3kh5 - Revision history

OCA at 10:17, 21 February 2024

OCA — Wed, 21 Feb 2024 10:17:00 GMT

←Older revision		Revision as of 10:17, 21 February 2024
Line 1:		Line 1:

	==Crystal Structure of Protein MJ1225 from Methanocaldococcus jannaschii, a putative archaeal homolog of g-AMPK.==		==Crystal Structure of Protein MJ1225 from Methanocaldococcus jannaschii, a putative archaeal homolog of g-AMPK.==
-	<StructureSection load='3kh5' size='340' side='right' caption='[[3kh5]], [[Resolution\|resolution]] 2.10Å' scene=''>	+	<StructureSection load='3kh5' size='340' side='right'caption='[[3kh5]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3kh5]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Atcc_43067 Atcc 43067~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KH5 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3KH5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3kh5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KH5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KH5 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=ADP:ADENOSINE~~-~~5-DIPHOSPHATE'>ADP</scene>~~, ~~<scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.1Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~MJ1225 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode~~=~~Info&srchmode~~=5~~&id=2190 ATCC 43067])</td~~></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<~~tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks~~'>[http://en.wikipedia.org/wiki/Hydroxymethylglutaryl-CoA_reductase_(NADPH) Hydroxymethylglutaryl-CoA reductase (NADPH)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.34 1.1.1.34] </~~span~~></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kh5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kh5 OCA], [https://pdbe.org/3kh5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kh5 RCSB], [https://www.ebi.ac.uk/pdbsum/3kh5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kh5 ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3kh5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kh5 OCA], [~~http~~://pdbe.org/3kh5 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3kh5 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3kh5 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3kh5 ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Y1225_METJA Y1225_METJA]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 19:		Line 20:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kh5 ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kh5 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
-	<div style="background-color:#fffaf0;">
-	== Publication Abstract from PubMed ==
-	In mammals, 5'-AMP-activated protein kinase (AMPK) is a heterotrimeric protein composed of a catalytic serine/threonine kinase subunit (alpha) and two regulatory subunits (beta and gamma). The gamma-subunit senses the intracellular energy status by competitively binding AMP and ATP and is thought to be responsible for allosteric regulation of the whole complex. We describe herein the crystal structure of protein MJ1225 from Methanocaldococcus jannaschii complexed to AMP, ADP, and ATP. Our data provide evidence of a strong conservation of the key functional features seen in the gamma-subunit of the eukaryotic AMPK, and more importantly, it reveals a novel AMP binding site, herein denoted as site E, which had not been previously described in cystathionine beta-synthase domains so far. Site E is located in a small cavity existing between the alpha-helices structurally equivalent to those disrupting the internal symmetry of each Bateman domain in gamma-AMPKs and shows striking similarities with a symmetry-related crevice of the mammalian enzyme that hosts the pathological mutation N488I.
-
-	The crystal structure of protein MJ1225 from Methanocaldococcus jannaschii shows strong conservation of key structural features seen in the eukaryal gamma-AMPK.,Gomez-Garcia I, Oyenarte I, Martinez-Cruz LA J Mol Biol. 2010 May 28;399(1):53-70. Epub 2010 Apr 9. PMID:20382158<ref>PMID:20382158</ref>
-
-	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	</div>
-	<div class="pdbe-citations 3kh5" style="background-color:#fffaf0;"></div>
-	== References ==
-	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Atcc 43067]]~~	+	[[Category: Large Structures]]
-	~~[[Category: Garcia, I Gomez]]~~	+
-	~~[[Category: Martinez-Cruz, L A]]~~	+
-	~~[[Category: Oyenarte, I]]~~	+
-	~~[[Category: Adp]]~~	+
-	~~[[Category: Amp]]~~	+
-	~~[[Category: Ampk]]~~	+
-	~~[[Category: Archaea]]~~	+
-	~~[[Category: Atp]]~~	+
-	~~[[Category: Cbs domain~~]]	+
	[[Category: Methanocaldococcus jannaschii]]		[[Category: Methanocaldococcus jannaschii]]
-	[[Category: ~~Mj1225~~]]	+	[[Category: Gomez Garcia I]]
-	[[Category: ~~Unknown function~~]]	+	[[Category: Martinez-Cruz LA]]
		+	[[Category: Oyenarte I]]

