3qnj - Revision history

OCA at 10:48, 21 February 2024

OCA — Wed, 21 Feb 2024 10:48:34 GMT

←Older revision		Revision as of 10:48, 21 February 2024
Line 3:		Line 3:
	<StructureSection load='3qnj' size='340' side='right'caption='[[3qnj]], [[Resolution\|resolution]] 2.28Å' scene=''>		<StructureSection load='3qnj' size='340' side='right'caption='[[3qnj]], [[Resolution\|resolution]] 2.28Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3qnj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Ecoli Ecoli~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QNJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QNJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3qnj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12] and [https://en.wikipedia.org/wiki/Oncopeltus_fasciatus Oncopeltus fasciatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QNJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QNJ FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.28Å</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=ORN:L-ORNITHINE'>ORN</scene><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ORN:L-ORNITHINE'>ORN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	~~<tr id~~='~~related'><td class~~=~~"sblockLbl"><b>[[Related_structure\|Related~~:~~]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;~~'>~~[[1dkx\|1dkx]], [[1dky\|1dky]], [[1dkz\|1dkz]], [[3dpo\|3dpo]], [[3dpp\|3dpp]], [[3dpq\|3dpq]]~~</~~div~~>~~</td></tr>~~	+
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">dnaK, groP, grpF, seg ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qnj OCA], [https://pdbe.org/3qnj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qnj RCSB], [https://www.ebi.ac.uk/pdbsum/3qnj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qnj ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qnj OCA], [https://pdbe.org/3qnj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qnj RCSB], [https://www.ebi.ac.uk/pdbsum/3qnj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qnj ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/DNAK_ECOLI DNAK_ECOLI]] Plays an essential role in the initiation of phage lambda DNA replication, where it acts in an ATP-dependent fashion with the DnaJ protein to release lambda O and P proteins from the preprimosomal complex. DnaK is also involved in chromosomal DNA replication, possibly through an analogous interaction with the DnaA protein. Also participates actively in the response to hyperosmotic shock.[HAMAP-Rule:MF_00332]	+	[https://www.uniprot.org/uniprot/DNAK_ECOLI DNAK_ECOLI] Plays an essential role in the initiation of phage lambda DNA replication, where it acts in an ATP-dependent fashion with the DnaJ protein to release lambda O and P proteins from the preprimosomal complex. DnaK is also involved in chromosomal DNA replication, possibly through an analogous interaction with the DnaA protein. Also participates actively in the response to hyperosmotic shock.[HAMAP-Rule:MF_00332]

	==See Also==		==See Also==
Line 17:		Line 15:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Ecoli~~]]	+	[[Category: Escherichia coli K-12]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Straeter, N~~]]	+	[[Category: Oncopeltus fasciatus]]
-	[[Category: ~~Zahn, M~~]]	+	[[Category: Straeter N]]
-	[[Category: ~~Chaperone-antimicrobial protein complex]]~~	+	[[Category: Zahn M]]
-	~~[[Category: Peptide/protein binding~~]]	+

OCA at 06:16, 8 June 2022

OCA — Wed, 08 Jun 2022 06:16:05 GMT

←Older revision		Revision as of 06:16, 8 June 2022
Line 1:		Line 1:

