3kgg - Revision history

OCA at 08:15, 6 September 2023

OCA — Wed, 06 Sep 2023 08:15:04 GMT

←Older revision		Revision as of 08:15, 6 September 2023
Line 3:		Line 3:
	<StructureSection load='3kgg' size='340' side='right'caption='[[3kgg]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='3kgg' size='340' side='right'caption='[[3kgg]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3kgg]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Common_european_squid Common european squid~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KGG OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=3KGG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3kgg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Loligo_vulgaris Loligo vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KGG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KGG FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.1Å</td></tr>
-	<tr id='~~activity~~'><td class="sblockLbl"><b>~~Activity~~:</b></td><td class="sblockDat"><~~span class~~='~~plainlinks~~'>~~[http://en.wikipedia.org/wiki/Diisopropyl-fluorophosphatase Diisopropyl-fluorophosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.8.2 3.1.8.2]~~ </~~span~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=3kgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kgg OCA], [~~http~~://pdbe.org/3kgg PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3kgg RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3kgg PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3kgg ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kgg OCA], [https://pdbe.org/3kgg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kgg RCSB], [https://www.ebi.ac.uk/pdbsum/3kgg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kgg ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/DFPA_LOLVU DFPA_LOLVU]] Biological function and substrate unknown. However, it is capable of acting on phosphorus anhydride bonds (such as phosphorus-halide and phosphorus-cyanide) in organophosphorus compounds (including nerve gases).<ref>PMID:15966726</ref>	+	[https://www.uniprot.org/uniprot/DFPA_LOLVU DFPA_LOLVU] Biological function and substrate unknown. However, it is capable of acting on phosphorus anhydride bonds (such as phosphorus-halide and phosphorus-cyanide) in organophosphorus compounds (including nerve gases).<ref>PMID:15966726</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 33:		Line 33:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Common european squid]]
-	[[Category: Diisopropyl-fluorophosphatase]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Blum, M M]]	+	[[Category: Loligo vulgaris]]
-	[[Category: Chen~~, J C.~~H]]	+	[[Category: Blum M-M]]
-	[[Category: Hanson~~, B L~~]]	+	[[Category: Chen JC-H]]
-	[[Category: John, H]]	+	[[Category: Hanson BL]]
-	[[Category: Langan, P]]	+	[[Category: John H]]
-	[[Category: Schoenborn~~, B P~~]]	+	[[Category: Langan P]]
-	[[Category: Tomanicek~~, S J~~]]	+	[[Category: Schoenborn BP]]
-	[[Category: Terjans~~, H R]]~~	+	[[Category: Tomanicek SJ]]
-	~~[[Category: Beta propeller]]~~	+	[[Category: Terjans HR]]
-	~~[[Category: Calcium]]~~	+
-	~~[[Category: Hydrolase]]~~	+
-	~~[[Category: Metal-binding]]~~	+
-	~~[[Category: Phosphotriesterase~~]]	+

OCA at 07:01, 7 October 2020

OCA — Wed, 07 Oct 2020 07:01:43 GMT

←Older revision		Revision as of 07:01, 7 October 2020
Line 1:		Line 1:

	==X-ray structure of perdeuterated diisopropyl fluorophosphatase (DFPase): Perdeuteration of proteins for neutron diffraction==		==X-ray structure of perdeuterated diisopropyl fluorophosphatase (DFPase): Perdeuteration of proteins for neutron diffraction==
-	<StructureSection load='3kgg' size='340' side='right' caption='[[3kgg]], [[Resolution\|resolution]] 2.10Å' scene=''>	+	<StructureSection load='3kgg' size='340' side='right'caption='[[3kgg]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3kgg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Common_european_squid Common european squid]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KGG OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3KGG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3kgg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Common_european_squid Common european squid]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KGG OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3KGG FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Diisopropyl-fluorophosphatase Diisopropyl-fluorophosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.8.2 3.1.8.2] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Diisopropyl-fluorophosphatase Diisopropyl-fluorophosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.8.2 3.1.8.2] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3kgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kgg OCA], [http://pdbe.org/3kgg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3kgg RCSB], [http://www.ebi.ac.uk/pdbsum/3kgg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3kgg ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3kgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kgg OCA], [http://pdbe.org/3kgg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3kgg RCSB], [http://www.ebi.ac.uk/pdbsum/3kgg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3kgg ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 35:		Line 35:
	[[Category: Common european squid]]		[[Category: Common european squid]]
	[[Category: Diisopropyl-fluorophosphatase]]		[[Category: Diisopropyl-fluorophosphatase]]
		+	[[Category: Large Structures]]
	[[Category: Blum, M M]]		[[Category: Blum, M M]]
	[[Category: Chen, J C.H]]		[[Category: Chen, J C.H]]

