3mkq - Revision history

OCA at 10:25, 21 February 2024

OCA — Wed, 21 Feb 2024 10:25:33 GMT

←Older revision		Revision as of 10:25, 21 February 2024
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	==Crystal structure of yeast alpha/betaprime-COP subcomplex of the COPI vesicular coat==		==Crystal structure of yeast alpha/betaprime-COP subcomplex of the COPI vesicular coat==
-	<StructureSection load='3mkq' size='340' side='right' caption='[[3mkq]], [[Resolution\|resolution]] 2.50Å' scene=''>	+	<StructureSection load='3mkq' size='340' side='right'caption='[[3mkq]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3mkq]] is a 6 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Atcc_18824 Atcc 18824~~] and [~~http~~://en.wikipedia.org/wiki/~~Baker's_yeast Baker's yeast~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MKQ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3MKQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3mkq]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae] and [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_YJM789 Saccharomyces cerevisiae YJM789]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MKQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MKQ FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~>[[3mkr\|3mkr]]</td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.5Å</td></tr>
-	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">SEC27, SCY_1929 ([http://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=~~5&~~id=307796 Baker's yeast]), RET1, COP1, SEC33, YDL145C, D1578 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mkq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mkq OCA], [https://pdbe.org/3mkq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mkq RCSB], [https://www.ebi.ac.uk/pdbsum/3mkq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mkq ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3mkq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mkq OCA], [~~http~~://pdbe.org/3mkq PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3mkq RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3mkq PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3mkq ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/~~COPA_YEAST COPA_YEAST~~]] The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.<ref>PMID:17101773</ref>	+	[https://www.uniprot.org/uniprot/A6ZU46_YEAS7 A6ZU46_YEAS7]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mkq ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mkq ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
-	<div style="background-color:#fffaf0;">
-	== Publication Abstract from PubMed ==
-	COPI-coated vesicles form at the Golgi apparatus from two cytosolic components, ARF G protein and coatomer, a heptameric complex that can polymerize into a cage to deform the membrane into a bud. Although coatomer shares a common evolutionary origin with COPII and clathrin vesicle coat proteins, the architectural relationship among the three cages is unclear. Strikingly, the alphabeta'-COP core of coatomer crystallizes as a triskelion in which three copies of a beta'-COP beta-propeller domain converge through their axial ends. We infer that the trimer constitutes the vertex of the COPI cage. Our model proposes that the COPI cage is intermediate in design between COPII and clathrin: COPI shares with clathrin an arrangement of three curved alpha-solenoid legs radiating from a common center, and COPI shares with COPII highly similar vertex interactions involving the axial ends of beta-propeller domains.
-
-	Structure of coatomer cage proteins and the relationship among COPI, COPII, and clathrin vesicle coats.,Lee C, Goldberg J Cell. 2010 Jul 9;142(1):123-32. Epub 2010 Jun 24. PMID:20579721<ref>PMID:20579721</ref>
-
-	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	</div>
-	<div class="pdbe-citations 3mkq" style="background-color:#fffaf0;"></div>
-	== References ==
-	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Atcc 18824~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Baker's yeast~~]]	+	[[Category: Saccharomyces cerevisiae]]
-	[[Category: ~~Goldberg, J~~]]	+	[[Category: Saccharomyces cerevisiae YJM789]]
-	[[Category: ~~Lee, C~~]]	+	[[Category: Goldberg J]]
-	[[Category: ~~Alpha-solenoid]]~~	+	[[Category: Lee C]]
-	~~[[Category: Beta-propeller]]~~	+
-	~~[[Category: Transport protein~~]]	+

OCA at 13:40, 16 January 2019

OCA — Wed, 16 Jan 2019 13:40:44 GMT

←Older revision		Revision as of 13:40, 16 January 2019
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mk/3mkq_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mk/3mkq_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 16:42, 5 August 2016

OCA — Fri, 05 Aug 2016 16:42:52 GMT

←Older revision		Revision as of 16:42, 5 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of yeast alpha/betaprime-COP subcomplex of the COPI vesicular coat==		==Crystal structure of yeast alpha/betaprime-COP subcomplex of the COPI vesicular coat==
	<StructureSection load='3mkq' size='340' side='right' caption='[[3mkq]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='3mkq' size='340' side='right' caption='[[3mkq]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3mkq]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Saccharomyces_cerevisiae Saccharomyces cerevisiae~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MKQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MKQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3mkq]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824] and [http://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MKQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MKQ FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3mkr\|3mkr]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3mkr\|3mkr]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">SEC27, SCY_1929 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~4932 Saccharomyces cerevisiae~~]), RET1, COP1, SEC33, YDL145C, D1578 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ~~Saccharomyces cerevisiae~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">SEC27, SCY_1929 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=307796 Baker's yeast]), RET1, COP1, SEC33, YDL145C, D1578 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mkq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mkq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3mkq RCSB], [http://www.ebi.ac.uk/pdbsum/3mkq PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mkq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mkq OCA], [http://pdbe.org/3mkq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3mkq RCSB], [http://www.ebi.ac.uk/pdbsum/3mkq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3mkq ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 18:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mkq ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 27:		Line 28:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3mkq" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Saccharomyces cerevisiae~~]]	+	[[Category: Atcc 18824]]
		+	[[Category: Baker's yeast]]
	[[Category: Goldberg, J]]		[[Category: Goldberg, J]]
	[[Category: Lee, C]]		[[Category: Lee, C]]

