3o6r - Revision history

OCA at 10:32, 21 February 2024

OCA — Wed, 21 Feb 2024 10:32:51 GMT

←Older revision		Revision as of 10:32, 21 February 2024
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3o6r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_opacus Rhodococcus opacus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O6R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3O6R FirstGlance]. <br>		<table><tr><td colspan='2'>[[3o6r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_opacus Rhodococcus opacus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O6R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3O6R FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MYY:(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL+PALMITATE'>MYY</scene>, <scene name='pdbligand=PYG:BENZENE-1,2,3-TRIOL'>PYG</scene~~></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.6Å</td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3o32\|3o32]], [[3o5u\|3o5u]], [[3o6j\|3o6j]]</div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MYY:(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL+PALMITATE'>MYY</scene>, <scene name='pdbligand=PYG:BENZENE-1,2,3-TRIOL'>PYG</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3o6r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o6r OCA], [https://pdbe.org/3o6r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3o6r RCSB], [https://www.ebi.ac.uk/pdbsum/3o6r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3o6r ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3o6r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o6r OCA], [https://pdbe.org/3o6r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3o6r RCSB], [https://www.ebi.ac.uk/pdbsum/3o6r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3o6r ProSAT]</span></td></tr>
	</table>		</table>
-	~~<div style~~=~~"background-color:#fffaf0;">~~	+	== Function ==
-	=~~= Publication Abstract from PubMed~~ ==	+	[https://www.uniprot.org/uniprot/CLCA_RHOOP CLCA_RHOOP]
-	The crystallographic structures of 4-chlorocatechol 1,2-dioxygenase (4-CCD) complexes with 3,5-dichlorocatechol, protocatechuate (3,4-dihydroxybenzoate), hydroxyquinol (benzen-1,2,4-triol) and pyrogallol (benzen-1,2,3-triol), which act as substrates or inhibitors of the enzyme, have been determined and analyzed. 4-CCD from the Gram-positive bacterium Rhodococcus opacus 1CP is a Fe(III) ion containing enzyme specialized in the aerobic biodegradation of chlorocatechols. The structures of the 4-CCD complexes show that the catechols bind the catalytic iron ion in a bidentate mode displacing Tyr169 and the benzoate ion (found in the native enzyme structure) from the metal coordination sphere, as found in other adducts of intradiol dioxygenases with substrates. The analysis of the present structures allowed to identify the residues selectively involved in recognition of the diverse substrates. Furthermore the structural comparison with the corresponding complexes of catechol 1,2-dioxygenase from the same Rhodococcus strain (Rho-1,2-CTD) highlights significant differences in the binding of the tested catechols to the active site of the enzyme, particularly in the orientation of the aromatic ring substituents. As an example the 3-substituted catechols are bound with the substituent oriented towards the external part of the 4-CCD active site cavity, whereas in the Rho-1,2-CTD complexes the 3-substituents were placed in the internal position. The present crystallographic study shed light on the mechanism that allows substrate recognition inside this class of high specific enzymes involved in the biodegradation of recalcitrant pollutants.	+
-		+
-	~~X-ray structures of 4-chlorocatechol 1,2-dioxygenase adducts with substituted catechols~~: new perspectives in the molecular basis of intradiol ring cleaving dioxygenases specificity.,Ferraroni M, Kolomytseva M, Scozzafava A, Golovleva L, Briganti F J Struct Biol. 2013 Mar;181(3):274-82. doi: 10.1016/~~j.jsb.2012.11.007. Epub 2012 , Dec 20. PMID:23261399<ref>PMID:23261399<~~/~~ref>~~	+
-		+
-	~~From MEDLINE®/PubMed®, a database of the U~~.S. ~~National Library of Medicine.<br>~~	+
-	</~~div>~~	+
-	~~<div class="pdbe-citations 3o6r" style="background-color:#fffaf0;"><~~/~~div>~~	+

	==See Also==		==See Also==
	*[[Dioxygenase 3D structures\|Dioxygenase 3D structures]]		*[[Dioxygenase 3D structures\|Dioxygenase 3D structures]]
-	== References ==
-	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Rhodococcus opacus]]		[[Category: Rhodococcus opacus]]
-	[[Category: Briganti, F]]	+	[[Category: Briganti F]]
-	[[Category: Ferraroni, M]]	+	[[Category: Ferraroni M]]
-	[[Category: Golovleva, L]]	+	[[Category: Golovleva L]]
-	[[Category: Kolomitseva, M]]	+	[[Category: Kolomitseva M]]
-	~~[[Category: Beta barrel]]~~	+
-	~~[[Category: Oxidoreductase~~]]	+