	==Crystal structure of the substrate binding domain of E.coli DnaK in complex with the antimicrobial peptide oncocin==		==Crystal structure of the substrate binding domain of E.coli DnaK in complex with the antimicrobial peptide oncocin==
-	<StructureSection load='3qnj' size='340' side='right' caption='[[3qnj]], [[Resolution\|resolution]] 2.28Å' scene=''>	+	<StructureSection load='3qnj' size='340' side='right'caption='[[3qnj]], [[Resolution\|resolution]] 2.28Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3qnj]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QNJ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3QNJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3qnj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QNJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QNJ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ORN:L-ORNITHINE'>ORN</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ORN:L-ORNITHINE'>ORN</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dkx\|1dkx]], [[1dky\|1dky]], [[1dkz\|1dkz]], [[3dpo\|3dpo]], [[3dpp\|3dpp]], [[3dpq\|3dpq]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1dkx\|1dkx]], [[1dky\|1dky]], [[1dkz\|1dkz]], [[3dpo\|3dpo]], [[3dpp\|3dpp]], [[3dpq\|3dpq]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">dnaK, groP, grpF, seg ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">dnaK, groP, grpF, seg ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3qnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qnj OCA], [~~http~~://pdbe.org/3qnj PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3qnj RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3qnj PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3qnj ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qnj OCA], [https://pdbe.org/3qnj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qnj RCSB], [https://www.ebi.ac.uk/pdbsum/3qnj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qnj ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/DNAK_ECOLI DNAK_ECOLI]] Plays an essential role in the initiation of phage lambda DNA replication, where it acts in an ATP-dependent fashion with the DnaJ protein to release lambda O and P proteins from the preprimosomal complex. DnaK is also involved in chromosomal DNA replication, possibly through an analogous interaction with the DnaA protein. Also participates actively in the response to hyperosmotic shock.[HAMAP-Rule:MF_00332]	+	[[https://www.uniprot.org/uniprot/DNAK_ECOLI DNAK_ECOLI]] Plays an essential role in the initiation of phage lambda DNA replication, where it acts in an ATP-dependent fashion with the DnaJ protein to release lambda O and P proteins from the preprimosomal complex. DnaK is also involved in chromosomal DNA replication, possibly through an analogous interaction with the DnaA protein. Also participates actively in the response to hyperosmotic shock.[HAMAP-Rule:MF_00332]
		+
		+	==See Also==
		+	*[[Heat Shock Protein structures\|Heat Shock Protein structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Ecoli]]		[[Category: Ecoli]]
		+	[[Category: Large Structures]]
	[[Category: Straeter, N]]		[[Category: Straeter, N]]
	[[Category: Zahn, M]]		[[Category: Zahn, M]]
	[[Category: Chaperone-antimicrobial protein complex]]		[[Category: Chaperone-antimicrobial protein complex]]
	[[Category: Peptide/protein binding]]		[[Category: Peptide/protein binding]]

OCA at 09:18, 8 November 2017

OCA — Wed, 08 Nov 2017 09:18:15 GMT

←Older revision		Revision as of 09:18, 8 November 2017
Line 12:		Line 12:
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/DNAK_ECOLI DNAK_ECOLI]] Plays an essential role in the initiation of phage lambda DNA replication, where it acts in an ATP-dependent fashion with the DnaJ protein to release lambda O and P proteins from the preprimosomal complex. DnaK is also involved in chromosomal DNA replication, possibly through an analogous interaction with the DnaA protein. Also participates actively in the response to hyperosmotic shock.[HAMAP-Rule:MF_00332]		[[http://www.uniprot.org/uniprot/DNAK_ECOLI DNAK_ECOLI]] Plays an essential role in the initiation of phage lambda DNA replication, where it acts in an ATP-dependent fashion with the DnaJ protein to release lambda O and P proteins from the preprimosomal complex. DnaK is also involved in chromosomal DNA replication, possibly through an analogous interaction with the DnaA protein. Also participates actively in the response to hyperosmotic shock.[HAMAP-Rule:MF_00332]
-
-	==See Also==
-	*[[Heat Shock Proteins\|Heat Shock Proteins]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 19:32, 5 August 2016

