3khy - Revision history

OCA at 09:02, 26 December 2018

OCA — Wed, 26 Dec 2018 09:02:40 GMT

←Older revision		Revision as of 09:02, 26 December 2018
Line 1:		Line 1:
		+
	==Crystal Structure of a propionate kinase from Francisella tularensis subsp. tularensis SCHU S4==		==Crystal Structure of a propionate kinase from Francisella tularensis subsp. tularensis SCHU S4==
	<StructureSection load='3khy' size='340' side='right' caption='[[3khy]], [[Resolution\|resolution]] 1.98Å' scene=''>		<StructureSection load='3khy' size='340' side='right' caption='[[3khy]], [[Resolution\|resolution]] 1.98Å' scene=''>
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	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">FTT1753, FTT_1753, tdcD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=119856 "Francisella tularensis subsp. nearctica" Olsufjev 1970])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">FTT1753, FTT_1753, tdcD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=119856 "Francisella tularensis subsp. nearctica" Olsufjev 1970])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3khy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3khy OCA], [http://pdbe.org/3khy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3khy RCSB], [http://www.ebi.ac.uk/pdbsum/3khy PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3khy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3khy OCA], [http://pdbe.org/3khy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3khy RCSB], [http://www.ebi.ac.uk/pdbsum/3khy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3khy ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 11:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kh/3khy_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kh/3khy_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 00:36, 9 February 2016

OCA — Tue, 09 Feb 2016 00:36:24 GMT

←Older revision		Revision as of 00:36, 9 February 2016
Line 5:		Line 5:
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">FTT1753, FTT_1753, tdcD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=119856 "Francisella tularensis subsp. nearctica" Olsufjev 1970])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">FTT1753, FTT_1753, tdcD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=119856 "Francisella tularensis subsp. nearctica" Olsufjev 1970])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3khy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3khy OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3khy RCSB], [http://www.ebi.ac.uk/pdbsum/3khy PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3khy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3khy OCA], [http://pdbe.org/3khy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3khy RCSB], [http://www.ebi.ac.uk/pdbsum/3khy PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3khy ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 08:59, 20 January 2015

OCA — Tue, 20 Jan 2015 08:59:02 GMT

←Older revision		Revision as of 08:59, 20 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3khy]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"francisella_tularensis_subsp._nearctica"_olsufjev_1970 "francisella tularensis subsp. nearctica" olsufjev 1970]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KHY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KHY FirstGlance]. <br>		<table><tr><td colspan='2'>[[3khy]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"francisella_tularensis_subsp._nearctica"_olsufjev_1970 "francisella tularensis subsp. nearctica" olsufjev 1970]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KHY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KHY FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">FTT1753, FTT_1753, tdcD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=119856 "Francisella tularensis subsp. nearctica" Olsufjev 1970])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">FTT1753, FTT_1753, tdcD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=119856 "Francisella tularensis subsp. nearctica" Olsufjev 1970])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3khy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3khy OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3khy RCSB], [http://www.ebi.ac.uk/pdbsum/3khy PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3khy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3khy OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3khy RCSB], [http://www.ebi.ac.uk/pdbsum/3khy PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Francisella tularensis subsp. nearctica olsufjev 1970]]		[[Category: Francisella tularensis subsp. nearctica olsufjev 1970]]
-	[[Category: Anderson, W F.]]	+	[[Category: Anderson, W F]]
-	[[Category: Brunzelle, J S.]]	+	[[Category: Brunzelle, J S]]
-	[[Category: ~~CSGID, Center for~~ Structural ~~Genomics of Infectious Diseases.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Savchenko, A.]]	+	[[Category: Savchenko, A]]
-	[[Category: Sharma, S.]]	+	[[Category: Sharma, S]]
-	[[Category: Skarina, T.]]	+	[[Category: Skarina, T]]
-	[[Category: Wang, Y.]]	+	[[Category: Wang, Y]]
	[[Category: Atp-binding]]		[[Category: Atp-binding]]
-	[[Category: Center for structural genomics of infectious disease]]
	[[Category: Csgid]]		[[Category: Csgid]]
	[[Category: Department of health and human service]]		[[Category: Department of health and human service]]
Line 37:		Line 36:
	[[Category: Nucleotide-binding]]		[[Category: Nucleotide-binding]]
	[[Category: Propionate kinase]]		[[Category: Propionate kinase]]
-	[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA at 22:02, 1 October 2014

OCA — Wed, 01 Oct 2014 22:02:39 GMT

←Older revision		Revision as of 22:02, 1 October 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3khy\| PDB=3khy \| SCENE= }}~~	+	==Crystal Structure of a propionate kinase from Francisella tularensis subsp. tularensis SCHU S4==
-	===Crystal Structure of a propionate kinase from Francisella tularensis subsp. tularensis SCHU S4===	+	<StructureSection load='3khy' size='340' side='right' caption='[[3khy]], [[Resolution\|resolution]] 1.98Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[3khy]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"francisella_tularensis_subsp._nearctica"_olsufjev_1970 "francisella tularensis subsp. nearctica" olsufjev 1970]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KHY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KHY FirstGlance]. <br>
-	[[3khy]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Francisella_tularensis_subsp~~.~~_tularensis Francisella~~ tularensis subsp. ~~tularensis~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KHY OCA].	+	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	[[~~Category~~: Francisella tularensis subsp. tularensis]]	+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">FTT1753, FTT_1753, tdcD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=119856 "Francisella tularensis subsp. nearctica" Olsufjev 1970])</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3khy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3khy OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3khy RCSB], [http://www.ebi.ac.uk/pdbsum/3khy PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kh/3khy_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Francisella tularensis subsp. nearctica olsufjev 1970]]
	[[Category: Anderson, W F.]]		[[Category: Anderson, W F.]]
	[[Category: Brunzelle, J S.]]		[[Category: Brunzelle, J S.]]
-	[[Category: ~~Csgid~~]]	+	[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
	[[Category: Savchenko, A.]]		[[Category: Savchenko, A.]]
	[[Category: Sharma, S.]]		[[Category: Sharma, S.]]

