3r51 - Revision history

OCA at 12:10, 14 March 2024

OCA — Thu, 14 Mar 2024 12:10:36 GMT

←Older revision		Revision as of 12:10, 14 March 2024
Line 3:		Line 3:
	<StructureSection load='3r51' size='340' side='right'caption='[[3r51]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='3r51' size='340' side='right'caption='[[3r51]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3r51]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Convolvulus_batatas Convolvulus~~ batatas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R51 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3R51 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3r51]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ipomoea_batatas Ipomoea batatas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R51 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3R51 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=MMA:O1~~-~~METHYL-MANNOSE'>MMA</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.1Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max~~-~~height: 3em;~~'>~~[[3r50\|3r50]], [[3r52\|3r52]], [[3r53\|3r53]]~~</~~div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3r51 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r51 OCA], [https://pdbe.org/3r51 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3r51 RCSB], [https://www.ebi.ac.uk/pdbsum/3r51 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3r51 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3r51 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r51 OCA], [https://pdbe.org/3r51 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3r51 RCSB], [https://www.ebi.ac.uk/pdbsum/3r51 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3r51 ProSAT]</span></td></tr>
	</table>		</table>
-	~~<div style~~=~~"background-color:#fffaf0;">~~	+	== Function ==
-	=~~= Publication Abstract from PubMed~~ ==	+	[https://www.uniprot.org/uniprot/IPO_IPOBA IPO_IPOBA] Lectin involved in defense reactions of the leaves in response to wounding by herbivorous insects and pathogens (Probable). Retards the growth and development of silkworm thus reducing their survival rates. Has hemagglutinating activity against human erythrocytes (Ref.4).<ref>PMID:22808208</ref>
-	~~Many proteins are induced~~ in the ~~plant defense~~ response to ~~biotic stress or mechanical~~ wounding~~. One group is lectins. Ipomoelin (IPO) is one of the wound-inducible proteins of sweet potato (Ipomoea batatas cv. Tainung 57)~~ and ~~is a Jacalin-related lectin~~ (~~JRL~~). ~~In this study, we resolved~~ the ~~crystal structures of IPO in its apo form~~ and in complex with carbohydrates such as methyl alpha-D-mannopyranoside (Me-Man), methyl alpha-D-glucopyranoside (Me-Glc), and methyl alpha-D-galactopyranoside (Me-Gal) in different space groups. The packing diagrams indicated that IPO might represent a compact tetrameric association in the JRL family. The protomer of ~~IPO showed a canonical beta-prism fold with 12 strands of beta-sheets but with 2 additional short beta-strands at the N terminus~~. ~~A truncated IPO~~ (~~DeltaN10IPO) by removing the 2 short beta-strands of the N terminus was used to reveal its role in a tetrameric association~~. ~~Gel filtration chromatography confirmed IPO as a tetrameric form in solution. Isothermal titration calorimetry determined the binding constants (K(A~~)~~) of IPO and DeltaN10IPO against various carbohydrates~~. IPO could bind to Me-Man, Me-Glc, and Me-Gal with similar binding constants. In contrast, DeltaN10IPO showed high binding ability to Me-Man and Me-Glc but could not bind to Me-Gal. Our structural and functional analysis of IPO revealed that its compact tetrameric association and carbohydrate binding polyspecificity could be regulated by the 2 additional N-terminal beta-strands. The versatile carbohydrate binding properties of IPO might play a role in plant defense.	+
-		+
-	Ipomoelin, a jacalin-related lectin with a compact tetrameric association and versatile carbohydrate binding properties regulated by its N terminus.,Chang WC, Liu KL, Hsu FC, Jeng ST, Cheng YS PLoS One. 2012;7(7):e40618. Epub 2012 Jul 11. PMID:22808208<ref>PMID:22808208</ref>	+
-		+
-	~~From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>~~	+
-	~~</div>~~	+
-	~~<div class="pdbe-citations 3r51" style="background-color:#fffaf0;"></div~~>	+
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Convolvulus~~ batatas]]	+	[[Category: Ipomoea batatas]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Chang~~, W C~~]]	+	[[Category: Chang WC]]
-	[[Category: Cheng~~, Y S~~]]	+	[[Category: Cheng YS]]
-	[[Category: Jeng~~, S T~~]]	+	[[Category: Jeng ST]]
-	[[Category: Liu~~, K L]]~~	+	[[Category: Liu KL]]
-	~~[[Category: Beta prism]]~~	+
-	~~[[Category: Carbohydrate-binding protein]]~~	+
-	~~[[Category: Carbohydrate/sugar binding~~]]	+

