3m2p - Revision history

OCA at 07:49, 9 January 2019

OCA — Wed, 09 Jan 2019 07:49:33 GMT

←Older revision		Revision as of 07:49, 9 January 2019
Line 14:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m2/3m2p_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m2/3m2p_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 21:25, 11 August 2016

OCA — Thu, 11 Aug 2016 21:25:00 GMT

←Older revision		Revision as of 21:25, 11 August 2016
Line 1:		Line 1:
		+
	==The crystal structure of UDP-N-acetylglucosamine 4-epimerase from Bacillus cereus==		==The crystal structure of UDP-N-acetylglucosamine 4-epimerase from Bacillus cereus==
	<StructureSection load='3m2p' size='340' side='right' caption='[[3m2p]], [[Resolution\|resolution]] 2.95Å' scene=''>		<StructureSection load='3m2p' size='340' side='right' caption='[[3m2p]], [[Resolution\|resolution]] 2.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3m2p]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacillus_cereus Bacillus cereus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M2P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3M2P FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3m2p]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Baccr Baccr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M2P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3M2P FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BC_5271 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~1396 Bacillus cereus~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BC_5271 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226900 BACCR])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/~~UDP-N-acetylglucosamine_4-epimerase UDP-N-acetylglucosamine 4-epimerase~~], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.3.7 5.1.3.7] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Isomerase Isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.3.7 5.1.3.7] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3m2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m2p OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3m2p RCSB], [http://www.ebi.ac.uk/pdbsum/3m2p PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3m2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m2p OCA], [http://pdbe.org/3m2p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3m2p RCSB], [http://www.ebi.ac.uk/pdbsum/3m2p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3m2p ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 17:		Line 18:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3m2p ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacillus cereus~~]]	+	[[Category: Baccr]]
-	[[Category: ~~UDP-N-acetylglucosamine 4-epimerase~~]]	+	[[Category: Isomerase]]
	[[Category: Burley, S K]]		[[Category: Burley, S K]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Swaminathan, S]]		[[Category: Swaminathan, S]]
	[[Category: Zhang, Z]]		[[Category: Zhang, Z]]
-	[[Category: Isomerase]]
	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]		[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
	[[Category: PSI, Protein structure initiative]]		[[Category: PSI, Protein structure initiative]]
	[[Category: Sgxny]]		[[Category: Sgxny]]
	[[Category: Udp]]		[[Category: Udp]]

OCA at 13:57, 6 November 2014

OCA — Thu, 06 Nov 2014 13:57:04 GMT

←Older revision		Revision as of 13:57, 6 November 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3m2p\| PDB=3m2p \| SCENE= }}~~	+	==The crystal structure of UDP-N-acetylglucosamine 4-epimerase from Bacillus cereus==
-	===The crystal structure of UDP-N-acetylglucosamine 4-epimerase from Bacillus cereus===	+	<StructureSection load='3m2p' size='340' side='right' caption='[[3m2p]], [[Resolution\|resolution]] 2.95Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[3m2p]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M2P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3M2P FirstGlance]. <br>
-	[[3m2p]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M2P OCA].	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BC_5271 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1396 Bacillus cereus])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/UDP-N-acetylglucosamine_4-epimerase UDP-N-acetylglucosamine 4-epimerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.3.7 5.1.3.7] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3m2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m2p OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3m2p RCSB], [http://www.ebi.ac.uk/pdbsum/3m2p PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m2/3m2p_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Bacillus cereus]]		[[Category: Bacillus cereus]]
	[[Category: UDP-N-acetylglucosamine 4-epimerase]]		[[Category: UDP-N-acetylglucosamine 4-epimerase]]
-	[[Category: Burley, S K.]]	+	[[Category: Burley, S K]]
-	[[Category: ~~NYSGXRC, New York SGX Research Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Swaminathan, S.]]	+	[[Category: Swaminathan, S]]
-	[[Category: Zhang, Z~~.]]~~	+	[[Category: Zhang, Z]]
-	~~[[Category: 11155j~~]]	+
	[[Category: Isomerase]]		[[Category: Isomerase]]
-	[[Category: New ~~york sgx research center~~ for ~~structural genomic]]~~	+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
-	~~[[Category: Nysgxrc~~]]	+	[[Category: PSI, Protein structure initiative]]
-	[[Category: Protein structure initiative]]	+
-	~~[[Category: Psi-2~~]]	+
	[[Category: Sgxny]]		[[Category: Sgxny]]
-	[[Category: Structural genomic]]
	[[Category: Udp]]		[[Category: Udp]]

