3m8n - Revision history

OCA at 07:42, 9 January 2019

OCA — Wed, 09 Jan 2019 07:42:31 GMT

←Older revision		Revision as of 07:42, 9 January 2019
Line 14:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m8/3m8n_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m8/3m8n_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 10:33, 11 August 2016

OCA — Thu, 11 Aug 2016 10:33:28 GMT

←Older revision		Revision as of 10:33, 11 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of a possible gutathione S-tranferase from Rhodopseudomonas palustris==		==Crystal structure of a possible gutathione S-tranferase from Rhodopseudomonas palustris==
	<StructureSection load='3m8n' size='340' side='right' caption='[[3m8n]], [[Resolution\|resolution]] 2.04Å' scene=''>		<StructureSection load='3m8n' size='340' side='right' caption='[[3m8n]], [[Resolution\|resolution]] 2.04Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3m8n]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Rhodopseudomonas_palustris Rhodopseudomonas~~ palustris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M8N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3M8N FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3m8n]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"rhodobacillus_palustris"_molisch_1907 "rhodobacillus palustris" molisch 1907]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M8N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3M8N FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">gstA1, RPA4332 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1076 ~~Rhodopseudomonas~~ palustris])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">gstA1, RPA4332 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1076 "Rhodobacillus palustris" Molisch 1907])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutathione_transferase Glutathione transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.18 2.5.1.18] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutathione_transferase Glutathione transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.18 2.5.1.18] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3m8n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m8n OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3m8n RCSB], [http://www.ebi.ac.uk/pdbsum/3m8n PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3m8n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m8n OCA], [http://pdbe.org/3m8n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3m8n RCSB], [http://www.ebi.ac.uk/pdbsum/3m8n PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3m8n ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 17:		Line 18:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3m8n ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Rhodobacillus palustris molisch 1907]]
	[[Category: Glutathione transferase]]		[[Category: Glutathione transferase]]
-	[[Category: Rhodopseudomonas palustris]]
	[[Category: Burley, S K]]		[[Category: Burley, S K]]
	[[Category: Damodharan, L]]		[[Category: Damodharan, L]]

OCA at 13:51, 6 November 2014

OCA — Thu, 06 Nov 2014 13:51:17 GMT

←Older revision		Revision as of 13:51, 6 November 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3m8n\| PDB=3m8n \| SCENE= }}~~	+	==Crystal structure of a possible gutathione S-tranferase from Rhodopseudomonas palustris==
-	===Crystal structure of a possible gutathione S-tranferase from Rhodopseudomonas palustris===	+	<StructureSection load='3m8n' size='340' side='right' caption='[[3m8n]], [[Resolution\|resolution]] 2.04Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[3m8n]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M8N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3M8N FirstGlance]. <br>
-	[[3m8n]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M8N OCA].	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">gstA1, RPA4332 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1076 Rhodopseudomonas palustris])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutathione_transferase Glutathione transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.18 2.5.1.18] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3m8n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m8n OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3m8n RCSB], [http://www.ebi.ac.uk/pdbsum/3m8n PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m8/3m8n_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Glutathione transferase]]		[[Category: Glutathione transferase]]
	[[Category: Rhodopseudomonas palustris]]		[[Category: Rhodopseudomonas palustris]]
-	[[Category: Burley, S K.]]	+	[[Category: Burley, S K]]
-	[[Category: Damodharan, L~~.]]~~	+	[[Category: Damodharan, L]]
-	~~[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]~~	+
-	~~[[Category: Swaminathan, S.]]~~	+
-	~~[[Category: New york sgx research center for structural genomic]]~~	+
-	~~[[Category: Nysgxrc]]~~	+
-	~~[[Category: Protein structure initiative]]~~	+
-	~~[[Category: Psi-ii~~]]	+
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
		+	[[Category: Swaminathan, S]]
		+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
		+	[[Category: PSI, Protein structure initiative]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA: Protected "3m8n" [edit=sysop:move=sysop]

OCA — Wed, 10 Apr 2013 23:26:23 GMT

Protected "3m8n" [edit=sysop:move=sysop]

