3ix3 - Revision history

OCA at 07:59, 6 September 2023

OCA — Wed, 06 Sep 2023 07:59:45 GMT

←Older revision		Revision as of 07:59, 6 September 2023
Line 3:		Line 3:
	<StructureSection load='3ix3' size='340' side='right'caption='[[3ix3]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='3ix3' size='340' side='right'caption='[[3ix3]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ix3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IX3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IX3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ix3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IX3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IX3 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=OHN:N~~-~~3-OXO-DODECANOYL-L-HOMOSERINE+LACTONE'>OHN</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.4Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max~~-~~height: 3em;~~'>~~[[3ix4\|3ix4]], [[3ix8\|3ix8]]~~</~~div~~>~~</td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OHN:N-3-OXO-DODECANOYL-L-HOMOSERINE+LACTONE'>OHN</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lasR, PA1430 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885])</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ix3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ix3 OCA], [https://pdbe.org/3ix3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ix3 RCSB], [https://www.ebi.ac.uk/pdbsum/3ix3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ix3 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ix3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ix3 OCA], [https://pdbe.org/3ix3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ix3 RCSB], [https://www.ebi.ac.uk/pdbsum/3ix3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ix3 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/LASR_PSEAE LASR_PSEAE]] Transcriptional activator of elastase structural gene (LasB). Binds to the PAI autoinducer.	+	[https://www.uniprot.org/uniprot/LASR_PSEAE LASR_PSEAE] Transcriptional activator of elastase structural gene (LasB). Binds to the PAI autoinducer.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 27:		Line 26:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Nair, S K~~]]	+	[[Category: Pseudomonas aeruginosa]]
-	[[Category: ~~Zou, Y~~]]	+	[[Category: Nair SK]]
-	[[Category: ~~Activator]]~~	+	[[Category: Zou Y]]
-	~~[[Category: Dna-binding]]~~	+
-	~~[[Category: Quorum sensing]]~~	+
-	~~[[Category: Quorum sensing receptor]]~~	+
-	~~[[Category: Transcription]]~~	+
-	~~[[Category: Transcription regulation]]~~	+
-	~~[[Category: Triphenyl mimic~~]]	+

OCA at 03:44, 21 April 2022

OCA — Thu, 21 Apr 2022 03:44:13 GMT

←Older revision		Revision as of 03:44, 21 April 2022
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	==LasR-OC12 HSL complex==		==LasR-OC12 HSL complex==
-	<StructureSection load='3ix3' size='340' side='right' caption='[[3ix3]], [[Resolution\|resolution]] 1.40Å' scene=''>	+	<StructureSection load='3ix3' size='340' side='right'caption='[[3ix3]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ix3]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IX3 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3IX3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ix3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IX3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IX3 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=OHN:N-3-OXO-DODECANOYL-L-HOMOSERINE+LACTONE'>OHN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OHN:N-3-OXO-DODECANOYL-L-HOMOSERINE+LACTONE'>OHN</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ix4\|3ix4]], [[3ix8\|3ix8]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3ix4\|3ix4]], [[3ix8\|3ix8]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lasR, PA1430 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lasR, PA1430 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3ix3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ix3 OCA], [~~http~~://pdbe.org/3ix3 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3ix3 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3ix3 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3ix3 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ix3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ix3 OCA], [https://pdbe.org/3ix3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ix3 RCSB], [https://www.ebi.ac.uk/pdbsum/3ix3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ix3 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/LASR_PSEAE LASR_PSEAE]] Transcriptional activator of elastase structural gene (LasB). Binds to the PAI autoinducer.	+	[[https://www.uniprot.org/uniprot/LASR_PSEAE LASR_PSEAE]] Transcriptional activator of elastase structural gene (LasB). Binds to the PAI autoinducer.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 23:		Line 23:

	==See Also==		==See Also==
-	*[[Transcriptional activator\|Transcriptional activator]]	+	*[[Transcriptional activator 3D structures\|Transcriptional activator 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Nair, S K]]		[[Category: Nair, S K]]
	[[Category: Zou, Y]]		[[Category: Zou, Y]]

