3ih3 - Revision history

OCA at 07:47, 6 September 2023

OCA — Wed, 06 Sep 2023 07:47:43 GMT

←Older revision		Revision as of 07:47, 6 September 2023
Line 3:		Line 3:
	<StructureSection load='3ih3' size='340' side='right'caption='[[3ih3]], [[Resolution\|resolution]] 2.35Å' scene=''>		<StructureSection load='3ih3' size='340' side='right'caption='[[3ih3]], [[Resolution\|resolution]] 2.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ih3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Atcc_43589 Atcc 43589~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IH3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IH3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ih3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IH3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IH3 FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"~~><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.35Å</td></tr>
-	~~<tr~~ id~~='related'><td class~~="~~sblockLbl~~">~~<b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max~~-~~height: 3em;'>[[3ih2\|3ih2]]~~, [[~~3ih4~~\|~~3ih4~~]]~~</div>~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~TM1030, TM_1030 ([https~~:/~~/www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ih3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ih3 OCA], [https://pdbe.org/3ih3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ih3 RCSB], [https://www.ebi.ac.uk/pdbsum/3ih3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ih3 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ih3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ih3 OCA], [https://pdbe.org/3ih3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ih3 RCSB], [https://www.ebi.ac.uk/pdbsum/3ih3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ih3 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q9X0C0_THEMA Q9X0C0_THEMA]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 36:		Line 37:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Atcc 43589]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Bujacz, G]]	+	[[Category: Thermotoga maritima]]
-	[[Category: Chruszcz, M]]	+	[[Category: Bujacz G]]
-	[[Category: Joachimiak, A]]	+	[[Category: Chruszcz M]]
-	[[Category: Koclega~~, K D]]~~	+	[[Category: Joachimiak A]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Koclega KD]]
-	[[Category: Minor, W]]	+	[[Category: Minor W]]
-	~~[[Category: Dna-binding]]~~	+
-	~~[[Category: Mcsg]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Temperature]]~~	+
-	~~[[Category: Tm1030]]~~	+
-	~~[[Category: Transcription]]~~	+
-	~~[[Category: Transcription regulation]]~~	+
-	~~[[Category: Transcription regulator]]~~	+
-	~~[[Category: Transcriptional regulator~~]]	+

OCA at 09:55, 13 April 2022

OCA — Wed, 13 Apr 2022 09:55:34 GMT

←Older revision		Revision as of 09:55, 13 April 2022
Line 1:		Line 1:

	==TM1030 crystallized at 310K==		==TM1030 crystallized at 310K==
-	<StructureSection load='3ih3' size='340' side='right' caption='[[3ih3]], [[Resolution\|resolution]] 2.35Å' scene=''>	+	<StructureSection load='3ih3' size='340' side='right'caption='[[3ih3]], [[Resolution\|resolution]] 2.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ih3]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IH3 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3IH3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ih3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IH3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IH3 FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ih2\|3ih2]], [[3ih4\|3ih4]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3ih2\|3ih2]], [[3ih4\|3ih4]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TM1030, TM_1030 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TM1030, TM_1030 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3ih3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ih3 OCA], [~~http~~://pdbe.org/3ih3 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3ih3 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3ih3 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3ih3 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ih3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ih3 OCA], [https://pdbe.org/3ih3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ih3 RCSB], [https://www.ebi.ac.uk/pdbsum/3ih3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ih3 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 28:		Line 28:
	</div>		</div>
	<div class="pdbe-citations 3ih3" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 3ih3" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Tetracycline repressor protein 3D structures\|Tetracycline repressor protein 3D structures]]
		+	*[[Transcriptional activator 3D structures\|Transcriptional activator 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 33:		Line 37:
	</StructureSection>		</StructureSection>
	[[Category: Atcc 43589]]		[[Category: Atcc 43589]]
		+	[[Category: Large Structures]]
	[[Category: Bujacz, G]]		[[Category: Bujacz, G]]
	[[Category: Chruszcz, M]]		[[Category: Chruszcz, M]]

OCA at 09:44, 19 December 2018

OCA — Wed, 19 Dec 2018 09:44:57 GMT

←Older revision		Revision as of 09:44, 19 December 2018
Line 1:		Line 1:
		+
	==TM1030 crystallized at 310K==		==TM1030 crystallized at 310K==
	<StructureSection load='3ih3' size='340' side='right' caption='[[3ih3]], [[Resolution\|resolution]] 2.35Å' scene=''>		<StructureSection load='3ih3' size='340' side='right' caption='[[3ih3]], [[Resolution\|resolution]] 2.35Å' scene=''>
Line 6:		Line 7:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ih2\|3ih2]], [[3ih4\|3ih4]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ih2\|3ih2]], [[3ih4\|3ih4]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TM1030, TM_1030 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TM1030, TM_1030 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ih3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ih3 OCA], [http://pdbe.org/3ih3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ih3 RCSB], [http://www.ebi.ac.uk/pdbsum/3ih3 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ih3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ih3 OCA], [http://pdbe.org/3ih3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ih3 RCSB], [http://www.ebi.ac.uk/pdbsum/3ih3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ih3 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ih/3ih3_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ih/3ih3_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 23:51, 9 February 2016