←Older revision

Revision as of 23:26, 10 April 2013

OCA at 23:26, 10 April 2013

OCA — Wed, 10 Apr 2013 23:26:21 GMT

←Older revision		Revision as of 23:26, 10 April 2013
Line 1:		Line 1:
-	{{Seed}}
-	[[Image:3m8n.jpg\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3m8n", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3m8n\| PDB=3m8n \| SCENE= }}		{{STRUCTURE_3m8n\| PDB=3m8n \| SCENE= }}
-
	===Crystal structure of a possible gutathione S-tranferase from Rhodopseudomonas palustris===		===Crystal structure of a possible gutathione S-tranferase from Rhodopseudomonas palustris===
-

	==About this Structure==		==About this Structure==
-	~~3M8N~~ is a 4 ~~chains~~ structure with ~~sequences~~ from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M8N OCA].	+	[[3m8n]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M8N OCA].
	[[Category: Glutathione transferase]]		[[Category: Glutathione transferase]]
	[[Category: Rhodopseudomonas palustris]]		[[Category: Rhodopseudomonas palustris]]
Line 27:		Line 16:
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 7 10:54:44 2010''

OCA at 07:54, 7 April 2010

OCA — Wed, 07 Apr 2010 07:54:45 GMT

←Older revision		Revision as of 07:54, 7 April 2010
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3m8n.jpg\|left\|200px]]

-	The ~~entry 3m8n~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3m8n", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3m8n\| PDB=3m8n \| SCENE= }}

-	~~Authors: Damodharan, L, Burley,~~ S~~.K. , Swaminathan, S., New York Structural GenomiX Research Consortium (NYSGXRC)~~	+	===Crystal structure of a possible gutathione S-tranferase from Rhodopseudomonas palustris===

-	Description: Crystal structure of a possible gutathione S-tranferase from Rhodopseudomonas palustris

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Mar 31 13~~:23:11 2010''	+	==About this Structure==
		+	3M8N is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M8N OCA].
		+	[[Category: Glutathione transferase]]
		+	[[Category: Rhodopseudomonas palustris]]
		+	[[Category: Burley, S K.]]
		+	[[Category: Damodharan, L.]]
		+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
		+	[[Category: Swaminathan, S.]]
		+	[[Category: New york sgx research center for structural genomic]]
		+	[[Category: Nysgxrc]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-ii]]
		+	[[Category: Structural genomic]]
		+	[[Category: Transferase]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 7 10:54:44 2010''

OCA at 10:23, 31 March 2010

OCA — Wed, 31 Mar 2010 10:23:11 GMT

←Older revision		Revision as of 10:23, 31 March 2010
Line 3:		Line 3:
	The entry 3m8n is ON HOLD		The entry 3m8n is ON HOLD

-	Authors: Damodharan, L, Burley, S.K. , Swaminathan, S.	+	Authors: Damodharan, L, Burley, S.K. , Swaminathan, S., New York Structural GenomiX Research Consortium (NYSGXRC)

	Description: Crystal structure of a possible gutathione S-tranferase from Rhodopseudomonas palustris		Description: Crystal structure of a possible gutathione S-tranferase from Rhodopseudomonas palustris

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar ~~24 08~~:39:46 2010''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 31 13:23:11 2010''

OCA: New page: '''Unreleased structure''' The entry 3m8n is ON HOLD Authors: Damodharan, L, Burley, S.K. , Swaminathan, S. Description: Crystal structure of a possible gutathione S-tranferase from Rh...

OCA — Wed, 24 Mar 2010 06:39:46 GMT

New page: '''Unreleased structure''' The entry 3m8n is ON HOLD Authors: Damodharan, L, Burley, S.K. , Swaminathan, S. Description: Crystal structure of a possible gutathione S-tranferase from Rh...

New page

'''Unreleased structure'''

The entry 3m8n is ON HOLD

Authors: Damodharan, L, Burley, S.K. , Swaminathan, S.

Description: Crystal structure of a possible gutathione S-tranferase from Rhodopseudomonas palustris

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 24 08:39:46 2010''