OCA: Protected "3m2p" [edit=sysop:move=sysop]

OCA — Wed, 10 Apr 2013 23:33:27 GMT

Protected "3m2p" [edit=sysop:move=sysop]

←Older revision

Revision as of 23:33, 10 April 2013

OCA at 23:33, 10 April 2013

OCA — Wed, 10 Apr 2013 23:33:24 GMT

←Older revision		Revision as of 23:33, 10 April 2013
Line 1:		Line 1:
-	{{Seed}}
-	[[Image:3m2p.jpg\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3m2p", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3m2p\| PDB=3m2p \| SCENE= }}		{{STRUCTURE_3m2p\| PDB=3m2p \| SCENE= }}
-
	===The crystal structure of UDP-N-acetylglucosamine 4-epimerase from Bacillus cereus===		===The crystal structure of UDP-N-acetylglucosamine 4-epimerase from Bacillus cereus===
-

	==About this Structure==		==About this Structure==
-	~~3M2P~~ is a 6 ~~chains~~ structure with ~~sequences~~ from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M2P OCA].	+	[[3m2p]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M2P OCA].
	[[Category: Bacillus cereus]]		[[Category: Bacillus cereus]]
	[[Category: UDP-N-acetylglucosamine 4-epimerase]]		[[Category: UDP-N-acetylglucosamine 4-epimerase]]
Line 30:		Line 19:
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Udp]]		[[Category: Udp]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 7 10:53:19 2010''

OCA at 07:53, 7 April 2010

OCA — Wed, 07 Apr 2010 07:53:20 GMT

←Older revision		Revision as of 07:53, 7 April 2010
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3m2p.jpg\|left\|200px]]

-	The ~~entry 3m2p~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3m2p", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3m2p\| PDB=3m2p \| SCENE= }}

-	~~Authors: Zhang, Z., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)~~	+	===The crystal structure of UDP-N-acetylglucosamine 4-epimerase from Bacillus cereus===

-	Description: The crystal structure of UDP-N-acetylglucosamine 4-epimerase from Bacillus cereus

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Mar 31 13~~:22:27 2010''	+	==About this Structure==
		+	3M2P is a 6 chains structure with sequences from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M2P OCA].
		+	[[Category: Bacillus cereus]]
		+	[[Category: UDP-N-acetylglucosamine 4-epimerase]]
		+	[[Category: Burley, S K.]]
		+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
		+	[[Category: Swaminathan, S.]]
		+	[[Category: Zhang, Z.]]
		+	[[Category: 11155j]]
		+	[[Category: Isomerase]]
		+	[[Category: New york sgx research center for structural genomic]]
		+	[[Category: Nysgxrc]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-2]]
		+	[[Category: Sgxny]]
		+	[[Category: Structural genomic]]
		+	[[Category: Udp]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 7 10:53:19 2010''

OCA at 10:22, 31 March 2010

OCA — Wed, 31 Mar 2010 10:22:27 GMT

←Older revision		Revision as of 10:22, 31 March 2010
Line 3:		Line 3:
	The entry 3m2p is ON HOLD		The entry 3m2p is ON HOLD

-	Authors: Zhang, Z., Burley, S. K, Swaminathan, S.	+	Authors: Zhang, Z., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)

	Description: The crystal structure of UDP-N-acetylglucosamine 4-epimerase from Bacillus cereus		Description: The crystal structure of UDP-N-acetylglucosamine 4-epimerase from Bacillus cereus

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar ~~17 09:~~13:04 2010''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 31 13:22:27 2010''

OCA: New page: '''Unreleased structure''' The entry 3m2p is ON HOLD Authors: Zhang, Z., Burley, S. K, Swaminathan, S. Description: The crystal structure of UDP-N-acetylglucosamine 4-epimerase from Ba...

OCA — Wed, 17 Mar 2010 07:13:05 GMT

New page: '''Unreleased structure''' The entry 3m2p is ON HOLD Authors: Zhang, Z., Burley, S. K, Swaminathan, S. Description: The crystal structure of UDP-N-acetylglucosamine 4-epimerase from Ba...

New page

'''Unreleased structure'''

The entry 3m2p is ON HOLD

Authors: Zhang, Z., Burley, S. K, Swaminathan, S.

Description: The crystal structure of UDP-N-acetylglucosamine 4-epimerase from Bacillus cereus

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 17 09:13:04 2010''