OCA at 05:28, 10 August 2022

OCA — Wed, 10 Aug 2022 05:28:24 GMT

←Older revision		Revision as of 05:28, 10 August 2022
Line 3:		Line 3:
	<StructureSection load='3o6r' size='340' side='right'caption='[[3o6r]], [[Resolution\|resolution]] 2.60Å' scene=''>		<StructureSection load='3o6r' size='340' side='right'caption='[[3o6r]], [[Resolution\|resolution]] 2.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3o6r]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Rhodococcus_opacus Rhodococcus opacus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O6R OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=3O6R FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3o6r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_opacus Rhodococcus opacus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O6R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3O6R FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MYY:(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL+PALMITATE'>MYY</scene>, <scene name='pdbligand=PYG:BENZENE-1,2,3-TRIOL'>PYG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MYY:(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL+PALMITATE'>MYY</scene>, <scene name='pdbligand=PYG:BENZENE-1,2,3-TRIOL'>PYG</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3o32\|3o32]], [[3o5u\|3o5u]], [[3o6j\|3o6j]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3o32\|3o32]], [[3o5u\|3o5u]], [[3o6j\|3o6j]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=3o6r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o6r OCA], [~~http~~://pdbe.org/3o6r PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3o6r RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3o6r PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3o6r ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3o6r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o6r OCA], [https://pdbe.org/3o6r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3o6r RCSB], [https://www.ebi.ac.uk/pdbsum/3o6r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3o6r ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 08:10, 4 November 2020

OCA — Wed, 04 Nov 2020 08:10:32 GMT

←Older revision		Revision as of 08:10, 4 November 2020
Line 1:		Line 1:

	==Crystal Structure of 4-Chlorocatechol Dioxygenase from Rhodococcus opacus 1CP in complex with pyrogallol==		==Crystal Structure of 4-Chlorocatechol Dioxygenase from Rhodococcus opacus 1CP in complex with pyrogallol==
-	<StructureSection load='3o6r' size='340' side='right' caption='[[3o6r]], [[Resolution\|resolution]] 2.60Å' scene=''>	+	<StructureSection load='3o6r' size='340' side='right'caption='[[3o6r]], [[Resolution\|resolution]] 2.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3o6r]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodococcus_opacus Rhodococcus opacus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O6R OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3O6R FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3o6r]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodococcus_opacus Rhodococcus opacus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O6R OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3O6R FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MYY:(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL+PALMITATE'>MYY</scene>, <scene name='pdbligand=PYG:BENZENE-1,2,3-TRIOL'>PYG</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MYY:(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL+PALMITATE'>MYY</scene>, <scene name='pdbligand=PYG:BENZENE-1,2,3-TRIOL'>PYG</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3o32\|3o32]], [[3o5u\|3o5u]], [[3o6j\|3o6j]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3o32\|3o32]], [[3o5u\|3o5u]], [[3o6j\|3o6j]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3o6r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o6r OCA], [http://pdbe.org/3o6r PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3o6r RCSB], [http://www.ebi.ac.uk/pdbsum/3o6r PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3o6r ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3o6r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o6r OCA], [http://pdbe.org/3o6r PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3o6r RCSB], [http://www.ebi.ac.uk/pdbsum/3o6r PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3o6r ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 19:		Line 19:

	==See Also==		==See Also==
-	*[[Dioxygenase\|Dioxygenase]]	+	*[[Dioxygenase 3D structures\|Dioxygenase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Rhodococcus opacus]]		[[Category: Rhodococcus opacus]]
	[[Category: Briganti, F]]		[[Category: Briganti, F]]

