3pju - Revision history

OCA at 10:41, 21 February 2024

OCA — Wed, 21 Feb 2024 10:41:20 GMT

←Older revision		Revision as of 10:41, 21 February 2024
Line 3:		Line 3:
	<StructureSection load='3pju' size='340' side='right'caption='[[3pju]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='3pju' size='340' side='right'caption='[[3pju]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3pju]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Psepf Psepf~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PJU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PJU FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3pju]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_fluorescens_Pf0-1 Pseudomonas fluorescens Pf0-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PJU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PJU FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d 3,2-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)'>C2E</scene>~~</td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.4991Å</td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3pjt\|3pjt]], [[3pjv\|3pjv]], [[3pjw\|3pjw]], [[3pjx\|3pjx]]</div></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d 3,2-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)'>C2E</scene></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lapD, Pfl01_0131 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=205922 PSEPF])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pju OCA], [https://pdbe.org/3pju PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pju RCSB], [https://www.ebi.ac.uk/pdbsum/3pju PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pju ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pju OCA], [https://pdbe.org/3pju PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pju RCSB], [https://www.ebi.ac.uk/pdbsum/3pju PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pju ProSAT]</span></td></tr>
	</table>		</table>
-	~~<div style~~=~~"background-color:#fffaf0;">~~	+	== Function ==
-	=~~= Publication Abstract from PubMed~~ ==	+	[https://www.uniprot.org/uniprot/Q3KK31_PSEPF Q3KK31_PSEPF]
-	The bacterial second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP) has emerged as a central regulator for biofilm formation. Increased cellular c-di-GMP levels lead to stable cell attachment, which in Pseudomonas fluorescens requires the transmembrane receptor LapD. LapD exhibits a conserved and widely used modular architecture containing a HAMP domain and degenerate diguanylate cyclase and phosphodiesterase domains. c-di-GMP binding to the LapD degenerate phosphodiesterase domain is communicated via the HAMP relay to the periplasmic domain, triggering sequestration of the protease LapG, thus preventing cleavage of the surface adhesin LapA. Here, we elucidate the molecular mechanism of autoinhibition and activation of LapD based on structure-function analyses and crystal structures of the entire periplasmic domain and the intracellular signaling unit in two different states. In the absence of c-di-GMP, the intracellular module assumes an inactive conformation. Binding of c-di-GMP to the phosphodiesterase domain disrupts the inactive state, permitting the formation of a trans-subunit dimer interface between adjacent phosphodiesterase domains via interactions conserved in c-di-GMP-degrading enzymes. Efficient mechanical coupling of the conformational changes across the membrane is realized through an extensively domain-swapped, unique periplasmic fold. Our structural and functional analyses identified a conserved system for the regulation of periplasmic proteases in a wide variety of bacteria, including many free-living and pathogenic species.	+
-		+
-	Structural Basis for c-di-GMP-Mediated Inside-Out Signaling Controlling Periplasmic Proteolysis.,Navarro MV, Newell PD, Krasteva PV, Chatterjee D, Madden DR, O'Toole GA, Sondermann H PLoS Biol. 2011 Feb 1;9(2):~~e1000588. PMID:21304926<ref>PMID:21304926<~~/~~ref>~~	+
-		+
-	~~From MEDLINE®~~/~~PubMed®, a database of the U~~.S. ~~National Library of Medicine.<br>~~	+
-	</~~div>~~	+
-	~~<div class="pdbe-citations 3pju" style="background-color:#fffaf0;"></div>~~	+
-	~~== References ==~~	+
-	~~<references~~/>	+
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Psepf~~]]	+	[[Category: Pseudomonas fluorescens Pf0-1]]
-	[[Category: Krasteva, P]]	+	[[Category: Krasteva P]]
-	[[Category: Navarro~~, M V.A S~~]]	+	[[Category: Navarro MVAS]]
-	[[Category: Sondermann, H]]	+	[[Category: Sondermann H]]
-	~~[[Category: C-di-gmp receptor]]~~	+
-	~~[[Category: Lyase]]~~	+
-	~~[[Category: Tim barrel~~]]	+