OCA at 09:44, 26 December 2018

OCA — Wed, 26 Dec 2018 09:44:13 GMT

←Older revision		Revision as of 09:44, 26 December 2018
Line 14:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kg/3kgg_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kg/3kgg_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 44:		Line 44:
	[[Category: Terjans, H R]]		[[Category: Terjans, H R]]
	[[Category: Beta propeller]]		[[Category: Beta propeller]]
		+	[[Category: Calcium]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Metal-binding]]		[[Category: Metal-binding]]
	[[Category: Phosphotriesterase]]		[[Category: Phosphotriesterase]]

OCA at 17:51, 4 August 2016

OCA — Thu, 04 Aug 2016 17:51:14 GMT

←Older revision		Revision as of 17:51, 4 August 2016
Line 1:		Line 1:
		+
	==X-ray structure of perdeuterated diisopropyl fluorophosphatase (DFPase): Perdeuteration of proteins for neutron diffraction==		==X-ray structure of perdeuterated diisopropyl fluorophosphatase (DFPase): Perdeuteration of proteins for neutron diffraction==
	<StructureSection load='3kgg' size='340' side='right' caption='[[3kgg]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='3kgg' size='340' side='right' caption='[[3kgg]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3kgg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Loligo_vulgaris Loligo vulgaris~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KGG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KGG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3kgg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Common_european_squid Common european squid]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KGG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KGG FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Diisopropyl-fluorophosphatase Diisopropyl-fluorophosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.8.2 3.1.8.2] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Diisopropyl-fluorophosphatase Diisopropyl-fluorophosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.8.2 3.1.8.2] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kgg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3kgg RCSB], [http://www.ebi.ac.uk/pdbsum/3kgg PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kgg OCA], [http://pdbe.org/3kgg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3kgg RCSB], [http://www.ebi.ac.uk/pdbsum/3kgg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3kgg ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 18:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kgg ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3kgg" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Common european squid]]
	[[Category: Diisopropyl-fluorophosphatase]]		[[Category: Diisopropyl-fluorophosphatase]]
-	[[Category: Loligo vulgaris]]
	[[Category: Blum, M M]]		[[Category: Blum, M M]]
	[[Category: Chen, J C.H]]		[[Category: Chen, J C.H]]

OCA at 11:36, 25 December 2014

OCA — Thu, 25 Dec 2014 11:36:10 GMT

←Older revision		Revision as of 11:36, 25 December 2014
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kgg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3kgg RCSB], [http://www.ebi.ac.uk/pdbsum/3kgg PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kgg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3kgg RCSB], [http://www.ebi.ac.uk/pdbsum/3kgg PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/DFPA_LOLVU DFPA_LOLVU]] Biological function and substrate unknown. However, it is capable of acting on phosphorus anhydride bonds (such as phosphorus-halide and phosphorus-cyanide) in organophosphorus compounds (including nerve gases).<ref>PMID:15966726</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 15:40, 18 December 2014

OCA — Thu, 18 Dec 2014 15:40:28 GMT

←Older revision		Revision as of 15:40, 18 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3kgg\| PDB=3kgg \| SCENE= }}~~	+	==X-ray structure of perdeuterated diisopropyl fluorophosphatase (DFPase): Perdeuteration of proteins for neutron diffraction==
-	===X-ray structure of perdeuterated diisopropyl fluorophosphatase (DFPase): Perdeuteration of proteins for neutron diffraction===	+	<StructureSection load='3kgg' size='340' side='right' caption='[[3kgg]], [[Resolution\|resolution]] 2.10Å' scene=''>
-	~~{{ABSTRACT_PUBMED_20383004}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3kgg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Loligo_vulgaris Loligo vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KGG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KGG FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Diisopropyl-fluorophosphatase Diisopropyl-fluorophosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.8.2 3.1.8.2] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kgg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3kgg RCSB], [http://www.ebi.ac.uk/pdbsum/3kgg PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kg/3kgg_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The signal-to-noise ratio is one of the limiting factors in neutron macromolecular crystallography. Protein perdeuteration, which replaces all H atoms with deuterium, is a method of improving the signal-to-noise ratio of neutron crystallography experiments by reducing the incoherent scattering of the hydrogen isotope. Detailed analyses of perdeuterated and hydrogenated structures are necessary in order to evaluate the utility of perdeuterated crystals for neutron diffraction studies. The room-temperature X-ray structure of perdeuterated diisopropyl fluorophosphatase (DFPase) is reported at 2.1 A resolution. Comparison with an independently refined hydrogenated room-temperature structure of DFPase revealed no major systematic differences, although the crystals of perdeuterated DFPase did not diffract neutrons. The lack of diffraction is examined with respect to data-collection and crystallographic parameters. The diffraction characteristics of successful neutron structure determinations are presented as a guideline for future neutron diffraction studies of macromolecules. X-ray diffraction to beyond 2.0 A resolution appears to be a strong predictor of successful neutron structures.