OCA at 10:03, 19 December 2018

OCA — Wed, 19 Dec 2018 10:03:57 GMT

←Older revision		Revision as of 10:03, 19 December 2018
Line 1:		Line 1:
		+
	==LasR-OC12 HSL complex==		==LasR-OC12 HSL complex==
	<StructureSection load='3ix3' size='340' side='right' caption='[[3ix3]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='3ix3' size='340' side='right' caption='[[3ix3]], [[Resolution\|resolution]] 1.40Å' scene=''>
Line 6:		Line 7:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ix4\|3ix4]], [[3ix8\|3ix8]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ix4\|3ix4]], [[3ix8\|3ix8]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lasR, PA1430 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lasR, PA1430 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ix3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ix3 OCA], [http://pdbe.org/3ix3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ix3 RCSB], [http://www.ebi.ac.uk/pdbsum/3ix3 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ix3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ix3 OCA], [http://pdbe.org/3ix3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ix3 RCSB], [http://www.ebi.ac.uk/pdbsum/3ix3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ix3 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 14:		Line 15:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ix/3ix3_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ix/3ix3_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 03:13, 8 February 2016

OCA — Mon, 08 Feb 2016 03:13:25 GMT

←Older revision		Revision as of 03:13, 8 February 2016
Line 2:		Line 2:
	<StructureSection load='3ix3' size='340' side='right' caption='[[3ix3]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='3ix3' size='340' side='right' caption='[[3ix3]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ix3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Pseudomonas_aeruginosa Pseudomonas aeruginosa~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IX3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IX3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ix3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IX3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IX3 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=OHN:N-3-OXO-DODECANOYL-L-HOMOSERINE+LACTONE'>OHN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=OHN:N-3-OXO-DODECANOYL-L-HOMOSERINE+LACTONE'>OHN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ix4\|3ix4]], [[3ix8\|3ix8]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ix4\|3ix4]], [[3ix8\|3ix8]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lasR, PA1430 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 ~~Pseudomonas aeruginosa~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lasR, PA1430 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ix3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ix3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ix3 RCSB], [http://www.ebi.ac.uk/pdbsum/3ix3 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ix3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ix3 OCA], [http://pdbe.org/3ix3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ix3 RCSB], [http://www.ebi.ac.uk/pdbsum/3ix3 PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 18:		Line 18:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ix3 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

Line 25:		Line 25:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Pseudomonas aeruginosa]]
	[[Category: Nair, S K]]		[[Category: Nair, S K]]
	[[Category: Zou, Y]]		[[Category: Zou, Y]]

OCA at 20:09, 24 December 2014

OCA — Wed, 24 Dec 2014 20:09:58 GMT

←Older revision		Revision as of 20:09, 24 December 2014
Line 8:		Line 8:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ix3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ix3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ix3 RCSB], [http://www.ebi.ac.uk/pdbsum/3ix3 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ix3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ix3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ix3 RCSB], [http://www.ebi.ac.uk/pdbsum/3ix3 PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/LASR_PSEAE LASR_PSEAE]] Transcriptional activator of elastase structural gene (LasB). Binds to the PAI autoinducer.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 15:32, 18 December 2014

OCA — Thu, 18 Dec 2014 15:32:28 GMT

←Older revision		Revision as of 15:32, 18 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3ix3~~\| ~~PDB~~=3ix3 \| ~~SCENE~~= }}	+	==LasR-OC12 HSL complex==
-	===~~LasR~~-~~OC12 HSL complex~~===	+	<StructureSection load='3ix3' size='340' side='right' caption='[[3ix3]], [[Resolution\|resolution]] 1.40Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3ix3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IX3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IX3 FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=OHN:N-3-OXO-DODECANOYL-L-HOMOSERINE+LACTONE'>OHN</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ix4\|3ix4]], [[3ix8\|3ix8]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lasR, PA1430 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 Pseudomonas aeruginosa])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ix3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ix3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ix3 RCSB], [http://www.ebi.ac.uk/pdbsum/3ix3 PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ix/3ix3_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>