OCA — Tue, 09 Feb 2016 23:51:15 GMT

←Older revision		Revision as of 23:51, 9 February 2016
Line 2:		Line 2:
	<StructureSection load='3ih3' size='340' side='right' caption='[[3ih3]], [[Resolution\|resolution]] 2.35Å' scene=''>		<StructureSection load='3ih3' size='340' side='right' caption='[[3ih3]], [[Resolution\|resolution]] 2.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ih3]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Thermotoga_maritima Thermotoga maritima~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IH3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IH3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ih3]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IH3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IH3 FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ih2\|3ih2]], [[3ih4\|3ih4]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ih2\|3ih2]], [[3ih4\|3ih4]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TM1030, TM_1030 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ~~Thermotoga maritima~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TM1030, TM_1030 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ih3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ih3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ih3 RCSB], [http://www.ebi.ac.uk/pdbsum/3ih3 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ih3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ih3 OCA], [http://pdbe.org/3ih3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ih3 RCSB], [http://www.ebi.ac.uk/pdbsum/3ih3 PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ih3 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 26:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3ih3" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Thermotoga maritima~~]]	+	[[Category: Atcc 43589]]
	[[Category: Bujacz, G]]		[[Category: Bujacz, G]]
	[[Category: Chruszcz, M]]		[[Category: Chruszcz, M]]

OCA at 06:03, 18 December 2014

OCA — Thu, 18 Dec 2014 06:03:10 GMT

←Older revision		Revision as of 06:03, 18 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3ih3~~\| ~~PDB~~=3ih3 \| ~~SCENE~~= }}	+	==TM1030 crystallized at 310K==
-	===TM1030 ~~crystallized at 310K~~===	+	<StructureSection load='3ih3' size='340' side='right' caption='[[3ih3]], [[Resolution\|resolution]] 2.35Å' scene=''>
-	~~{{ABSTRACT_PUBMED_20161694}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3ih3]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IH3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IH3 FirstGlance]. <br>
		+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ih2\|3ih2]], [[3ih4\|3ih4]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TM1030, TM_1030 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 Thermotoga maritima])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ih3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ih3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ih3 RCSB], [http://www.ebi.ac.uk/pdbsum/3ih3 PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ih/3ih3_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Transcriptional regulator protein TM1030 from the hyperthermophile Thermotoga maritima, as well as its complex with DNA, was crystallized at a wide range of temperatures. Crystallization plates were incubated at 4, 20, 37 and 50 degrees C over 3 weeks. The best crystals of TM1030 in complex with DNA were obtained at 4, 20 and 37 degrees C, while TM1030 alone crystallized almost equally well in all temperatures. The crystals grown at different temperatures were used for X-ray diffraction experiments and their structures were compared. Surprisingly, the models of TM1030 obtained from crystals grown at different temperatures are similar in quality. While there are some examples of structures of proteins grown at elevated temperatures in the PDB, these temperatures appear to be underrepresented. Our studies show that crystals of some proteins may be grown and are stable at broad range of temperatures. We suggest that crystallization experiments at elevated temperatures could be used as a standard part of the crystallization protocol.

-	~~==About this Structure==~~	+	'Hot' macromolecular crystals.,Koclega KD, Chruszcz M, Zimmerman MD, Bujacz G, Minor W Cryst Growth Des. 2009 Dec 18;10(2):580. PMID:20161694<ref>PMID:20161694</ref>
-	~~[[3ih3]] is a 1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Thermotoga_maritima Thermotoga maritima]~~. ~~Full crystallographic information is available from [http~~:/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3IH3 OCA].~~	+

-	==~~Reference~~==	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	<~~ref group="xtra">PMID:020161694<~~/~~ref~~><~~references group="xtra"~~/>	+	</div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Thermotoga maritima]]		[[Category: Thermotoga maritima]]
-	[[Category: Bujacz, G.]]	+	[[Category: Bujacz, G]]
-	[[Category: Chruszcz, M.]]	+	[[Category: Chruszcz, M]]
-	[[Category: Joachimiak, A.]]	+	[[Category: Joachimiak, A]]
-	[[Category: Koclega, K D.]]	+	[[Category: Koclega, K D]]
-	[[Category: ~~MCSG, Midwest Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Minor, W.]]	+	[[Category: Minor, W]]
	[[Category: Dna-binding]]		[[Category: Dna-binding]]
	[[Category: Mcsg]]		[[Category: Mcsg]]
-	[[Category: ~~Midwest center for structural genomic]]~~	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category:~~ Protein structure initiative]]	+
-	~~[[Category: Psi-2]]~~	+
-	~~[[Category: Structural genomic~~]]	+
	[[Category: Temperature]]		[[Category: Temperature]]
	[[Category: Tm1030]]		[[Category: Tm1030]]