OCA at 09:34, 26 December 2018

OCA — Wed, 26 Dec 2018 09:34:46 GMT

←Older revision		Revision as of 09:34, 26 December 2018
Line 13:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kh/3kh5_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kh/3kh5_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 40:		Line 40:
	[[Category: Ampk]]		[[Category: Ampk]]
	[[Category: Archaea]]		[[Category: Archaea]]
		+	[[Category: Atp]]
	[[Category: Cbs domain]]		[[Category: Cbs domain]]
	[[Category: Methanocaldococcus jannaschii]]		[[Category: Methanocaldococcus jannaschii]]
	[[Category: Mj1225]]		[[Category: Mj1225]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA at 19:47, 4 August 2016

OCA — Thu, 04 Aug 2016 19:47:04 GMT

←Older revision		Revision as of 19:47, 4 August 2016
Line 1:		Line 1:
		+
	==Crystal Structure of Protein MJ1225 from Methanocaldococcus jannaschii, a putative archaeal homolog of g-AMPK.==		==Crystal Structure of Protein MJ1225 from Methanocaldococcus jannaschii, a putative archaeal homolog of g-AMPK.==
	<StructureSection load='3kh5' size='340' side='right' caption='[[3kh5]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='3kh5' size='340' side='right' caption='[[3kh5]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3kh5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Methanocaldococcus_jannaschii Methanocaldococcus jannaschii~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KH5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KH5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3kh5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KH5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KH5 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">MJ1225 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 ~~Methanocaldococcus jannaschii~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">MJ1225 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 ATCC 43067])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Hydroxymethylglutaryl-CoA_reductase_(NADPH) Hydroxymethylglutaryl-CoA reductase (NADPH)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.34 1.1.1.34] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Hydroxymethylglutaryl-CoA_reductase_(NADPH) Hydroxymethylglutaryl-CoA reductase (NADPH)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.34 1.1.1.34] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kh5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kh5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3kh5 RCSB], [http://www.ebi.ac.uk/pdbsum/3kh5 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kh5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kh5 OCA], [http://pdbe.org/3kh5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3kh5 RCSB], [http://www.ebi.ac.uk/pdbsum/3kh5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3kh5 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 16:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kh5 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 26:		Line 27:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3kh5" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Methanocaldococcus jannaschii~~]]	+	[[Category: Atcc 43067]]
	[[Category: Garcia, I Gomez]]		[[Category: Garcia, I Gomez]]
	[[Category: Martinez-Cruz, L A]]		[[Category: Martinez-Cruz, L A]]
Line 39:		Line 41:
	[[Category: Archaea]]		[[Category: Archaea]]
	[[Category: Cbs domain]]		[[Category: Cbs domain]]
		+	[[Category: Methanocaldococcus jannaschii]]
	[[Category: Mj1225]]		[[Category: Mj1225]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA at 17:10, 18 December 2014