OCA at 05:49, 15 June 2022

OCA — Wed, 15 Jun 2022 05:49:14 GMT

←Older revision		Revision as of 05:49, 15 June 2022
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	==Structure analysis of a wound-inducible lectin ipomoelin from sweet potato==		==Structure analysis of a wound-inducible lectin ipomoelin from sweet potato==
-	<StructureSection load='3r51' size='340' side='right' caption='[[3r51]], [[Resolution\|resolution]] 2.10Å' scene=''>	+	<StructureSection load='3r51' size='340' side='right'caption='[[3r51]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3r51]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Convolvulus_batatas Convolvulus batatas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R51 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3R51 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3r51]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Convolvulus_batatas Convolvulus batatas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R51 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3R51 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3r50\|3r50]], [[3r52\|3r52]], [[3r53\|3r53]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3r50\|3r50]], [[3r52\|3r52]], [[3r53\|3r53]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3r51 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r51 OCA], [~~http~~://pdbe.org/3r51 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3r51 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3r51 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3r51 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3r51 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r51 OCA], [https://pdbe.org/3r51 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3r51 RCSB], [https://www.ebi.ac.uk/pdbsum/3r51 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3r51 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 22:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Convolvulus batatas]]		[[Category: Convolvulus batatas]]
		+	[[Category: Large Structures]]
	[[Category: Chang, W C]]		[[Category: Chang, W C]]
	[[Category: Cheng, Y S]]		[[Category: Cheng, Y S]]

OCA at 08:46, 5 August 2016

OCA — Fri, 05 Aug 2016 08:46:59 GMT

←Older revision		Revision as of 08:46, 5 August 2016
Line 1:		Line 1:
		+
	==Structure analysis of a wound-inducible lectin ipomoelin from sweet potato==		==Structure analysis of a wound-inducible lectin ipomoelin from sweet potato==
	<StructureSection load='3r51' size='340' side='right' caption='[[3r51]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='3r51' size='340' side='right' caption='[[3r51]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3r51]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Ipomoea_batatas Ipomoea~~ batatas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R51 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3R51 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3r51]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Convolvulus_batatas Convolvulus batatas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R51 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3R51 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3r50\|3r50]], [[3r52\|3r52]], [[3r53\|3r53]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3r50\|3r50]], [[3r52\|3r52]], [[3r53\|3r53]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3r51 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r51 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3r51 RCSB], [http://www.ebi.ac.uk/pdbsum/3r51 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3r51 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r51 OCA], [http://pdbe.org/3r51 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3r51 RCSB], [http://www.ebi.ac.uk/pdbsum/3r51 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3r51 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 15:		Line 16:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3r51" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Ipomoea~~ batatas]]	+	[[Category: Convolvulus batatas]]
	[[Category: Chang, W C]]		[[Category: Chang, W C]]
	[[Category: Cheng, Y S]]		[[Category: Cheng, Y S]]

OCA at 21:53, 3 January 2015

OCA — Sat, 03 Jan 2015 21:53:23 GMT

←Older revision		Revision as of 21:53, 3 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3r51]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ipomoea_batatas Ipomoea batatas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R51 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3R51 FirstGlance]. <br>		<table><tr><td colspan='2'>[[3r51]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ipomoea_batatas Ipomoea batatas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R51 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3R51 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3r50\|3r50]], [[3r52\|3r52]], [[3r53\|3r53]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3r50\|3r50]], [[3r52\|3r52]], [[3r53\|3r53]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3r51 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r51 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3r51 RCSB], [http://www.ebi.ac.uk/pdbsum/3r51 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3r51 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r51 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3r51 RCSB], [http://www.ebi.ac.uk/pdbsum/3r51 PDBsum]</span></td></tr>
-	<table>	+	</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 13:		Line 13:
	Ipomoelin, a jacalin-related lectin with a compact tetrameric association and versatile carbohydrate binding properties regulated by its N terminus.,Chang WC, Liu KL, Hsu FC, Jeng ST, Cheng YS PLoS One. 2012;7(7):e40618. Epub 2012 Jul 11. PMID:22808208<ref>PMID:22808208</ref>		Ipomoelin, a jacalin-related lectin with a compact tetrameric association and versatile carbohydrate binding properties regulated by its N terminus.,Chang WC, Liu KL, Hsu FC, Jeng ST, Cheng YS PLoS One. 2012;7(7):e40618. Epub 2012 Jul 11. PMID:22808208<ref>PMID:22808208</ref>