OCA — Fri, 05 Aug 2016 19:32:03 GMT

←Older revision		Revision as of 19:32, 5 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of the substrate binding domain of E.coli DnaK in complex with the antimicrobial peptide oncocin==		==Crystal structure of the substrate binding domain of E.coli DnaK in complex with the antimicrobial peptide oncocin==
	<StructureSection load='3qnj' size='340' side='right' caption='[[3qnj]], [[Resolution\|resolution]] 2.28Å' scene=''>		<StructureSection load='3qnj' size='340' side='right' caption='[[3qnj]], [[Resolution\|resolution]] 2.28Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3qnj]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli Escherichia coli~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QNJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3QNJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3qnj]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QNJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3QNJ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ORN:L-ORNITHINE'>ORN</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ORN:L-ORNITHINE'>ORN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dkx\|1dkx]], [[1dky\|1dky]], [[1dkz\|1dkz]], [[3dpo\|3dpo]], [[3dpp\|3dpp]], [[3dpq\|3dpq]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dkx\|1dkx]], [[1dky\|1dky]], [[1dkz\|1dkz]], [[3dpo\|3dpo]], [[3dpp\|3dpp]], [[3dpq\|3dpq]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">dnaK, groP, grpF, seg ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~562 Escherichia coli~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">dnaK, groP, grpF, seg ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qnj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3qnj RCSB], [http://www.ebi.ac.uk/pdbsum/3qnj PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qnj OCA], [http://pdbe.org/3qnj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3qnj RCSB], [http://www.ebi.ac.uk/pdbsum/3qnj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3qnj ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/DNAK_ECOLI DNAK_ECOLI]] Plays an essential role in the initiation of phage lambda DNA replication, where it acts in an ATP-dependent fashion with the DnaJ protein to release lambda O and P proteins from the preprimosomal complex. DnaK is also involved in chromosomal DNA replication, possibly through an analogous interaction with the DnaA protein. Also participates actively in the response to hyperosmotic shock.[HAMAP-Rule:MF_00332]		[[http://www.uniprot.org/uniprot/DNAK_ECOLI DNAK_ECOLI]] Plays an essential role in the initiation of phage lambda DNA replication, where it acts in an ATP-dependent fashion with the DnaJ protein to release lambda O and P proteins from the preprimosomal complex. DnaK is also involved in chromosomal DNA replication, possibly through an analogous interaction with the DnaA protein. Also participates actively in the response to hyperosmotic shock.[HAMAP-Rule:MF_00332]
		+
		+	==See Also==
		+	*[[Heat Shock Proteins\|Heat Shock Proteins]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Escherichia coli~~]]	+	[[Category: Ecoli]]
	[[Category: Straeter, N]]		[[Category: Straeter, N]]
	[[Category: Zahn, M]]		[[Category: Zahn, M]]
	[[Category: Chaperone-antimicrobial protein complex]]		[[Category: Chaperone-antimicrobial protein complex]]
	[[Category: Peptide/protein binding]]		[[Category: Peptide/protein binding]]

OCA at 21:20, 25 December 2014

OCA — Thu, 25 Dec 2014 21:20:06 GMT

←Older revision		Revision as of 21:20, 25 December 2014
Line 9:		Line 9:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qnj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3qnj RCSB], [http://www.ebi.ac.uk/pdbsum/3qnj PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qnj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3qnj RCSB], [http://www.ebi.ac.uk/pdbsum/3qnj PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/DNAK_ECOLI DNAK_ECOLI]] Plays an essential role in the initiation of phage lambda DNA replication, where it acts in an ATP-dependent fashion with the DnaJ protein to release lambda O and P proteins from the preprimosomal complex. DnaK is also involved in chromosomal DNA replication, possibly through an analogous interaction with the DnaA protein. Also participates actively in the response to hyperosmotic shock.[HAMAP-Rule:MF_00332]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 10:06, 19 December 2014

OCA — Fri, 19 Dec 2014 10:06:57 GMT

←Older revision		Revision as of 10:06, 19 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3qnj\| PDB=3qnj \| SCENE= }}~~	+	==Crystal structure of the substrate binding domain of E.coli DnaK in complex with the antimicrobial peptide oncocin==
-	===Crystal structure of the substrate binding domain of E.coli DnaK in complex with the antimicrobial peptide oncocin===	+	<StructureSection load='3qnj' size='340' side='right' caption='[[3qnj]], [[Resolution\|resolution]] 2.28Å' scene=''>
-		+	== Structural highlights ==
-	==~~Function~~==	+	<table><tr><td colspan='2'>[[3qnj]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QNJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3QNJ FirstGlance]. <br>
-	[[~~http://www.uniprot.org/uniprot/DNAK_ECOLI DNAK_ECOLI~~]] ~~Plays an essential role in the initiation of phage lambda DNA replication~~, where it acts in an ATP-dependent fashion with the DnaJ protein to release lambda O and P proteins from the preprimosomal complex. DnaK is also involved in chromosomal DNA replication, possibly through an analogous interaction with the DnaA protein. Also participates actively in the response to hyperosmotic shock.[~~HAMAP-Rule:MF_00332~~]	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ORN:L-ORNITHINE'>ORN</scene></td></tr>
-	==~~About this Structure~~==	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dkx\|1dkx]], [[1dky\|1dky]], [[1dkz\|1dkz]], [[3dpo\|3dpo]], [[3dpp\|3dpp]], [[3dpq\|3dpq]]</td></tr>
-	[[3qnj]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QNJ OCA].	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">dnaK, groP, grpF, seg ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
-		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qnj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3qnj RCSB], [http://www.ebi.ac.uk/pdbsum/3qnj PDBsum]</span></td></tr>
-	==~~Reference~~==	+	</table>
-	<~~ref group~~="~~xtra~~">~~PMID~~:~~021387510~~</~~ref~~><~~references group~~="~~xtra~~"/><~~references~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
-	[[Category: Straeter, N.]]	+	[[Category: Straeter, N]]
-	[[Category: Zahn, M.]]	+	[[Category: Zahn, M]]
	[[Category: Chaperone-antimicrobial protein complex]]		[[Category: Chaperone-antimicrobial protein complex]]
	[[Category: Peptide/protein binding]]		[[Category: Peptide/protein binding]]