OCA at 08:42, 25 May 2022

OCA — Wed, 25 May 2022 08:42:31 GMT

←Older revision		Revision as of 08:42, 25 May 2022
Line 1:		Line 1:

	==Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, P6522==		==Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, P6522==
-	<StructureSection load='3pju' size='340' side='right' caption='[[3pju]], [[Resolution\|resolution]] 2.50Å' scene=''>	+	<StructureSection load='3pju' size='340' side='right'caption='[[3pju]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3pju]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Psepf Psepf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PJU OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3PJU FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3pju]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Psepf Psepf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PJU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PJU FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,~~3AS~~,5S,~~7AR~~,9R,10R,~~10AS~~,12S,~~14AR~~)-3,5,10,12-~~TETRAHYDROXY~~-5,12-~~DIOXIDOOCTAHYDRO~~-2H,7H-~~DIFURO~~[3,2-D 3,2-J][1,3,7,9,2,8]~~TETRAOXADIPHOSPHACYCLODODECINE~~-2,9-~~DIYL~~]~~BIS~~(2-~~AMINO~~-1,9-~~DIHYDRO~~-6H-~~PURIN~~-6-~~ONE~~)'>C2E</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d 3,2-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)'>C2E</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3pjt\|3pjt]], [[3pjv\|3pjv]], [[3pjw\|3pjw]], [[3pjx\|3pjx]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3pjt\|3pjt]], [[3pjv\|3pjv]], [[3pjw\|3pjw]], [[3pjx\|3pjx]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lapD, Pfl01_0131 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=205922 PSEPF])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lapD, Pfl01_0131 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=205922 PSEPF])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3pju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pju OCA], [~~http~~://pdbe.org/3pju PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3pju RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3pju PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3pju ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pju OCA], [https://pdbe.org/3pju PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pju RCSB], [https://www.ebi.ac.uk/pdbsum/3pju PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pju ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 22:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Psepf]]		[[Category: Psepf]]
	[[Category: Krasteva, P]]		[[Category: Krasteva, P]]

OCA at 00:31, 5 August 2016

OCA — Fri, 05 Aug 2016 00:31:19 GMT

←Older revision		Revision as of 00:31, 5 August 2016
Line 1:		Line 1:
		+
	==Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, P6522==		==Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, P6522==
	<StructureSection load='3pju' size='340' side='right' caption='[[3pju]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='3pju' size='340' side='right' caption='[[3pju]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3pju]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Pseudomonas_fluorescens Pseudomonas fluorescens~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PJU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PJU FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3pju]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Psepf Psepf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PJU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PJU FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10,12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3,2-D 3,2-J][1,3,7,9,2,8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO-1,9-DIHYDRO-6H-PURIN-6-ONE)'>C2E</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10,12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3,2-D 3,2-J][1,3,7,9,2,8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO-1,9-DIHYDRO-6H-PURIN-6-ONE)'>C2E</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3pjt\|3pjt]], [[3pjv\|3pjv]], [[3pjw\|3pjw]], [[3pjx\|3pjx]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3pjt\|3pjt]], [[3pjv\|3pjv]], [[3pjw\|3pjw]], [[3pjx\|3pjx]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lapD, Pfl01_0131 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~294 Pseudomonas fluorescens~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lapD, Pfl01_0131 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=205922 PSEPF])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3pju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pju OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3pju RCSB], [http://www.ebi.ac.uk/pdbsum/3pju PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3pju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pju OCA], [http://pdbe.org/3pju PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3pju RCSB], [http://www.ebi.ac.uk/pdbsum/3pju PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3pju ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 16:		Line 17:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3pju" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Pseudomonas fluorescens~~]]	+	[[Category: Psepf]]
	[[Category: Krasteva, P]]		[[Category: Krasteva, P]]
	[[Category: Navarro, M V.A S]]		[[Category: Navarro, M V.A S]]