OCA: Protected "3ih3" [edit=sysop:move=sysop]

OCA — Wed, 13 Mar 2013 11:13:13 GMT

Protected "3ih3" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:13, 13 March 2013

OCA at 11:13, 13 March 2013

OCA — Wed, 13 Mar 2013 11:13:09 GMT

←Older revision		Revision as of 11:13, 13 March 2013
Line 1:		Line 1:
-	{{Seed}}
-	[[Image:3ih3.png\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3ih3", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3ih3\| PDB=3ih3 \| SCENE= }}		{{STRUCTURE_3ih3\| PDB=3ih3 \| SCENE= }}
-
	===TM1030 crystallized at 310K===		===TM1030 crystallized at 310K===
-
-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_20161694}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 20161694 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_20161694}}		{{ABSTRACT_PUBMED_20161694}}

	==About this Structure==		==About this Structure==
-	~~3IH3~~ is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IH3 OCA].	+	[[3ih3]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IH3 OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~20161694~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:020161694</ref><references group="xtra"/>
	[[Category: Thermotoga maritima]]		[[Category: Thermotoga maritima]]
	[[Category: Bujacz, G.]]		[[Category: Bujacz, G.]]
Line 43:		Line 27:
	[[Category: Transcription regulator]]		[[Category: Transcription regulator]]
	[[Category: Transcriptional regulator]]		[[Category: Transcriptional regulator]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 21 09:17:29 2010''

OCA at 06:17, 21 April 2010

OCA — Wed, 21 Apr 2010 06:17:30 GMT

←Older revision		Revision as of 06:17, 21 April 2010
Line 1:		Line 1:
	{{Seed}}		{{Seed}}
-	[[Image:3ih3.~~jpg~~\|left\|200px]]	+	[[Image:3ih3.png\|left\|200px]]

	<!--		<!--
Line 12:		Line 12:
	===TM1030 crystallized at 310K===		===TM1030 crystallized at 310K===

		+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_20161694}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 20161694 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_20161694}}

	==About this Structure==		==About this Structure==
-	3IH3 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IH3 OCA].	+	3IH3 is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IH3 OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:20161694</ref><references group="xtra"/>
	[[Category: Thermotoga maritima]]		[[Category: Thermotoga maritima]]
	[[Category: Bujacz, G.]]		[[Category: Bujacz, G.]]
Line 35:		Line 44:
	[[Category: Transcriptional regulator]]		[[Category: Transcriptional regulator]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Aug 12 13~~:48:~~25 2009~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 21 09:17:29 2010''

OCA at 10:48, 12 August 2009

OCA — Wed, 12 Aug 2009 10:48:27 GMT

←Older revision		Revision as of 10:48, 12 August 2009
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3ih3.jpg\|left\|200px]]

-	The ~~entry 3ih3~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3ih3", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3ih3\| PDB=3ih3 \| SCENE= }}

-	~~Authors: Koclega, K., Chruszcz, M., Bujacz, G., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)~~	+	===TM1030 crystallized at 310K===

-	Description: TM1030 crystallized at 310K

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug ~~5 09~~:52:49 2009''	+	==About this Structure==
		+	3IH3 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IH3 OCA].
		+	[[Category: Thermotoga maritima]]
		+	[[Category: Bujacz, G.]]
		+	[[Category: Chruszcz, M.]]
		+	[[Category: Joachimiak, A.]]
		+	[[Category: Koclega, K D.]]
		+	[[Category: MCSG, Midwest Center for Structural Genomics.]]
		+	[[Category: Minor, W.]]
		+	[[Category: Dna-binding]]
		+	[[Category: Mcsg]]
		+	[[Category: Midwest center for structural genomic]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-2]]
		+	[[Category: Structural genomic]]
		+	[[Category: Temperature]]
		+	[[Category: Tm1030]]
		+	[[Category: Transcription]]
		+	[[Category: Transcription regulation]]
		+	[[Category: Transcription regulator]]
		+	[[Category: Transcriptional regulator]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 12 13:48:25 2009''

OCA: New page: '''Unreleased structure''' The entry 3ih3 is ON HOLD Authors: Koclega, K., Chruszcz, M., Bujacz, G., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG) Descriptio...

OCA — Wed, 05 Aug 2009 06:52:49 GMT

New page: '''Unreleased structure''' The entry 3ih3 is ON HOLD Authors: Koclega, K., Chruszcz, M., Bujacz, G., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG) Descriptio...

New page

'''Unreleased structure'''

The entry 3ih3 is ON HOLD

Authors: Koclega, K., Chruszcz, M., Bujacz, G., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)

Description: TM1030 crystallized at 310K

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 5 09:52:49 2009''