-	~~==Function==~~	+	X-ray structure of perdeuterated diisopropyl fluorophosphatase (DFPase): perdeuteration of proteins for neutron diffraction.,Blum MM, Tomanicek SJ, John H, Hanson BL, Ruterjans H, Schoenborn BP, Langan P, Chen JC Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Apr 1;66(Pt, 4):379-85. Epub 2010 Mar 26. PMID:20383004<ref>PMID:20383004</ref>
-	~~[[http~~:~~//www.uniprot~~.~~org/uniprot/DFPA_LOLVU DFPA_LOLVU]] Biological function and substrate unknown. However~~, ~~it is capable of acting on phosphorus anhydride bonds~~ (~~such as phosphorus-halide and phosphorus-cyanide) in organophosphorus compounds (including nerve gases~~).<ref>PMID:~~15966726~~</ref>	+

-	~~==About this Structure==~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~[[3kgg]] is~~ a ~~1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Loligo_vulgaris Loligo vulgaris]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3KGG OCA].~~	+	</div>
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	~~<ref group="xtra">PMID:020383004</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Diisopropyl-fluorophosphatase]]		[[Category: Diisopropyl-fluorophosphatase]]
	[[Category: Loligo vulgaris]]		[[Category: Loligo vulgaris]]
-	[[Category: Blum, M M.]]	+	[[Category: Blum, M M]]
-	[[Category: Chen, J C.H.]]	+	[[Category: Chen, J C.H]]
-	[[Category: Hanson, B L.]]	+	[[Category: Hanson, B L]]
-	[[Category: John, H.]]	+	[[Category: John, H]]
-	[[Category: Langan, P.]]	+	[[Category: Langan, P]]
-	[[Category: Schoenborn, B P.]]	+	[[Category: Schoenborn, B P]]
-	[[Category: Tomanicek, S J.]]	+	[[Category: Tomanicek, S J]]
-	[[Category: Terjans, H R.]]	+	[[Category: Terjans, H R]]
	[[Category: Beta propeller]]		[[Category: Beta propeller]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Metal-binding]]		[[Category: Metal-binding]]
	[[Category: Phosphotriesterase]]		[[Category: Phosphotriesterase]]

OCA: Protected "3kgg" [edit=sysop:move=sysop]

OCA — Thu, 04 Apr 2013 02:42:11 GMT

Protected "3kgg" [edit=sysop:move=sysop]

←Older revision

Revision as of 02:42, 4 April 2013

OCA at 02:42, 4 April 2013

OCA — Thu, 04 Apr 2013 02:42:03 GMT

←Older revision		Revision as of 02:42, 4 April 2013
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-	{{Seed}}
-	[[Image:3kgg.png\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3kgg", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3kgg\| PDB=3kgg \| SCENE= }}		{{STRUCTURE_3kgg\| PDB=3kgg \| SCENE= }}
-
	===X-ray structure of perdeuterated diisopropyl fluorophosphatase (DFPase): Perdeuteration of proteins for neutron diffraction===		===X-ray structure of perdeuterated diisopropyl fluorophosphatase (DFPase): Perdeuteration of proteins for neutron diffraction===
		+	{{ABSTRACT_PUBMED_20383004}}