OCA at 06:16, 19 April 2017

OCA — Wed, 19 Apr 2017 06:16:13 GMT

←Older revision		Revision as of 06:16, 19 April 2017
Line 8:		Line 8:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3o6r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o6r OCA], [http://pdbe.org/3o6r PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3o6r RCSB], [http://www.ebi.ac.uk/pdbsum/3o6r PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3o6r ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3o6r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o6r OCA], [http://pdbe.org/3o6r PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3o6r RCSB], [http://www.ebi.ac.uk/pdbsum/3o6r PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3o6r ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The crystallographic structures of 4-chlorocatechol 1,2-dioxygenase (4-CCD) complexes with 3,5-dichlorocatechol, protocatechuate (3,4-dihydroxybenzoate), hydroxyquinol (benzen-1,2,4-triol) and pyrogallol (benzen-1,2,3-triol), which act as substrates or inhibitors of the enzyme, have been determined and analyzed. 4-CCD from the Gram-positive bacterium Rhodococcus opacus 1CP is a Fe(III) ion containing enzyme specialized in the aerobic biodegradation of chlorocatechols. The structures of the 4-CCD complexes show that the catechols bind the catalytic iron ion in a bidentate mode displacing Tyr169 and the benzoate ion (found in the native enzyme structure) from the metal coordination sphere, as found in other adducts of intradiol dioxygenases with substrates. The analysis of the present structures allowed to identify the residues selectively involved in recognition of the diverse substrates. Furthermore the structural comparison with the corresponding complexes of catechol 1,2-dioxygenase from the same Rhodococcus strain (Rho-1,2-CTD) highlights significant differences in the binding of the tested catechols to the active site of the enzyme, particularly in the orientation of the aromatic ring substituents. As an example the 3-substituted catechols are bound with the substituent oriented towards the external part of the 4-CCD active site cavity, whereas in the Rho-1,2-CTD complexes the 3-substituents were placed in the internal position. The present crystallographic study shed light on the mechanism that allows substrate recognition inside this class of high specific enzymes involved in the biodegradation of recalcitrant pollutants.
		+
		+	X-ray structures of 4-chlorocatechol 1,2-dioxygenase adducts with substituted catechols: new perspectives in the molecular basis of intradiol ring cleaving dioxygenases specificity.,Ferraroni M, Kolomytseva M, Scozzafava A, Golovleva L, Briganti F J Struct Biol. 2013 Mar;181(3):274-82. doi: 10.1016/j.jsb.2012.11.007. Epub 2012 , Dec 20. PMID:23261399<ref>PMID:23261399</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 3o6r" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
	*[[Dioxygenase\|Dioxygenase]]		*[[Dioxygenase\|Dioxygenase]]
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 14:44, 4 August 2016

OCA — Thu, 04 Aug 2016 14:44:42 GMT

←Older revision		Revision as of 14:44, 4 August 2016
Line 1:		Line 1:
		+
	==Crystal Structure of 4-Chlorocatechol Dioxygenase from Rhodococcus opacus 1CP in complex with pyrogallol==		==Crystal Structure of 4-Chlorocatechol Dioxygenase from Rhodococcus opacus 1CP in complex with pyrogallol==
	<StructureSection load='3o6r' size='340' side='right' caption='[[3o6r]], [[Resolution\|resolution]] 2.60Å' scene=''>		<StructureSection load='3o6r' size='340' side='right' caption='[[3o6r]], [[Resolution\|resolution]] 2.60Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MYY:(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL+PALMITATE'>MYY</scene>, <scene name='pdbligand=PYG:BENZENE-1,2,3-TRIOL'>PYG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MYY:(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL+PALMITATE'>MYY</scene>, <scene name='pdbligand=PYG:BENZENE-1,2,3-TRIOL'>PYG</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3o32\|3o32]], [[3o5u\|3o5u]], [[3o6j\|3o6j]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3o32\|3o32]], [[3o5u\|3o5u]], [[3o6j\|3o6j]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3o6r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o6r OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3o6r RCSB], [http://www.ebi.ac.uk/pdbsum/3o6r PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3o6r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o6r OCA], [http://pdbe.org/3o6r PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3o6r RCSB], [http://www.ebi.ac.uk/pdbsum/3o6r PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3o6r ProSAT]</span></td></tr>
	</table>		</table>

OCA at 21:22, 3 January 2015

OCA — Sat, 03 Jan 2015 21:22:02 GMT

←Older revision		Revision as of 21:22, 3 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3o6r]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodococcus_opacus Rhodococcus opacus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O6R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3O6R FirstGlance]. <br>		<table><tr><td colspan='2'>[[3o6r]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodococcus_opacus Rhodococcus opacus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O6R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3O6R FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MYY:(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL+PALMITATE'>MYY</scene>, <scene name='pdbligand=PYG:BENZENE-1,2,3-TRIOL'>PYG</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MYY:(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL+PALMITATE'>MYY</scene>, <scene name='pdbligand=PYG:BENZENE-1,2,3-TRIOL'>PYG</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3o32\|3o32]], [[3o5u\|3o5u]], [[3o6j\|3o6j]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3o32\|3o32]], [[3o5u\|3o5u]], [[3o6j\|3o6j]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3o6r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o6r OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3o6r RCSB], [http://www.ebi.ac.uk/pdbsum/3o6r PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3o6r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o6r OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3o6r RCSB], [http://www.ebi.ac.uk/pdbsum/3o6r PDBsum]</span></td></tr>
-	<table>	+	</table>
		+
		+	==See Also==
		+	*[[Dioxygenase\|Dioxygenase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Rhodococcus opacus]]		[[Category: Rhodococcus opacus]]
-	[[Category: Briganti, F.]]	+	[[Category: Briganti, F]]
-	[[Category: Ferraroni, M.]]	+	[[Category: Ferraroni, M]]
-	[[Category: Golovleva, L.]]	+	[[Category: Golovleva, L]]
-	[[Category: Kolomitseva, M.]]	+	[[Category: Kolomitseva, M]]
	[[Category: Beta barrel]]		[[Category: Beta barrel]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]