OCA: Protected "3khy" [edit=sysop:move=sysop]

OCA — Thu, 04 Apr 2013 02:18:51 GMT

Protected "3khy" [edit=sysop:move=sysop]

←Older revision

Revision as of 02:18, 4 April 2013

OCA at 02:18, 4 April 2013

OCA — Thu, 04 Apr 2013 02:18:50 GMT

←Older revision		Revision as of 02:18, 4 April 2013
Line 1:		Line 1:
-	{{Seed}}
-	[[Image:3khy.jpg\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3khy", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3khy\| PDB=3khy \| SCENE= }}		{{STRUCTURE_3khy\| PDB=3khy \| SCENE= }}
-
	===Crystal Structure of a propionate kinase from Francisella tularensis subsp. tularensis SCHU S4===		===Crystal Structure of a propionate kinase from Francisella tularensis subsp. tularensis SCHU S4===
-

	==About this Structure==		==About this Structure==
-	~~3KHY~~ is a 2 ~~chains~~ structure with ~~sequences~~ from [http://en.wikipedia.org/wiki/Francisella_tularensis_subsp._tularensis Francisella tularensis subsp. tularensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KHY OCA].	+	[[3khy]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Francisella_tularensis_subsp._tularensis Francisella tularensis subsp. tularensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KHY OCA].
	[[Category: Francisella tularensis subsp. tularensis]]		[[Category: Francisella tularensis subsp. tularensis]]
	[[Category: Anderson, W F.]]		[[Category: Anderson, W F.]]
Line 35:		Line 24:
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 20 15:59:26 2010''

OCA at 13:59, 20 January 2010

OCA — Wed, 20 Jan 2010 13:59:27 GMT

←Older revision		Revision as of 13:59, 20 January 2010
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3khy.jpg\|left\|200px]]

-	The ~~entry 3khy~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3khy", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3khy\| PDB=3khy \| SCENE= }}

-	~~Authors: Brunzelle, J~~.~~S., Skarina, T., Sharma, S., Wang, Y., Savchenko, A., Anderson, W.F., Csgid~~	+	===Crystal Structure of a propionate kinase from Francisella tularensis subsp. tularensis SCHU S4===

-	Description: Crystal Structure of a propionate kinase from Francisella tularensis subsp. tularensis SCHU S4

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Nov 25 09~~:12:~~49 2009~~''	+	==About this Structure==
		+	3KHY is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Francisella_tularensis_subsp._tularensis Francisella tularensis subsp. tularensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KHY OCA].
		+	[[Category: Francisella tularensis subsp. tularensis]]
		+	[[Category: Anderson, W F.]]
		+	[[Category: Brunzelle, J S.]]
		+	[[Category: Csgid]]
		+	[[Category: Savchenko, A.]]
		+	[[Category: Sharma, S.]]
		+	[[Category: Skarina, T.]]
		+	[[Category: Wang, Y.]]
		+	[[Category: Atp-binding]]
		+	[[Category: Center for structural genomics of infectious disease]]
		+	[[Category: Csgid]]
		+	[[Category: Department of health and human service]]
		+	[[Category: Idp01739]]
		+	[[Category: Kinase]]
		+	[[Category: National institute of allergy and infectious disease]]
		+	[[Category: National institutes of health]]
		+	[[Category: Nucleotide-binding]]
		+	[[Category: Propionate kinase]]
		+	[[Category: Structural genomic]]
		+	[[Category: Transferase]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 20 15:59:26 2010''

OCA at 07:12, 25 November 2009

OCA — Wed, 25 Nov 2009 07:12:49 GMT

←Older revision		Revision as of 07:12, 25 November 2009
Line 3:		Line 3:
	The entry 3khy is ON HOLD		The entry 3khy is ON HOLD

-	Authors: Brunzelle, J.S., Skarina, T, Sharma, S, Wang, Y, Savchenko, A., Anderson, W.F., Csgid	+	Authors: Brunzelle, J.S., Skarina, T., Sharma, S., Wang, Y., Savchenko, A., Anderson, W.F., Csgid

	Description: Crystal Structure of a propionate kinase from Francisella tularensis subsp. tularensis SCHU S4		Description: Crystal Structure of a propionate kinase from Francisella tularensis subsp. tularensis SCHU S4

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov ~~18 18~~:56:22 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 25 09:12:49 2009''

OCA: New page: '''Unreleased structure''' The entry 3khy is ON HOLD Authors: Brunzelle, J.S., Skarina, T, Sharma, S, Wang, Y, Savchenko, A., Anderson, W.F., Csgid Description: Crystal Structure of a ...

OCA — Wed, 18 Nov 2009 16:56:22 GMT

New page: '''Unreleased structure''' The entry 3khy is ON HOLD Authors: Brunzelle, J.S., Skarina, T, Sharma, S, Wang, Y, Savchenko, A., Anderson, W.F., Csgid Description: Crystal Structure of a ...

New page

'''Unreleased structure'''

The entry 3khy is ON HOLD

Authors: Brunzelle, J.S., Skarina, T, Sharma, S, Wang, Y, Savchenko, A., Anderson, W.F., Csgid

Description: Crystal Structure of a propionate kinase from Francisella tularensis subsp. tularensis SCHU S4

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 18 18:56:22 2009''