OCA — Thu, 18 Dec 2014 17:10:23 GMT

←Older revision		Revision as of 17:10, 18 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3kh5\| PDB=3kh5 \| SCENE= }}~~	+	==Crystal Structure of Protein MJ1225 from Methanocaldococcus jannaschii, a putative archaeal homolog of g-AMPK.==
-	===Crystal Structure of Protein MJ1225 from Methanocaldococcus jannaschii, a putative archaeal homolog of g-AMPK.===	+	<StructureSection load='3kh5' size='340' side='right' caption='[[3kh5]], [[Resolution\|resolution]] 2.10Å' scene=''>
-	~~{{ABSTRACT_PUBMED_20382158}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3kh5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KH5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KH5 FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">MJ1225 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 Methanocaldococcus jannaschii])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Hydroxymethylglutaryl-CoA_reductase_(NADPH) Hydroxymethylglutaryl-CoA reductase (NADPH)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.34 1.1.1.34] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kh5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kh5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3kh5 RCSB], [http://www.ebi.ac.uk/pdbsum/3kh5 PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kh/3kh5_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	In mammals, 5'-AMP-activated protein kinase (AMPK) is a heterotrimeric protein composed of a catalytic serine/threonine kinase subunit (alpha) and two regulatory subunits (beta and gamma). The gamma-subunit senses the intracellular energy status by competitively binding AMP and ATP and is thought to be responsible for allosteric regulation of the whole complex. We describe herein the crystal structure of protein MJ1225 from Methanocaldococcus jannaschii complexed to AMP, ADP, and ATP. Our data provide evidence of a strong conservation of the key functional features seen in the gamma-subunit of the eukaryotic AMPK, and more importantly, it reveals a novel AMP binding site, herein denoted as site E, which had not been previously described in cystathionine beta-synthase domains so far. Site E is located in a small cavity existing between the alpha-helices structurally equivalent to those disrupting the internal symmetry of each Bateman domain in gamma-AMPKs and shows striking similarities with a symmetry-related crevice of the mammalian enzyme that hosts the pathological mutation N488I.

-	~~==About this Structure==~~	+	The crystal structure of protein MJ1225 from Methanocaldococcus jannaschii shows strong conservation of key structural features seen in the eukaryal gamma-AMPK.,Gomez-Garcia I, Oyenarte I, Martinez-Cruz LA J Mol Biol. 2010 May 28;399(1):53-70. Epub 2010 Apr 9. PMID:20382158<ref>PMID:20382158</ref>
-	~~[[3kh5]] is a 1 chain~~ structure ~~with sequence~~ from ~~[http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii~~ Methanocaldococcus jannaschii]. ~~Full crystallographic information is available from [http~~:~~//oca~~.~~weizmann~~.~~ac.il~~/~~oca-bin/ocashort?id=3KH5 OCA].~~	+

-	~~==Reference==~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	<~~ref group="xtra"~~>~~PMID:020382158~~</~~ref~~>~~<ref group~~=~~"xtra">PMID:019652347</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	</div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Methanocaldococcus jannaschii]]		[[Category: Methanocaldococcus jannaschii]]
-	[[Category: Garcia, I Gomez.]]	+	[[Category: Garcia, I Gomez]]
-	[[Category: Martinez-Cruz, L A.]]	+	[[Category: Martinez-Cruz, L A]]
-	[[Category: Oyenarte, I.]]	+	[[Category: Oyenarte, I]]
	[[Category: Adp]]		[[Category: Adp]]
	[[Category: Amp]]		[[Category: Amp]]
Line 17:		Line 39:
	[[Category: Archaea]]		[[Category: Archaea]]
	[[Category: Cbs domain]]		[[Category: Cbs domain]]
-	[[Category: Methanocaldococcus jannaschii.]]
	[[Category: Mj1225]]		[[Category: Mj1225]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA at 02:26, 4 April 2013

OCA — Thu, 04 Apr 2013 02:26:11 GMT

←Older revision		Revision as of 02:26, 4 April 2013
Line 1:		Line 1:
-	[[Image:3kh5.png\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3kh5", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3kh5\| PDB=3kh5 \| SCENE= }}		{{STRUCTURE_3kh5\| PDB=3kh5 \| SCENE= }}
-
	===Crystal Structure of Protein MJ1225 from Methanocaldococcus jannaschii, a putative archaeal homolog of g-AMPK.===		===Crystal Structure of Protein MJ1225 from Methanocaldococcus jannaschii, a putative archaeal homolog of g-AMPK.===
-
-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_20382158}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 20382158 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_20382158}}		{{ABSTRACT_PUBMED_20382158}}