-	From ~~MEDLINEÂ®~~/~~PubMedÂ®~~, a database of the U.S. National Library of Medicine.<br>	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
	== References ==		== References ==
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Ipomoea batatas]]		[[Category: Ipomoea batatas]]
-	[[Category: Chang, W C.]]	+	[[Category: Chang, W C]]
-	[[Category: Cheng, Y S.]]	+	[[Category: Cheng, Y S]]
-	[[Category: Jeng, S T.]]	+	[[Category: Jeng, S T]]
-	[[Category: Liu, K L.]]	+	[[Category: Liu, K L]]
	[[Category: Beta prism]]		[[Category: Beta prism]]
	[[Category: Carbohydrate-binding protein]]		[[Category: Carbohydrate-binding protein]]
	[[Category: Carbohydrate/sugar binding]]		[[Category: Carbohydrate/sugar binding]]

OCA at 04:45, 5 June 2014

OCA — Thu, 05 Jun 2014 04:45:23 GMT

←Older revision		Revision as of 04:45, 5 June 2014
Line 1:		Line 1:
-	[[~~Image:~~3r51.~~png~~\|~~left~~\|~~200px~~]]	+	==Structure analysis of a wound-inducible lectin ipomoelin from sweet potato==
		+	<StructureSection load='3r51' size='340' side='right' caption='[[3r51]], [[Resolution\|resolution]] 2.10Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3r51]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ipomoea_batatas Ipomoea batatas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R51 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3R51 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3r50\|3r50]], [[3r52\|3r52]], [[3r53\|3r53]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3r51 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r51 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3r51 RCSB], [http://www.ebi.ac.uk/pdbsum/3r51 PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Many proteins are induced in the plant defense response to biotic stress or mechanical wounding. One group is lectins. Ipomoelin (IPO) is one of the wound-inducible proteins of sweet potato (Ipomoea batatas cv. Tainung 57) and is a Jacalin-related lectin (JRL). In this study, we resolved the crystal structures of IPO in its apo form and in complex with carbohydrates such as methyl alpha-D-mannopyranoside (Me-Man), methyl alpha-D-glucopyranoside (Me-Glc), and methyl alpha-D-galactopyranoside (Me-Gal) in different space groups. The packing diagrams indicated that IPO might represent a compact tetrameric association in the JRL family. The protomer of IPO showed a canonical beta-prism fold with 12 strands of beta-sheets but with 2 additional short beta-strands at the N terminus. A truncated IPO (DeltaN10IPO) by removing the 2 short beta-strands of the N terminus was used to reveal its role in a tetrameric association. Gel filtration chromatography confirmed IPO as a tetrameric form in solution. Isothermal titration calorimetry determined the binding constants (K(A)) of IPO and DeltaN10IPO against various carbohydrates. IPO could bind to Me-Man, Me-Glc, and Me-Gal with similar binding constants. In contrast, DeltaN10IPO showed high binding ability to Me-Man and Me-Glc but could not bind to Me-Gal. Our structural and functional analysis of IPO revealed that its compact tetrameric association and carbohydrate binding polyspecificity could be regulated by the 2 additional N-terminal beta-strands. The versatile carbohydrate binding properties of IPO might play a role in plant defense.

-	~~{{STRUCTURE_3r51\| PDB=3r51 \| SCENE= }}~~	+	Ipomoelin, a jacalin-related lectin with a compact tetrameric association and versatile carbohydrate binding properties regulated by its N terminus.,Chang WC, Liu KL, Hsu FC, Jeng ST, Cheng YS PLoS One. 2012;7(7):e40618. Epub 2012 Jul 11. PMID:22808208<ref>PMID:22808208</ref>

-	~~===Structure analysis~~ of ~~a wound-inducible lectin ipomoelin from sweet potato===~~	+	From MEDLINEÂ®/PubMedÂ®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_22808208}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[3r51]] is a 2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Ipomoea_batatas Ipomoea batatas]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3R51 OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:022808208<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Ipomoea batatas]]		[[Category: Ipomoea batatas]]
	[[Category: Chang, W C.]]		[[Category: Chang, W C.]]

