3mxt - Revision history

OCA at 13:31, 16 January 2019

OCA — Wed, 16 Jan 2019 13:31:04 GMT

←Older revision		Revision as of 13:31, 16 January 2019
Line 16:		Line 16:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mx/3mxt_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mx/3mxt_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 30:		Line 30:
	[[Category: Pantoate--beta-alanine ligase]]		[[Category: Pantoate--beta-alanine ligase]]
	[[Category: Anderson, W F]]		[[Category: Anderson, W F]]
		+	[[Category: Structural genomic]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak, A]]
	[[Category: Kim, Y]]		[[Category: Kim, Y]]
Line 35:		Line 36:
	[[Category: Zhou, M]]		[[Category: Zhou, M]]
	[[Category: Alpha-beta-alpha]]		[[Category: Alpha-beta-alpha]]
-	[[Category: Structural genomic]]
	[[Category: Csgid]]		[[Category: Csgid]]
	[[Category: Ligase]]		[[Category: Ligase]]

OCA at 19:05, 5 August 2016

OCA — Fri, 05 Aug 2016 19:05:46 GMT

←Older revision		Revision as of 19:05, 5 August 2016
Line 1:		Line 1:
		+
	==Crystal Structure of Pantoate-Beta-alanine Ligase from Campylobacter jejuni==		==Crystal Structure of Pantoate-Beta-alanine Ligase from Campylobacter jejuni==
	<StructureSection load='3mxt' size='340' side='right' caption='[[3mxt]], [[Resolution\|resolution]] 1.85Å' scene=''>		<StructureSection load='3mxt' size='340' side='right' caption='[[3mxt]], [[Resolution\|resolution]] 1.85Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3mxt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Campylobacter_jejuni_subsp._jejuni Campylobacter jejuni subsp. jejuni~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MXT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MXT FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3mxt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Camje Camje]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MXT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MXT FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Cj0297c, panC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~32022 Campylobacter jejuni subsp. jejuni~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Cj0297c, panC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=192222 CAMJE])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pantoate--beta-alanine_ligase Pantoate--beta-alanine ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.2.1 6.3.2.1] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pantoate--beta-alanine_ligase Pantoate--beta-alanine ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.2.1 6.3.2.1] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mxt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mxt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3mxt RCSB], [http://www.ebi.ac.uk/pdbsum/3mxt PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mxt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mxt OCA], [http://pdbe.org/3mxt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3mxt RCSB], [http://www.ebi.ac.uk/pdbsum/3mxt PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3mxt ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 19:		Line 20:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mxt ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

Line 26:		Line 27:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Campylobacter jejuni subsp. jejuni~~]]	+	[[Category: Camje]]
	[[Category: Pantoate--beta-alanine ligase]]		[[Category: Pantoate--beta-alanine ligase]]
	[[Category: Anderson, W F]]		[[Category: Anderson, W F]]

OCA at 05:04, 25 December 2014

OCA — Thu, 25 Dec 2014 05:04:14 GMT

←Older revision		Revision as of 05:04, 25 December 2014
Line 9:		Line 9:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mxt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mxt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3mxt RCSB], [http://www.ebi.ac.uk/pdbsum/3mxt PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mxt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mxt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3mxt RCSB], [http://www.ebi.ac.uk/pdbsum/3mxt PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/PANC_CAMJE PANC_CAMJE]] Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 15:25, 18 December 2014

OCA — Thu, 18 Dec 2014 15:25:42 GMT

←Older revision		Revision as of 15:25, 18 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3mxt\| PDB=3mxt \| SCENE= }}~~	+	==Crystal Structure of Pantoate-Beta-alanine Ligase from Campylobacter jejuni==
-	===Crystal Structure of Pantoate-Beta-alanine Ligase from Campylobacter jejuni===	+	<StructureSection load='3mxt' size='340' side='right' caption='[[3mxt]], [[Resolution\|resolution]] 1.85Å' scene=''>
-		+	== Structural highlights ==
-	==~~Function~~==	+	<table><tr><td colspan='2'>[[3mxt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni_subsp._jejuni Campylobacter jejuni subsp. jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MXT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MXT FirstGlance]. <br>
-	[[~~http://www.uniprot.org/uniprot/PANC_CAMJE PANC_CAMJE~~]] ~~Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate (By similarity)~~.	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	==~~About this Structure~~==	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Cj0297c, panC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=32022 Campylobacter jejuni subsp. jejuni])</td></tr>
-	[[3mxt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni_subsp._jejuni Campylobacter jejuni subsp. jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MXT OCA].	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pantoate--beta-alanine_ligase Pantoate--beta-alanine ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.2.1 6.3.2.1] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mxt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mxt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3mxt RCSB], [http://www.ebi.ac.uk/pdbsum/3mxt PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mx/3mxt_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>