OCA at 08:05, 8 May 2013

OCA — Wed, 08 May 2013 08:05:43 GMT

←Older revision		Revision as of 08:05, 8 May 2013
Line 1:		Line 1:
-	[[Image:3qnj.png\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3qnj", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3qnj\| PDB=3qnj \| SCENE= }}		{{STRUCTURE_3qnj\| PDB=3qnj \| SCENE= }}
-
	===Crystal structure of the substrate binding domain of E.coli DnaK in complex with the antimicrobial peptide oncocin===		===Crystal structure of the substrate binding domain of E.coli DnaK in complex with the antimicrobial peptide oncocin===

		+	==Function==
		+	[[http://www.uniprot.org/uniprot/DNAK_ECOLI DNAK_ECOLI]] Plays an essential role in the initiation of phage lambda DNA replication, where it acts in an ATP-dependent fashion with the DnaJ protein to release lambda O and P proteins from the preprimosomal complex. DnaK is also involved in chromosomal DNA replication, possibly through an analogous interaction with the DnaA protein. Also participates actively in the response to hyperosmotic shock.[HAMAP-Rule:MF_00332]

	==About this Structure==		==About this Structure==
Line 16:		Line 9:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:021387510</ref><references group="xtra"/>	+	<ref group="xtra">PMID:021387510</ref><references group="xtra"/><references/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Straeter, N.]]		[[Category: Straeter, N.]]
	[[Category: Zahn, M.]]		[[Category: Zahn, M.]]
		+	[[Category: Chaperone-antimicrobial protein complex]]
		+	[[Category: Peptide/protein binding]]

OCA at 03:54, 12 May 2011

OCA — Thu, 12 May 2011 03:54:44 GMT

←Older revision		Revision as of 03:54, 12 May 2011
Line 16:		Line 16:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~21387510~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:021387510</ref><references group="xtra"/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Straeter, N.]]		[[Category: Straeter, N.]]
	[[Category: Zahn, M.]]		[[Category: Zahn, M.]]

OCA at 07:18, 30 March 2011

OCA — Wed, 30 Mar 2011 07:18:16 GMT

←Older revision		Revision as of 07:18, 30 March 2011
Line 1:		Line 1:
-	[[Image:3qnj.~~jpg~~\|left\|200px]]	+	[[Image:3qnj.png\|left\|200px]]

	<!--		<!--

OCA at 07:02, 23 March 2011

OCA — Wed, 23 Mar 2011 07:02:46 GMT

←Older revision		Revision as of 07:02, 23 March 2011
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3qnj.jpg\|left\|200px]]

-	The ~~entry 3qnj~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3qnj", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3qnj\| PDB=3qnj \| SCENE= }}

-	~~Authors: Zahn, M., Straeter, N~~.	+	===Crystal structure of the substrate binding domain of E.coli DnaK in complex with the antimicrobial peptide oncocin===

-	~~Description: Crystal~~ structure ~~of the substrate binding domain of E~~.coli ~~DnaK in complex with the antimicrobial peptide oncocin~~	+
		+	==About this Structure==
		+	[[3qnj]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QNJ OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:21387510</ref><references group="xtra"/>
		+	[[Category: Escherichia coli]]
		+	[[Category: Straeter, N.]]
		+	[[Category: Zahn, M.]]