3q7h - Revision history

OCA at 05:56, 8 June 2022

OCA — Wed, 08 Jun 2022 05:56:13 GMT

←Older revision		Revision as of 05:56, 8 June 2022
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	==Structure of the ClpP subunit of the ATP-dependent Clp Protease from Coxiella burnetii==		==Structure of the ClpP subunit of the ATP-dependent Clp Protease from Coxiella burnetii==
-	<StructureSection load='3q7h' size='340' side='right' caption='[[3q7h]], [[Resolution\|resolution]] 2.50Å' scene=''>	+	<StructureSection load='3q7h' size='340' side='right'caption='[[3q7h]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3q7h]] is a 14 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Coxbr Coxbr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q7H OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3Q7H FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3q7h]] is a 14 chain structure with sequence from [https://en.wikipedia.org/wiki/Coxbr Coxbr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q7H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3Q7H FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">clpP, COXBURSA331_A1213 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=360115 COXBR])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">clpP, COXBURSA331_A1213 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=360115 COXBR])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Endopeptidase_Clp Endopeptidase Clp], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.92 3.4.21.92] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Endopeptidase_Clp Endopeptidase Clp], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.92 3.4.21.92] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3q7h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3q7h OCA], [~~http~~://pdbe.org/3q7h PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3q7h RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3q7h PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3q7h ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3q7h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3q7h OCA], [https://pdbe.org/3q7h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3q7h RCSB], [https://www.ebi.ac.uk/pdbsum/3q7h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3q7h ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/CLPP_COXBR CLPP_COXBR]] Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.	+	[[https://www.uniprot.org/uniprot/CLPP_COXBR CLPP_COXBR]] Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.

	==See Also==		==See Also==
-	*[[Clp ~~Protease~~\|Clp ~~Protease~~]]	+	*[[Clp protease 3D structures\|Clp protease 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Coxbr]]		[[Category: Coxbr]]
	[[Category: Endopeptidase Clp]]		[[Category: Endopeptidase Clp]]
		+	[[Category: Large Structures]]
	[[Category: Anderson, S M]]		[[Category: Anderson, S M]]
	[[Category: Anderson, W F]]		[[Category: Anderson, W F]]

OCA at 08:46, 4 August 2016

OCA — Thu, 04 Aug 2016 08:46:00 GMT

←Older revision		Revision as of 08:46, 4 August 2016
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		+
	==Structure of the ClpP subunit of the ATP-dependent Clp Protease from Coxiella burnetii==		==Structure of the ClpP subunit of the ATP-dependent Clp Protease from Coxiella burnetii==
	<StructureSection load='3q7h' size='340' side='right' caption='[[3q7h]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='3q7h' size='340' side='right' caption='[[3q7h]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3q7h]] is a 14 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Coxiella_burnetii Coxiella burnetii~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q7H OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3Q7H FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3q7h]] is a 14 chain structure with sequence from [http://en.wikipedia.org/wiki/Coxbr Coxbr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q7H OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3Q7H FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">clpP, COXBURSA331_A1213 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~777 Coxiella burnetii~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">clpP, COXBURSA331_A1213 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=360115 COXBR])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Endopeptidase_Clp Endopeptidase Clp], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.92 3.4.21.92] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Endopeptidase_Clp Endopeptidase Clp], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.92 3.4.21.92] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3q7h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3q7h OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3q7h RCSB], [http://www.ebi.ac.uk/pdbsum/3q7h PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3q7h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3q7h OCA], [http://pdbe.org/3q7h PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3q7h RCSB], [http://www.ebi.ac.uk/pdbsum/3q7h PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3q7h ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 16:		Line 17:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Coxiella burnetii~~]]	+	[[Category: Coxbr]]
	[[Category: Endopeptidase Clp]]		[[Category: Endopeptidase Clp]]
	[[Category: Anderson, S M]]		[[Category: Anderson, S M]]

OCA at 07:28, 25 December 2014

OCA — Thu, 25 Dec 2014 07:28:26 GMT

←Older revision		Revision as of 07:28, 25 December 2014
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	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3q7h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3q7h OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3q7h RCSB], [http://www.ebi.ac.uk/pdbsum/3q7h PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3q7h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3q7h OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3q7h RCSB], [http://www.ebi.ac.uk/pdbsum/3q7h PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/CLPP_COXBR CLPP_COXBR]] Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.