OCA at 04:06, 25 December 2014

OCA — Thu, 25 Dec 2014 04:06:08 GMT

←Older revision		Revision as of 04:06, 25 December 2014
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	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mkq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mkq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3mkq RCSB], [http://www.ebi.ac.uk/pdbsum/3mkq PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mkq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mkq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3mkq RCSB], [http://www.ebi.ac.uk/pdbsum/3mkq PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/COPA_YEAST COPA_YEAST]] The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.<ref>PMID:17101773</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 17:15, 18 December 2014

OCA — Thu, 18 Dec 2014 17:15:43 GMT

←Older revision		Revision as of 17:15, 18 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3mkq\| PDB=3mkq \| SCENE= }}~~	+	==Crystal structure of yeast alpha/betaprime-COP subcomplex of the COPI vesicular coat==
-	===Crystal structure of yeast alpha/betaprime-COP subcomplex of the COPI vesicular coat===	+	<StructureSection load='3mkq' size='340' side='right' caption='[[3mkq]], [[Resolution\|resolution]] 2.50Å' scene=''>
-	~~{{ABSTRACT_PUBMED_20579721}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3mkq]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MKQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MKQ FirstGlance]. <br>
		+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3mkr\|3mkr]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">SEC27, SCY_1929 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae]), RET1, COP1, SEC33, YDL145C, D1578 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mkq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mkq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3mkq RCSB], [http://www.ebi.ac.uk/pdbsum/3mkq PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mk/3mkq_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	COPI-coated vesicles form at the Golgi apparatus from two cytosolic components, ARF G protein and coatomer, a heptameric complex that can polymerize into a cage to deform the membrane into a bud. Although coatomer shares a common evolutionary origin with COPII and clathrin vesicle coat proteins, the architectural relationship among the three cages is unclear. Strikingly, the alphabeta'-COP core of coatomer crystallizes as a triskelion in which three copies of a beta'-COP beta-propeller domain converge through their axial ends. We infer that the trimer constitutes the vertex of the COPI cage. Our model proposes that the COPI cage is intermediate in design between COPII and clathrin: COPI shares with clathrin an arrangement of three curved alpha-solenoid legs radiating from a common center, and COPI shares with COPII highly similar vertex interactions involving the axial ends of beta-propeller domains.

-	~~==Function==~~	+	Structure of coatomer cage proteins and the relationship among COPI, COPII, and clathrin vesicle coats.,Lee C, Goldberg J Cell. 2010 Jul 9;142(1):123-32. Epub 2010 Jun 24. PMID:20579721<ref>PMID:20579721</ref>
-	~~[[http://www.uniprot.org/uniprot/COPA_YEAST COPA_YEAST]] The~~ coatomer ~~is a cytosolic protein complex that binds to dilysine motifs~~ and ~~reversibly associates with Golgi non-~~clathrin~~-coated vesicles~~, ~~which further mediate biosynthetic protein transport from the ER~~, ~~via the Golgi up to the trans Golgi network~~. ~~Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi~~-~~to-ER transport of dilysine-tagged proteins~~.<ref>PMID:~~17101773~~</ref>	+

-	~~==About this Structure==~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~[[3mkq]] is~~ a ~~6 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3MKQ OCA].~~	+	</div>
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	~~<ref group="xtra">PMID:020579721</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Saccharomyces cerevisiae]]		[[Category: Saccharomyces cerevisiae]]
-	[[Category: Goldberg, J.]]	+	[[Category: Goldberg, J]]
-	[[Category: Lee, C.]]	+	[[Category: Lee, C]]
	[[Category: Alpha-solenoid]]		[[Category: Alpha-solenoid]]
	[[Category: Beta-propeller]]		[[Category: Beta-propeller]]
	[[Category: Transport protein]]		[[Category: Transport protein]]

OCA: Protected "3mkq" [edit=sysop:move=sysop]

OCA — Wed, 17 Apr 2013 21:08:06 GMT

Protected "3mkq" [edit=sysop:move=sysop]