OCA at 10:38, 19 December 2014

OCA — Fri, 19 Dec 2014 10:38:32 GMT

←Older revision		Revision as of 10:38, 19 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3pju\| PDB=3pju \| SCENE= }}~~	+	==Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, P6522==
-	===Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, P6522===	+	<StructureSection load='3pju' size='340' side='right' caption='[[3pju]], [[Resolution\|resolution]] 2.50Å' scene=''>
-	~~{{ABSTRACT_PUBMED_21304926}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3pju]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_fluorescens Pseudomonas fluorescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PJU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PJU FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10,12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3,2-D 3,2-J][1,3,7,9,2,8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO-1,9-DIHYDRO-6H-PURIN-6-ONE)'>C2E</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3pjt\|3pjt]], [[3pjv\|3pjv]], [[3pjw\|3pjw]], [[3pjx\|3pjx]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lapD, Pfl01_0131 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=294 Pseudomonas fluorescens])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3pju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pju OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3pju RCSB], [http://www.ebi.ac.uk/pdbsum/3pju PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The bacterial second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP) has emerged as a central regulator for biofilm formation. Increased cellular c-di-GMP levels lead to stable cell attachment, which in Pseudomonas fluorescens requires the transmembrane receptor LapD. LapD exhibits a conserved and widely used modular architecture containing a HAMP domain and degenerate diguanylate cyclase and phosphodiesterase domains. c-di-GMP binding to the LapD degenerate phosphodiesterase domain is communicated via the HAMP relay to the periplasmic domain, triggering sequestration of the protease LapG, thus preventing cleavage of the surface adhesin LapA. Here, we elucidate the molecular mechanism of autoinhibition and activation of LapD based on structure-function analyses and crystal structures of the entire periplasmic domain and the intracellular signaling unit in two different states. In the absence of c-di-GMP, the intracellular module assumes an inactive conformation. Binding of c-di-GMP to the phosphodiesterase domain disrupts the inactive state, permitting the formation of a trans-subunit dimer interface between adjacent phosphodiesterase domains via interactions conserved in c-di-GMP-degrading enzymes. Efficient mechanical coupling of the conformational changes across the membrane is realized through an extensively domain-swapped, unique periplasmic fold. Our structural and functional analyses identified a conserved system for the regulation of periplasmic proteases in a wide variety of bacteria, including many free-living and pathogenic species.

-	~~==About this Structure==~~	+	Structural Basis for c-di-GMP-Mediated Inside-Out Signaling Controlling Periplasmic Proteolysis.,Navarro MV, Newell PD, Krasteva PV, Chatterjee D, Madden DR, O'Toole GA, Sondermann H PLoS Biol. 2011 Feb 1;9(2):e1000588. PMID:21304926<ref>PMID:21304926</ref>
-	~~[[3pju]] is a~~ 1 ~~chain structure with sequence from [http~~:~~//en~~.~~wikipedia.org/wiki/Pseudomonas_fluorescens Pseudomonas fluorescens]. Full crystallographic information is available from [http~~:/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3PJU OCA].~~	+

-	==~~Reference~~==	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~<ref group="xtra">PMID:021304926</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	</div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Pseudomonas fluorescens]]		[[Category: Pseudomonas fluorescens]]
-	[[Category: Krasteva, P.]]	+	[[Category: Krasteva, P]]
-	[[Category: Navarro, M V.A S.]]	+	[[Category: Navarro, M V.A S]]
-	[[Category: Sondermann, H.]]	+	[[Category: Sondermann, H]]
	[[Category: C-di-gmp receptor]]		[[Category: C-di-gmp receptor]]
	[[Category: Lyase]]		[[Category: Lyase]]
	[[Category: Tim barrel]]		[[Category: Tim barrel]]