	==See Also==		==See Also==

OCA at 12:47, 9 December 2014

OCA — Tue, 09 Dec 2014 12:47:20 GMT

←Older revision		Revision as of 12:47, 9 December 2014
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-	~~[[Image:3q7h.png\|left\|200px]]~~	+	==Structure of the ClpP subunit of the ATP-dependent Clp Protease from Coxiella burnetii==
-		+	<StructureSection load='3q7h' size='340' side='right' caption='[[3q7h]], [[Resolution\|resolution]] 2.50Å' scene=''>
-	~~{{STRUCTURE_3q7h\| PDB=3q7h \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[3q7h]] is a 14 chain structure with sequence from [http://en.wikipedia.org/wiki/Coxiella_burnetii Coxiella burnetii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q7H OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3Q7H FirstGlance]. <br>
-	===Structure of the ClpP subunit of the ATP-dependent Clp Protease from Coxiella burnetii===	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">clpP, COXBURSA331_A1213 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=777 Coxiella burnetii])</td></tr>
-	==~~About this Structure~~==	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Endopeptidase_Clp Endopeptidase Clp], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.92 3.4.21.92] </span></td></tr>
-	[[3q7h]] is a 14 chain structure with sequence from [http://en.wikipedia.org/wiki/Coxiella_burnetii Coxiella burnetii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q7H OCA].	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3q7h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3q7h OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3q7h RCSB], [http://www.ebi.ac.uk/pdbsum/3q7h PDBsum]</span></td></tr>
		+	</table>

	==See Also==		==See Also==
	*[[Clp Protease\|Clp Protease]]		*[[Clp Protease\|Clp Protease]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Coxiella burnetii]]		[[Category: Coxiella burnetii]]
	[[Category: Endopeptidase Clp]]		[[Category: Endopeptidase Clp]]
-	[[Category: Anderson, S M.]]	+	[[Category: Anderson, S M]]
-	[[Category: Anderson, W F.]]	+	[[Category: Anderson, W F]]
-	[[Category: ~~CSGID, Center for~~ Structural ~~Genomics of Infectious Diseases.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Gordon, E.]]	+	[[Category: Gordon, E]]
-	[[Category: Hasseman, J.]]	+	[[Category: Hasseman, J]]
-	[[Category: Savchenko, A.]]	+	[[Category: Savchenko, A]]
-	[[Category: Wawrzak, Z.]]	+	[[Category: Wawrzak, Z]]
	[[Category: Alpha and beta protein]]		[[Category: Alpha and beta protein]]
-	[[Category: Center for structural genomics of infectious disease]]
	[[Category: Clpp/crotonase fold]]		[[Category: Clpp/crotonase fold]]
	[[Category: Csgid]]		[[Category: Csgid]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
-	[[Category: Structural genomic]]

OCA at 14:11, 20 October 2012

OCA — Sat, 20 Oct 2012 14:11:51 GMT

←Older revision		Revision as of 14:11, 20 October 2012
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	[[Image:3q7h.png\|left\|200px]]		[[Image:3q7h.png\|left\|200px]]

-	<!--
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-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
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	{{STRUCTURE_3q7h\| PDB=3q7h \| SCENE= }}		{{STRUCTURE_3q7h\| PDB=3q7h \| SCENE= }}

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	==About this Structure==		==About this Structure==
	[[3q7h]] is a 14 chain structure with sequence from [http://en.wikipedia.org/wiki/Coxiella_burnetii Coxiella burnetii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q7H OCA].		[[3q7h]] is a 14 chain structure with sequence from [http://en.wikipedia.org/wiki/Coxiella_burnetii Coxiella burnetii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q7H OCA].
		+
		+	==See Also==
		+	*[[Clp Protease\|Clp Protease]]
	[[Category: Coxiella burnetii]]		[[Category: Coxiella burnetii]]
	[[Category: Endopeptidase Clp]]		[[Category: Endopeptidase Clp]]
Line 23:		Line 20:
	[[Category: Savchenko, A.]]		[[Category: Savchenko, A.]]
	[[Category: Wawrzak, Z.]]		[[Category: Wawrzak, Z.]]
		+	[[Category: Alpha and beta protein]]
		+	[[Category: Center for structural genomics of infectious disease]]
		+	[[Category: Clpp/crotonase fold]]
		+	[[Category: Csgid]]
		+	[[Category: Hydrolase]]
		+	[[Category: Structural genomic]]

OCA at 04:27, 13 April 2011

OCA — Wed, 13 Apr 2011 04:27:28 GMT

←Older revision		Revision as of 04:27, 13 April 2011
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-	[[Image:3q7h.~~jpg~~\|left\|200px]]	+	[[Image:3q7h.png\|left\|200px]]

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OCA: Protected "3q7h" [edit=sysop:move=sysop]

OCA — Wed, 12 Jan 2011 05:20:57 GMT

Protected "3q7h" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:20, 12 January 2011