←Older revision

Revision as of 21:08, 17 April 2013

OCA at 21:08, 17 April 2013

OCA — Wed, 17 Apr 2013 21:08:05 GMT

←Older revision		Revision as of 21:08, 17 April 2013
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-	{{Seed}}
-	[[Image:3mkq.png\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3mkq", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3mkq\| PDB=3mkq \| SCENE= }}		{{STRUCTURE_3mkq\| PDB=3mkq \| SCENE= }}
-
	===Crystal structure of yeast alpha/betaprime-COP subcomplex of the COPI vesicular coat===		===Crystal structure of yeast alpha/betaprime-COP subcomplex of the COPI vesicular coat===
		+	{{ABSTRACT_PUBMED_20579721}}

-		+	==Function==
-	<!--	+	[[http://www.uniprot.org/uniprot/COPA_YEAST COPA_YEAST]] The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.<ref>PMID:17101773</ref>
-	~~The line below this paragraph~~, ~~{{ABSTRACT_PUBMED_20579721}}~~, ~~adds~~ the ~~Publication Abstract~~ to the ~~page~~	+
-	~~(as it appears on PubMed at http://www~~.~~pubmed.gov)~~, ~~where 20579721~~ is the ~~PubMed ID number.~~	+
-	-->	+
-	~~{{ABSTRACT_PUBMED_20579721}}~~	+

	==About this Structure==		==About this Structure==
-	~~3MKQ~~ is a 6 ~~chains~~ structure with ~~sequences~~ from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae~~] and [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_yjm789 Saccharomyces cerevisiae yjm789~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MKQ OCA].	+	[[3mkq]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MKQ OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~20579721~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:020579721</ref><references group="xtra"/><references/>
	[[Category: Saccharomyces cerevisiae]]		[[Category: Saccharomyces cerevisiae]]
-	[[Category: Saccharomyces cerevisiae yjm789]]
	[[Category: Goldberg, J.]]		[[Category: Goldberg, J.]]
	[[Category: Lee, C.]]		[[Category: Lee, C.]]
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	[[Category: Beta-propeller]]		[[Category: Beta-propeller]]
	[[Category: Transport protein]]		[[Category: Transport protein]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 21 09:56:13 2010''

OCA at 05:49, 21 July 2010

OCA — Wed, 21 Jul 2010 05:49:48 GMT

←Older revision		Revision as of 05:49, 21 July 2010
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	{{Seed}}		{{Seed}}
-	[[Image:3mkq.~~jpg~~\|left\|200px]]	+	[[Image:3mkq.png\|left\|200px]]

	<!--		<!--
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	[[Category: Transport protein]]		[[Category: Transport protein]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul ~~14 16:~~21:00 2010''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 21 09:56:13 2010''

OCA at 12:14, 14 July 2010

OCA — Wed, 14 Jul 2010 12:14:53 GMT

←Older revision		Revision as of 12:14, 14 July 2010
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-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3mkq.jpg\|left\|200px]]

-	The ~~entry 3mkq~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3mkq", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3mkq\| PDB=3mkq \| SCENE= }}

-	~~Authors: Lee, C., Goldberg, J.~~	+	===Crystal structure of yeast alpha/betaprime-COP subcomplex of the COPI vesicular coat===

-	Description: Crystal structure of yeast alpha/betaprime-COP subcomplex of the COPI vesicular coat

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Jun 23 08~~:41:50 2010''	+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_20579721}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 20579721 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_20579721}}
		+
		+	==About this Structure==
		+	3MKQ is a 6 chains structure with sequences from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae] and [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_yjm789 Saccharomyces cerevisiae yjm789]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MKQ OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:20579721</ref><references group="xtra"/>
		+	[[Category: Saccharomyces cerevisiae]]
		+	[[Category: Saccharomyces cerevisiae yjm789]]
		+	[[Category: Goldberg, J.]]
		+	[[Category: Lee, C.]]
		+	[[Category: Alpha-solenoid]]
		+	[[Category: Beta-propeller]]
		+	[[Category: Transport protein]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 14 16:21:00 2010''

OCA at 04:36, 23 June 2010

OCA — Wed, 23 Jun 2010 04:36:31 GMT

←Older revision		Revision as of 04:36, 23 June 2010
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3mkq is ON HOLD	+	The entry 3mkq is ON HOLD until Paper Publication

	Authors: Lee, C., Goldberg, J.		Authors: Lee, C., Goldberg, J.
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	Description: Crystal structure of yeast alpha/betaprime-COP subcomplex of the COPI vesicular coat		Description: Crystal structure of yeast alpha/betaprime-COP subcomplex of the COPI vesicular coat

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~May 5 11~~:39:58 2010''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 23 08:41:50 2010''