	==See Also==		==See Also==
	*[[Pantothenate synthetase\|Pantothenate synthetase]]		*[[Pantothenate synthetase\|Pantothenate synthetase]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Campylobacter jejuni subsp. jejuni]]		[[Category: Campylobacter jejuni subsp. jejuni]]
	[[Category: Pantoate--beta-alanine ligase]]		[[Category: Pantoate--beta-alanine ligase]]
-	[[Category: Anderson, W F.]]	+	[[Category: Anderson, W F]]
-	[[Category: Joachimiak, A.]]	+	[[Category: Joachimiak, A]]
-	[[Category: Kim, Y.]]	+	[[Category: Kim, Y]]
-	[[Category: Papazisi, L.]]	+	[[Category: Papazisi, L]]
-	[[Category: Zhou, M.]]	+	[[Category: Zhou, M]]
	[[Category: Alpha-beta-alpha]]		[[Category: Alpha-beta-alpha]]
-	[[Category: ~~Center for structural genomics of infectious disease~~]]	+	[[Category: Structural genomic]]
	[[Category: Csgid]]		[[Category: Csgid]]
	[[Category: Ligase]]		[[Category: Ligase]]
-	[[Category: Structural genomic]]

OCA: Protected "3mxt" [edit=sysop:move=sysop]

OCA — Wed, 17 Apr 2013 20:55:55 GMT

Protected "3mxt" [edit=sysop:move=sysop]

←Older revision

Revision as of 20:55, 17 April 2013

OCA at 20:55, 17 April 2013

OCA — Wed, 17 Apr 2013 20:55:52 GMT

←Older revision		Revision as of 20:55, 17 April 2013
Line 1:		Line 1:
-	{{Seed}}
-	[[Image:3mxt.jpg\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3mxt", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3mxt\| PDB=3mxt \| SCENE= }}		{{STRUCTURE_3mxt\| PDB=3mxt \| SCENE= }}
-
	===Crystal Structure of Pantoate-Beta-alanine Ligase from Campylobacter jejuni===		===Crystal Structure of Pantoate-Beta-alanine Ligase from Campylobacter jejuni===

		+	==Function==
		+	[[http://www.uniprot.org/uniprot/PANC_CAMJE PANC_CAMJE]] Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate (By similarity).

	==About this Structure==		==About this Structure==
-	~~3MXT~~ is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni_subsp._jejuni Campylobacter jejuni subsp. jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MXT OCA].	+	[[3mxt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni_subsp._jejuni Campylobacter jejuni subsp. jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MXT OCA].
		+
		+	==See Also==
		+	*[[Pantothenate synthetase\|Pantothenate synthetase]]
	[[Category: Campylobacter jejuni subsp. jejuni]]		[[Category: Campylobacter jejuni subsp. jejuni]]
	[[Category: Pantoate--beta-alanine ligase]]		[[Category: Pantoate--beta-alanine ligase]]
Line 27:		Line 22:
	[[Category: Ligase]]		[[Category: Ligase]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 16 08:43:28 2010''

OCA at 04:38, 16 June 2010

OCA — Wed, 16 Jun 2010 04:38:28 GMT

←Older revision		Revision as of 04:38, 16 June 2010
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3mxt.jpg\|left\|200px]]

-	The ~~entry 3mxt~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3mxt", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3mxt\| PDB=3mxt \| SCENE= }}

-	~~Authors: Kim, Y., Zhou, M., Papazisi, L., Anderson, W.F., Joachimiak, A.~~	+	===Crystal Structure of Pantoate-Beta-alanine Ligase from Campylobacter jejuni===

-	Description: Crystal Structure of Pantoate-Beta-alanine Ligase from Campylobacter jejuni

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Thu May 20 09~~:19:20 2010''	+	==About this Structure==
		+	3MXT is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni_subsp._jejuni Campylobacter jejuni subsp. jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MXT OCA].
		+	[[Category: Campylobacter jejuni subsp. jejuni]]
		+	[[Category: Pantoate--beta-alanine ligase]]
		+	[[Category: Anderson, W F.]]
		+	[[Category: Joachimiak, A.]]
		+	[[Category: Kim, Y.]]
		+	[[Category: Papazisi, L.]]
		+	[[Category: Zhou, M.]]
		+	[[Category: Alpha-beta-alpha]]
		+	[[Category: Center for structural genomics of infectious disease]]
		+	[[Category: Csgid]]
		+	[[Category: Ligase]]
		+	[[Category: Structural genomic]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 16 08:43:28 2010''

OCA: New page: '''Unreleased structure''' The entry 3mxt is ON HOLD Authors: Kim, Y., Zhou, M., Papazisi, L., Anderson, W.F., Joachimiak, A. Description: Crystal Structure of Pantoate-Beta-alanine Li...

OCA — Thu, 20 May 2010 06:19:21 GMT

New page: '''Unreleased structure''' The entry 3mxt is ON HOLD Authors: Kim, Y., Zhou, M., Papazisi, L., Anderson, W.F., Joachimiak, A. Description: Crystal Structure of Pantoate-Beta-alanine Li...

New page

'''Unreleased structure'''

The entry 3mxt is ON HOLD

Authors: Kim, Y., Zhou, M., Papazisi, L., Anderson, W.F., Joachimiak, A.

Description: Crystal Structure of Pantoate-Beta-alanine Ligase from Campylobacter jejuni

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu May 20 09:19:20 2010''