3k12 - Revision history

OCA at 06:42, 31 January 2018

OCA — Wed, 31 Jan 2018 06:42:54 GMT

←Older revision		Revision as of 06:42, 31 January 2018
Line 13:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k1/3k12_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k1/3k12_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 08:23, 1 November 2017

OCA — Wed, 01 Nov 2017 08:23:20 GMT

←Older revision		Revision as of 08:23, 1 November 2017
Line 1:		Line 1:
		+
	==Crystal structure of an uncharacterized protein A6V7T0 from Pseudomonas aeruginosa==		==Crystal structure of an uncharacterized protein A6V7T0 from Pseudomonas aeruginosa==
	<StructureSection load='3k12' size='340' side='right' caption='[[3k12]], [[Resolution\|resolution]] 1.49Å' scene=''>		<StructureSection load='3k12' size='340' side='right' caption='[[3k12]], [[Resolution\|resolution]] 1.49Å' scene=''>
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	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA1568, PSPA7_3761 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA1568, PSPA7_3761 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k12 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k12 OCA], [http://pdbe.org/3k12 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3k12 RCSB], [http://www.ebi.ac.uk/pdbsum/3k12 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k12 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k12 OCA], [http://pdbe.org/3k12 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3k12 RCSB], [http://www.ebi.ac.uk/pdbsum/3k12 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3k12 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 13:28, 7 February 2016

OCA — Sun, 07 Feb 2016 13:28:42 GMT

←Older revision		Revision as of 13:28, 7 February 2016
Line 2:		Line 2:
	<StructureSection load='3k12' size='340' side='right' caption='[[3k12]], [[Resolution\|resolution]] 1.49Å' scene=''>		<StructureSection load='3k12' size='340' side='right' caption='[[3k12]], [[Resolution\|resolution]] 1.49Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3k12]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Pseudomonas_aeruginosa Pseudomonas aeruginosa~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K12 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3K12 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3k12]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K12 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3K12 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA1568, PSPA7_3761 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 ~~Pseudomonas aeruginosa~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA1568, PSPA7_3761 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k12 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k12 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3k12 RCSB], [http://www.ebi.ac.uk/pdbsum/3k12 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k12 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k12 OCA], [http://pdbe.org/3k12 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3k12 RCSB], [http://www.ebi.ac.uk/pdbsum/3k12 PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3k12 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Pseudomonas aeruginosa]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: Burley, S K]]		[[Category: Burley, S K]]

OCA at 13:26, 6 November 2014

OCA — Thu, 06 Nov 2014 13:26:14 GMT

←Older revision		Revision as of 13:26, 6 November 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3k12\| PDB=3k12 \| SCENE= }}~~	+	==Crystal structure of an uncharacterized protein A6V7T0 from Pseudomonas aeruginosa==
-	===Crystal structure of an uncharacterized protein A6V7T0 from Pseudomonas aeruginosa===	+	<StructureSection load='3k12' size='340' side='right' caption='[[3k12]], [[Resolution\|resolution]] 1.49Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[3k12]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K12 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3K12 FirstGlance]. <br>
-	[[3k12]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K12 OCA].	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA1568, PSPA7_3761 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 Pseudomonas aeruginosa])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k12 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k12 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3k12 RCSB], [http://www.ebi.ac.uk/pdbsum/3k12 PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k1/3k12_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Pseudomonas aeruginosa]]		[[Category: Pseudomonas aeruginosa]]
-	[[Category: Almo, S C.]]	+	[[Category: Almo, S C]]
-	[[Category: Burley, S K.]]	+	[[Category: Burley, S K]]
-	[[Category: Ho, M~~.]]~~	+	[[Category: Ho, M]]
-	~~[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]~~	+
-	~~[[Category: Ramagopal, U A.]]~~	+
-	~~[[Category: Toro, R.]]~~	+
-	~~[[Category: New york sgx research center for structural genomic]]~~	+
-	~~[[Category: Nysgxrc]]~~	+
-	~~[[Category: Protein structure initiative]]~~	+
-	~~[[Category: Psi-2~~]]	+
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
		+	[[Category: Ramagopal, U A]]
		+	[[Category: Toro, R]]
		+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
		+	[[Category: PSI, Protein structure initiative]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA: Protected "3k12" [edit=sysop:move=sysop]

OCA — Wed, 27 Mar 2013 09:20:41 GMT

Protected "3k12" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:20, 27 March 2013

OCA at 09:20, 27 March 2013

OCA — Wed, 27 Mar 2013 09:20:38 GMT

←Older revision		Revision as of 09:20, 27 March 2013
Line 1:		Line 1:
-	{{Seed}}
-	[[Image:3k12.jpg\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3k12", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3k12\| PDB=3k12 \| SCENE= }}		{{STRUCTURE_3k12\| PDB=3k12 \| SCENE= }}
-
	===Crystal structure of an uncharacterized protein A6V7T0 from Pseudomonas aeruginosa===		===Crystal structure of an uncharacterized protein A6V7T0 from Pseudomonas aeruginosa===
-

	==About this Structure==		==About this Structure==
-	~~3K12~~ is a 6 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K12 OCA].	+	[[3k12]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K12 OCA].
	[[Category: Pseudomonas aeruginosa]]		[[Category: Pseudomonas aeruginosa]]
	[[Category: Almo, S C.]]		[[Category: Almo, S C.]]
Line 28:		Line 17:
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Unknown function]]		[[Category: Unknown function]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 28 14:02:09 2009''

OCA at 12:02, 28 October 2009

OCA — Wed, 28 Oct 2009 12:02:13 GMT

←Older revision		Revision as of 12:02, 28 October 2009
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3k12.jpg\|left\|200px]]

-	The ~~entry 3k12~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3k12", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3k12\| PDB=3k12 \| SCENE= }}

-	~~Authors: Meng-Chiao, Ho, Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)~~	+	===Crystal structure of an uncharacterized protein A6V7T0 from Pseudomonas aeruginosa===

-	Description: Crystal structure of an uncharacterized protein A6V7T0 from Pseudomonas aeruginosa

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct ~~7 13~~:44:52 2009''	+	==About this Structure==
		+	3K12 is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K12 OCA].
		+	[[Category: Pseudomonas aeruginosa]]
		+	[[Category: Almo, S C.]]
		+	[[Category: Burley, S K.]]
		+	[[Category: Ho, M.]]
		+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
		+	[[Category: Ramagopal, U A.]]
		+	[[Category: Toro, R.]]
		+	[[Category: New york sgx research center for structural genomic]]
		+	[[Category: Nysgxrc]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-2]]
		+	[[Category: Structural genomic]]
		+	[[Category: Unknown function]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 28 14:02:09 2009''

OCA: New page: '''Unreleased structure''' The entry 3k12 is ON HOLD Authors: Meng-Chiao, Ho, Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (...

OCA — Wed, 07 Oct 2009 11:44:53 GMT

New page: '''Unreleased structure''' The entry 3k12 is ON HOLD Authors: Meng-Chiao, Ho, Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (...

New page

'''Unreleased structure'''

The entry 3k12 is ON HOLD

Authors: Meng-Chiao, Ho, Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

Description: Crystal structure of an uncharacterized protein A6V7T0 from Pseudomonas aeruginosa

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 7 13:44:52 2009''