OCA at 10:31, 28 May 2014

OCA — Wed, 28 May 2014 10:31:29 GMT

←Older revision		Revision as of 10:31, 28 May 2014
Line 1:		Line 1:
-	~~[[Image:3o6r.jpg\|left\|200px]]~~	+	==Crystal Structure of 4-Chlorocatechol Dioxygenase from Rhodococcus opacus 1CP in complex with pyrogallol==
-		+	<StructureSection load='3o6r' size='340' side='right' caption='[[3o6r]], [[Resolution\|resolution]] 2.60Å' scene=''>
-	~~<!--~~	+	== Structural highlights ==
-	~~The line below this paragraph, containing "STRUCTURE_3o6r", creates the "Structure Box" on the page.~~	+	<table><tr><td colspan='2'>[[3o6r]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodococcus_opacus Rhodococcus opacus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O6R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3O6R FirstGlance]. <br>
-	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MYY:(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL+PALMITATE'>MYY</scene>, <scene name='pdbligand=PYG:BENZENE-1,2,3-TRIOL'>PYG</scene><br>
-	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~	+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3o32\|3o32]], [[3o5u\|3o5u]], [[3o6j\|3o6j]]</td></tr>
-	~~or leave the SCENE parameter empty for the default display.~~	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3o6r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o6r OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3o6r RCSB], [http://www.ebi.ac.uk/pdbsum/3o6r PDBsum]</span></td></tr>
-	~~-->~~	+	<table>
-	~~{{STRUCTURE_3o6r\| PDB=3o6r \| SCENE= }}~~	+	__TOC__
-		+	</StructureSection>
-	===Crystal Structure of 4-Chlorocatechol Dioxygenase from Rhodococcus opacus 1CP in complex with pyrogallol===	+
-		+
-		+
-	==~~About this Structure~~==	+
-	[[3o6r]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodococcus_opacus Rhodococcus opacus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O6R OCA].	+
	[[Category: Rhodococcus opacus]]		[[Category: Rhodococcus opacus]]
	[[Category: Briganti, F.]]		[[Category: Briganti, F.]]

OCA: Protected "3o6r" [edit=sysop:move=sysop]

OCA — Wed, 17 Aug 2011 06:26:14 GMT

Protected "3o6r" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:26, 17 August 2011

OCA at 06:26, 17 August 2011

OCA — Wed, 17 Aug 2011 06:26:11 GMT

←Older revision		Revision as of 06:26, 17 August 2011
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3o6r.jpg\|left\|200px]]

-	The ~~entry 3o6r~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3o6r", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3o6r\| PDB=3o6r \| SCENE= }}

-	~~Authors: Ferraroni, M., Briganti, F., Kolomitseva M., Golovleva L.~~	+	===Crystal Structure of 4-Chlorocatechol Dioxygenase from Rhodococcus opacus 1CP in complex with pyrogallol===

-	Description: Crystal Structure of 4-Chlorocatechol Dioxygenase from Rhodococcus opacus 1CP in complex with pyrogallol

-	~~''Page seeded by~~ [http://oca.weizmann.ac.il/oca OCA ] ~~on Wed Aug 11 23~~:37:~~59 2010''~~	+	==About this Structure==
		+	[[3o6r]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodococcus_opacus Rhodococcus opacus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O6R OCA].
		+	[[Category: Rhodococcus opacus]]
		+	[[Category: Briganti, F.]]
		+	[[Category: Ferraroni, M.]]
		+	[[Category: Golovleva, L.]]
		+	[[Category: Kolomitseva, M.]]
		+	[[Category: Beta barrel]]
		+	[[Category: Oxidoreductase]]

OCA at 19:30, 11 August 2010

OCA — Wed, 11 Aug 2010 19:30:41 GMT

←Older revision		Revision as of 19:30, 11 August 2010
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3o6r is ON HOLD	+	The entry 3o6r is ON HOLD until Paper Publication

-	Authors: Ferraroni, ~~M., Kolomitseva~~ M., Briganti, F., ~~Scozzafava, A~~., Golovleva, L.	+	Authors: Ferraroni, M., Briganti, F., Kolomitseva M., Golovleva L.

	Description: Crystal Structure of 4-Chlorocatechol Dioxygenase from Rhodococcus opacus 1CP in complex with pyrogallol		Description: Crystal Structure of 4-Chlorocatechol Dioxygenase from Rhodococcus opacus 1CP in complex with pyrogallol

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug ~~4 08~~:54:57 2010''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 11 23:37:59 2010''