OCA at 05:03, 1 August 2012

OCA — Wed, 01 Aug 2012 05:03:35 GMT

←Older revision		Revision as of 05:03, 1 August 2012
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-	[[Image:3r51.~~jpg~~\|left\|200px]]	+	[[Image:3r51.png\|left\|200px]]

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-	-->
	{{STRUCTURE_3r51\| PDB=3r51 \| SCENE= }}		{{STRUCTURE_3r51\| PDB=3r51 \| SCENE= }}

	===Structure analysis of a wound-inducible lectin ipomoelin from sweet potato===		===Structure analysis of a wound-inducible lectin ipomoelin from sweet potato===

		+	{{ABSTRACT_PUBMED_22808208}}

	==About this Structure==		==About this Structure==
	[[3r51]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ipomoea_batatas Ipomoea batatas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R51 OCA].		[[3r51]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ipomoea_batatas Ipomoea batatas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R51 OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:022808208</ref><references group="xtra"/>
	[[Category: Ipomoea batatas]]		[[Category: Ipomoea batatas]]
	[[Category: Chang, W C.]]		[[Category: Chang, W C.]]

OCA at 07:48, 28 March 2012

OCA — Wed, 28 Mar 2012 07:48:54 GMT

←Older revision		Revision as of 07:48, 28 March 2012
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3r51.jpg\|left\|200px]]

-	The ~~entry 3r51~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3r51", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3r51\| PDB=3r51 \| SCENE= }}

-	~~Authors: Liu, K.L., Chang, W.C., Jeng, S.T., Cheng, Y.S.~~	+	===Structure analysis of a wound-inducible lectin ipomoelin from sweet potato===

-	~~Description:~~ Structure ~~analysis of~~ a ~~wound-inducible lectin ipomoelin~~ from ~~sweet potato~~	+
		+	==About this Structure==
		+	[[3r51]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ipomoea_batatas Ipomoea batatas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R51 OCA].
		+	[[Category: Ipomoea batatas]]
		+	[[Category: Chang, W C.]]
		+	[[Category: Cheng, Y S.]]
		+	[[Category: Jeng, S T.]]
		+	[[Category: Liu, K L.]]
		+	[[Category: Beta prism]]
		+	[[Category: Carbohydrate-binding protein]]
		+	[[Category: Carbohydrate/sugar binding]]

OCA at 05:12, 8 March 2012

OCA — Thu, 08 Mar 2012 05:12:40 GMT

←Older revision		Revision as of 05:12, 8 March 2012
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3r51 is ON HOLD	+	The entry 3r51 is ON HOLD until Paper Publication

	Authors: Liu, K.L., Chang, W.C., Jeng, S.T., Cheng, Y.S.		Authors: Liu, K.L., Chang, W.C., Jeng, S.T., Cheng, Y.S.

	Description: Structure analysis of a wound-inducible lectin ipomoelin from sweet potato		Description: Structure analysis of a wound-inducible lectin ipomoelin from sweet potato

OCA: Protected "3r51" [edit=sysop:move=sysop]

OCA — Wed, 23 Mar 2011 06:52:35 GMT

Protected "3r51" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:52, 23 March 2011

OCA: New page: '''Unreleased structure''' The entry 3r51 is ON HOLD Authors: Liu, K.L., Chang, W.C., Jeng, S.T., Cheng, Y.S. Description: Structure analysis of a wound-inducible lectin ipomoelin from...

OCA — Wed, 23 Mar 2011 06:52:34 GMT

New page: '''Unreleased structure''' The entry 3r51 is ON HOLD Authors: Liu, K.L., Chang, W.C., Jeng, S.T., Cheng, Y.S. Description: Structure analysis of a wound-inducible lectin ipomoelin from...

New page

'''Unreleased structure'''

The entry 3r51 is ON HOLD

Authors: Liu, K.L., Chang, W.C., Jeng, S.T., Cheng, Y.S.

Description: Structure analysis of a wound-inducible lectin ipomoelin from sweet potato