Line 22:		Line 7:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~20382158~~</ref><ref group="xtra">PMID:~~19652347~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:020382158</ref><ref group="xtra">PMID:019652347</ref><references group="xtra"/><references/>
	[[Category: Methanocaldococcus jannaschii]]		[[Category: Methanocaldococcus jannaschii]]
	[[Category: Garcia, I Gomez.]]		[[Category: Garcia, I Gomez.]]
Line 31:		Line 16:
	[[Category: Ampk]]		[[Category: Ampk]]
	[[Category: Archaea]]		[[Category: Archaea]]
-	[[Category: Atp]]
	[[Category: Cbs domain]]		[[Category: Cbs domain]]
	[[Category: Methanocaldococcus jannaschii.]]		[[Category: Methanocaldococcus jannaschii.]]
	[[Category: Mj1225]]		[[Category: Mj1225]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA: Protected "3kh5" [edit=sysop:move=sysop]

OCA — Mon, 14 Mar 2011 22:35:14 GMT

Protected "3kh5" [edit=sysop:move=sysop]

←Older revision

Revision as of 22:35, 14 March 2011

OCA at 22:35, 14 March 2011

OCA — Mon, 14 Mar 2011 22:35:11 GMT

←Older revision		Revision as of 22:35, 14 March 2011
Line 1:		Line 1:
-	~~{{Seed}}~~	+	[[Image:3kh5.png\|left\|200px]]
-	[[Image:3kh5.~~jpg~~\|left\|200px]]	+

	<!--		<!--
Line 20:		Line 19:

	==About this Structure==		==About this Structure==
-	~~3KH5~~ is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KH5 OCA].	+	[[3kh5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KH5 OCA].

	==Reference==		==Reference==
Line 37:		Line 36:
	[[Category: Mj1225]]		[[Category: Mj1225]]
	[[Category: Unknown function]]		[[Category: Unknown function]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 21 10:22:00 2010''

OCA at 07:22, 21 April 2010

OCA — Wed, 21 Apr 2010 07:22:02 GMT

←Older revision		Revision as of 07:22, 21 April 2010
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3kh5.jpg\|left\|200px]]

-	The ~~entry 3kh5~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3kh5", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3kh5\| PDB=3kh5 \| SCENE= }}

-	~~Authors: Gomez Garcia~~, ~~I., Oyenarte, I., Martinez~~-~~Cruz, L.A~~.	+	===Crystal Structure of Protein MJ1225 from Methanocaldococcus jannaschii, a putative archaeal homolog of g-AMPK.===

-	Description: Crystal Structure of Protein MJ1225 from Methanocaldococcus jannaschii, a putative archaeal homolog of g-AMPK.

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Nov 18 18~~:55:~~53 2009~~''	+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_20382158}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 20382158 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_20382158}}
		+
		+	==About this Structure==
		+	3KH5 is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KH5 OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:20382158</ref><ref group="xtra">PMID:19652347</ref><references group="xtra"/>
		+	[[Category: Methanocaldococcus jannaschii]]
		+	[[Category: Garcia, I Gomez.]]
		+	[[Category: Martinez-Cruz, L A.]]
		+	[[Category: Oyenarte, I.]]
		+	[[Category: Adp]]
		+	[[Category: Amp]]
		+	[[Category: Ampk]]
		+	[[Category: Archaea]]
		+	[[Category: Atp]]
		+	[[Category: Cbs domain]]
		+	[[Category: Methanocaldococcus jannaschii.]]
		+	[[Category: Mj1225]]
		+	[[Category: Unknown function]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 21 10:22:00 2010''

OCA: New page: '''Unreleased structure''' The entry 3kh5 is ON HOLD until Paper Publication Authors: Gomez Garcia, I., Oyenarte, I., Martinez-Cruz, L.A. Description: Crystal Structure of Protein MJ12...

OCA — Wed, 18 Nov 2009 16:55:53 GMT

New page: '''Unreleased structure''' The entry 3kh5 is ON HOLD until Paper Publication Authors: Gomez Garcia, I., Oyenarte, I., Martinez-Cruz, L.A. Description: Crystal Structure of Protein MJ12...

New page

'''Unreleased structure'''

The entry 3kh5 is ON HOLD until Paper Publication

Authors: Gomez Garcia, I., Oyenarte, I., Martinez-Cruz, L.A.

Description: Crystal Structure of Protein MJ1225 from Methanocaldococcus jannaschii, a putative archaeal homolog of g-AMPK.

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 18 18:55:53 2009''