		[[Category: Type iii effector]]
	[[Category: Virulence]]		[[Category: Virulence]]

OCA: Protected "3i0u" [edit=sysop:move=sysop]

OCA — Wed, 13 Mar 2013 11:05:26 GMT

Protected "3i0u" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:05, 13 March 2013

OCA at 11:05, 13 March 2013

OCA — Wed, 13 Mar 2013 11:05:23 GMT

←Older revision		Revision as of 11:05, 13 March 2013
Line 1:		Line 1:
-	{{Seed}}
-	[[Image:3i0u.jpg\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3i0u", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3i0u\| PDB=3i0u \| SCENE= }}		{{STRUCTURE_3i0u\| PDB=3i0u \| SCENE= }}
-
	===Structure of the type III effector/phosphothreonine lyase OspF from Shigella flexneri===		===Structure of the type III effector/phosphothreonine lyase OspF from Shigella flexneri===
-

	==About this Structure==		==About this Structure==
-	~~3I0U~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I0U OCA].	+	[[3i0u]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I0U OCA].
	[[Category: Shigella flexneri]]		[[Category: Shigella flexneri]]
	[[Category: Anderson, W F.]]		[[Category: Anderson, W F.]]
Line 32:		Line 21:
	[[Category: Lyase]]		[[Category: Lyase]]
	[[Category: Phosphothreonine lyase]]		[[Category: Phosphothreonine lyase]]
-	[[Category: Plasmid]]
	[[Category: Secreted]]		[[Category: Secreted]]
	[[Category: Shigella flexneri]]		[[Category: Shigella flexneri]]
Line 38:		Line 26:
	[[Category: Type iii effector]]		[[Category: Type iii effector]]
	[[Category: Virulence]]		[[Category: Virulence]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Sep 3 16:13:11 2009''

OCA at 13:13, 3 September 2009

OCA — Thu, 03 Sep 2009 13:13:12 GMT

←Older revision		Revision as of 13:13, 3 September 2009
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3i0u.jpg\|left\|200px]]

-	The ~~entry 3i0u~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3i0u", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3i0u\| PDB=3i0u \| SCENE= }}

-	~~Authors: Singer, A.U., Skarina, T., Nocek, B., Gordon, R., Lam, R., Kagan, O., Edwards, A.M., Joachimiak, A., Chirgadze, N.Y., Anderson, W.F., Savchenko, A.~~	+	===Structure of the type III effector/phosphothreonine lyase OspF from Shigella flexneri===

-	Description: Structure of the type III effector/phosphothreonine lyase OspF from Shigella flexneri

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Jul~~ ~~8 09~~:15:50 2009''	+	==About this Structure==
		+	3I0U is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I0U OCA].
		+	[[Category: Shigella flexneri]]
		+	[[Category: Anderson, W F.]]
		+	[[Category: Chirgadze, N Y.]]
		+	[[Category: Edwards, A M.]]
		+	[[Category: Gordon, R.]]
		+	[[Category: Joachimiak, A.]]
		+	[[Category: Kagan, O.]]
		+	[[Category: Lam, R.]]
		+	[[Category: Nocek, B.]]
		+	[[Category: Savchenko, A.]]
		+	[[Category: Singer, A U.]]
		+	[[Category: Skarina, T.]]
		+	[[Category: Apo-structure]]
		+	[[Category: Center for structural genomics of infectious disease]]
		+	[[Category: Csgid]]
		+	[[Category: Lyase]]
		+	[[Category: Phosphothreonine lyase]]
		+	[[Category: Plasmid]]
		+	[[Category: Secreted]]
		+	[[Category: Shigella flexneri]]
		+	[[Category: Structural genomic]]
		+	[[Category: Type iii effector]]
		+	[[Category: Virulence]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Sep 3 16:13:11 2009''

OCA at 06:15, 8 July 2009

OCA — Wed, 08 Jul 2009 06:15:51 GMT

←Older revision		Revision as of 06:15, 8 July 2009
Line 3:		Line 3:
	The entry 3i0u is ON HOLD		The entry 3i0u is ON HOLD

-	Authors: Singer, A.U., Skarina, T., ~~Lam~~, R., Gordon, R., ~~Nocek~~, B., Kagan, O., Edwards, A.M., Chirgadze, N.Y., ~~Parsot~~, C.~~, Arbibe, L~~., Savchenko, A.	+	Authors: Singer, A.U., Skarina, T., Nocek, B., Gordon, R., Lam, R., Kagan, O., Edwards, A.M., Joachimiak, A., Chirgadze, N.Y., Anderson, W.F., Savchenko, A.

	Description: Structure of the type III effector/phosphothreonine lyase OspF from Shigella flexneri		Description: Structure of the type III effector/phosphothreonine lyase OspF from Shigella flexneri

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul ~~1 08~~:58:18 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 8 09:15:50 2009''

OCA: New page: '''Unreleased structure''' The entry 3i0u is ON HOLD Authors: Singer, A.U., Skarina, T., Lam, R., Gordon, R., Nocek, B., Kagan, O., Edwards, A.M., Chirgadze, N.Y., Parsot, C., Arbibe, L...

OCA — Wed, 01 Jul 2009 05:58:18 GMT

New page: '''Unreleased structure''' The entry 3i0u is ON HOLD Authors: Singer, A.U., Skarina, T., Lam, R., Gordon, R., Nocek, B., Kagan, O., Edwards, A.M., Chirgadze, N.Y., Parsot, C., Arbibe, L...

New page

'''Unreleased structure'''

The entry 3i0u is ON HOLD

Authors: Singer, A.U., Skarina, T., Lam, R., Gordon, R., Nocek, B., Kagan, O., Edwards, A.M., Chirgadze, N.Y., Parsot, C., Arbibe, L., Savchenko, A.

Description: Structure of the type III effector/phosphothreonine lyase OspF from Shigella flexneri

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 1 08:58:18 2009''