OCA at 08:05, 8 May 2013

OCA — Wed, 08 May 2013 08:05:40 GMT

←Older revision		Revision as of 08:05, 8 May 2013
Line 1:		Line 1:
-	[[Image:3pju.png\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3pju", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3pju\| PDB=3pju \| SCENE= }}		{{STRUCTURE_3pju\| PDB=3pju \| SCENE= }}
-
	===Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, P6522===		===Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, P6522===
-
-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_21304926}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 21304926 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_21304926}}		{{ABSTRACT_PUBMED_21304926}}

Line 22:		Line 7:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~21304926~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:021304926</ref><references group="xtra"/><references/>
	[[Category: Pseudomonas fluorescens]]		[[Category: Pseudomonas fluorescens]]
	[[Category: Krasteva, P.]]		[[Category: Krasteva, P.]]
	[[Category: Navarro, M V.A S.]]		[[Category: Navarro, M V.A S.]]
	[[Category: Sondermann, H.]]		[[Category: Sondermann, H.]]
		+	[[Category: C-di-gmp receptor]]
		+	[[Category: Lyase]]
		+	[[Category: Tim barrel]]

OCA at 09:18, 23 February 2011

OCA — Wed, 23 Feb 2011 09:18:02 GMT

←Older revision		Revision as of 09:18, 23 February 2011
Line 1:		Line 1:
-	[[Image:3pju.~~jpg~~\|left\|200px]]	+	[[Image:3pju.png\|left\|200px]]

	<!--		<!--
Line 11:		Line 11:
	===Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, P6522===		===Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, P6522===

		+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_21304926}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 21304926 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_21304926}}

	==About this Structure==		==About this Structure==
	[[3pju]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_fluorescens Pseudomonas fluorescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PJU OCA].		[[3pju]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_fluorescens Pseudomonas fluorescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PJU OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:21304926</ref><references group="xtra"/>
	[[Category: Pseudomonas fluorescens]]		[[Category: Pseudomonas fluorescens]]
	[[Category: Krasteva, P.]]		[[Category: Krasteva, P.]]
	[[Category: Navarro, M V.A S.]]		[[Category: Navarro, M V.A S.]]
	[[Category: Sondermann, H.]]		[[Category: Sondermann, H.]]

OCA: Protected "3pju" [edit=sysop:move=sysop]

OCA — Wed, 09 Feb 2011 06:11:55 GMT

Protected "3pju" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:11, 9 February 2011

OCA at 06:11, 9 February 2011

OCA — Wed, 09 Feb 2011 06:11:52 GMT

←Older revision		Revision as of 06:11, 9 February 2011
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3pju.jpg\|left\|200px]]

-	The ~~entry 3pju~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3pju", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3pju\| PDB=3pju \| SCENE= }}

-	~~Authors: Sondermann~~, ~~H., Navarro, M.V.A.S., Krasteva, P.~~	+	===Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, P6522===

-	Description: Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, P6522

-	~~''Page seeded by~~ [http://oca.weizmann.ac.il/oca OCA ] ~~on Thu Nov 18 00~~:35:~~05 2010''~~	+	==About this Structure==
		+	[[3pju]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_fluorescens Pseudomonas fluorescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PJU OCA].
		+	[[Category: Pseudomonas fluorescens]]
		+	[[Category: Krasteva, P.]]
		+	[[Category: Navarro, M V.A S.]]
		+	[[Category: Sondermann, H.]]

OCA: New page: '''Unreleased structure''' The entry 3pju is ON HOLD Authors: Sondermann, H., Navarro, M.V.A.S., Krasteva, P. Description: Structure of Pseudomonas fluorescence LapD EAL domain complex...

OCA — Wed, 17 Nov 2010 21:23:50 GMT

New page: '''Unreleased structure''' The entry 3pju is ON HOLD Authors: Sondermann, H., Navarro, M.V.A.S., Krasteva, P. Description: Structure of Pseudomonas fluorescence LapD EAL domain complex...

New page

'''Unreleased structure'''

The entry 3pju is ON HOLD

Authors: Sondermann, H., Navarro, M.V.A.S., Krasteva, P.

Description: Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, P6522

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Nov 18 00:35:05 2010''