-		+	==Function==
-	~~<!--~~	+	[[http://www.uniprot.org/uniprot/DFPA_LOLVU DFPA_LOLVU]] Biological function and substrate unknown. However, it is capable of acting on phosphorus anhydride bonds (such as phosphorus-halide and phosphorus-cyanide) in organophosphorus compounds (including nerve gases).<ref>PMID:15966726</ref>
-	~~The line below this paragraph, {{ABSTRACT_PUBMED_20383004}}, adds the Publication Abstract to the page~~	+
-	~~(as it appears on PubMed at~~ http://www.~~pubmed~~.~~gov)~~, ~~where 20383004~~ is ~~the PubMed ID number.~~	+
-	-->	+
-	~~{{ABSTRACT_PUBMED_20383004}}~~	+

	==About this Structure==		==About this Structure==
-	~~3KGG~~ is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Loligo_vulgaris Loligo vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KGG OCA].	+	[[3kgg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Loligo_vulgaris Loligo vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KGG OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~20383004~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:020383004</ref><references group="xtra"/><references/>
	[[Category: Diisopropyl-fluorophosphatase]]		[[Category: Diisopropyl-fluorophosphatase]]
	[[Category: Loligo vulgaris]]		[[Category: Loligo vulgaris]]
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	[[Category: Terjans, H R.]]		[[Category: Terjans, H R.]]
	[[Category: Beta propeller]]		[[Category: Beta propeller]]
-	[[Category: Calcium]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Metal-binding]]		[[Category: Metal-binding]]
	[[Category: Phosphotriesterase]]		[[Category: Phosphotriesterase]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 28 10:53:50 2010''

OCA at 07:53, 28 April 2010

OCA — Wed, 28 Apr 2010 07:53:51 GMT

←Older revision		Revision as of 07:53, 28 April 2010
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	{{Seed}}		{{Seed}}
-	[[Image:3kgg.~~jpg~~\|left\|200px]]	+	[[Image:3kgg.png\|left\|200px]]

	<!--		<!--
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	===X-ray structure of perdeuterated diisopropyl fluorophosphatase (DFPase): Perdeuteration of proteins for neutron diffraction===		===X-ray structure of perdeuterated diisopropyl fluorophosphatase (DFPase): Perdeuteration of proteins for neutron diffraction===

		+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_20383004}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 20383004 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_20383004}}

	==About this Structure==		==About this Structure==
	3KGG is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Loligo_vulgaris Loligo vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KGG OCA].		3KGG is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Loligo_vulgaris Loligo vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KGG OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:20383004</ref><references group="xtra"/>
	[[Category: Diisopropyl-fluorophosphatase]]		[[Category: Diisopropyl-fluorophosphatase]]
	[[Category: Loligo vulgaris]]		[[Category: Loligo vulgaris]]
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	[[Category: Phosphotriesterase]]		[[Category: Phosphotriesterase]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 7 10:48:51 2010''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 28 10:53:50 2010''

OCA at 07:48, 7 April 2010

OCA — Wed, 07 Apr 2010 07:48:53 GMT

←Older revision		Revision as of 07:48, 7 April 2010
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-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3kgg.jpg\|left\|200px]]

-	The ~~entry 3kgg~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3kgg", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3kgg\| PDB=3kgg \| SCENE= }}

-	~~Authors~~: ~~Blum, M.-M., Tomanicek, S.J., John, H., Hanson, B.L., terjans, H.R., Schoenborn, B.P., Langan, P., Chen, J.C.-H.~~	+	===X-ray structure of perdeuterated diisopropyl fluorophosphatase (DFPase): Perdeuteration of proteins for neutron diffraction===

-	Description: X-ray structure of perdeuterated diisopropyl fluorophosphatase (DFPase): Perdeuteration of proteins for neutron diffraction

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Nov 18 18~~:55:~~26 2009~~''	+	==About this Structure==
		+	3KGG is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Loligo_vulgaris Loligo vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KGG OCA].
		+	[[Category: Diisopropyl-fluorophosphatase]]
		+	[[Category: Loligo vulgaris]]
		+	[[Category: Blum, M M.]]
		+	[[Category: Chen, J C.H.]]
		+	[[Category: Hanson, B L.]]
		+	[[Category: John, H.]]
		+	[[Category: Langan, P.]]
		+	[[Category: Schoenborn, B P.]]
		+	[[Category: Tomanicek, S J.]]
		+	[[Category: Terjans, H R.]]
		+	[[Category: Beta propeller]]
		+	[[Category: Calcium]]
		+	[[Category: Hydrolase]]
		+	[[Category: Metal-binding]]
		+	[[Category: Phosphotriesterase]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 7 10:48:51 2010''