-	==~~Function~~==	+	==See Also==
-	[[~~http://www.uniprot.org/uniprot/LASR_PSEAE LASR_PSEAE~~]] ~~Transcriptional activator of elastase structural gene (LasB). Binds to the PAI autoinducer.~~	+	*[[Transcriptional activator\|Transcriptional activator]]
-		+	__TOC__
-	~~==About this Structure==~~	+	</StructureSection>
-	~~[[3ix3]] is a 2 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IX3 OCA].~~	+
	[[Category: Pseudomonas aeruginosa]]		[[Category: Pseudomonas aeruginosa]]
-	[[Category: Nair, S K.]]	+	[[Category: Nair, S K]]
-	[[Category: Zou, Y.]]	+	[[Category: Zou, Y]]
	[[Category: Activator]]		[[Category: Activator]]
	[[Category: Dna-binding]]		[[Category: Dna-binding]]

OCA: Protected "3ix3" [edit=sysop:move=sysop]

OCA — Wed, 27 Mar 2013 09:32:22 GMT

Protected "3ix3" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:32, 27 March 2013

OCA at 09:32, 27 March 2013

OCA — Wed, 27 Mar 2013 09:32:20 GMT

←Older revision		Revision as of 09:32, 27 March 2013
Line 1:		Line 1:
-	{{Seed}}
-	[[Image:3ix3.jpg\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3ix3", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3ix3\| PDB=3ix3 \| SCENE= }}		{{STRUCTURE_3ix3\| PDB=3ix3 \| SCENE= }}
-
	===LasR-OC12 HSL complex===		===LasR-OC12 HSL complex===

		+	==Function==
		+	[[http://www.uniprot.org/uniprot/LASR_PSEAE LASR_PSEAE]] Transcriptional activator of elastase structural gene (LasB). Binds to the PAI autoinducer.

	==About this Structure==		==About this Structure==
-	~~3IX3~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IX3 OCA].	+	[[3ix3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IX3 OCA].
	[[Category: Pseudomonas aeruginosa]]		[[Category: Pseudomonas aeruginosa]]
	[[Category: Nair, S K.]]		[[Category: Nair, S K.]]
Line 25:		Line 17:
	[[Category: Transcription regulation]]		[[Category: Transcription regulation]]
	[[Category: Triphenyl mimic]]		[[Category: Triphenyl mimic]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 16 09:15:55 2009''

OCA at 06:15, 16 September 2009

OCA — Wed, 16 Sep 2009 06:15:56 GMT

←Older revision		Revision as of 06:15, 16 September 2009
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3ix3.jpg\|left\|200px]]

-	The ~~entry 3ix3~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3ix3", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3ix3\| PDB=3ix3 \| SCENE= }}

-	~~Authors: Zou, Y., Nair, S.K.~~	+	===LasR-OC12 HSL complex===

-	Description: LasR-OC12 HSL complex

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 9 09:08:52 2009''	+	==About this Structure==
		+	3IX3 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IX3 OCA].
		+	[[Category: Pseudomonas aeruginosa]]
		+	[[Category: Nair, S K.]]
		+	[[Category: Zou, Y.]]
		+	[[Category: Activator]]
		+	[[Category: Dna-binding]]
		+	[[Category: Quorum sensing]]
		+	[[Category: Quorum sensing receptor]]
		+	[[Category: Transcription]]
		+	[[Category: Transcription regulation]]
		+	[[Category: Triphenyl mimic]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 16 09:15:55 2009''

OCA: New page: '''Unreleased structure''' The entry 3ix3 is ON HOLD Authors: Zou, Y., Nair, S.K. Description: LasR-OC12 HSL complex ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep ...

OCA — Wed, 09 Sep 2009 06:08:53 GMT

New page: '''Unreleased structure''' The entry 3ix3 is ON HOLD Authors: Zou, Y., Nair, S.K. Description: LasR-OC12 HSL complex ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep ...

New page

'''Unreleased structure'''

The entry 3ix3 is ON HOLD

Authors: Zou, Y., Nair, S.K.

Description: LasR-OC12 HSL complex

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 9 09:08:52 2009''