3rwo - Revision history

OCA at 12:39, 14 March 2024

OCA — Thu, 14 Mar 2024 12:39:26 GMT

←Older revision		Revision as of 12:39, 14 March 2024
Line 3:		Line 3:
	<StructureSection load='3rwo' size='340' side='right'caption='[[3rwo]], [[Resolution\|resolution]] 1.70Å' scene=''>		<StructureSection load='3rwo' size='340' side='right'caption='[[3rwo]], [[Resolution\|resolution]] 1.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3rwo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Baker's_yeast Baker's yeast~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RWO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RWO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3rwo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RWO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RWO FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=GDP:GUANOSINE~~-~~5-DIPHOSPHATE'>GDP</scene>~~, ~~<scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.7Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max~~-~~height: 3em;~~'>~~[[3rwm\|3rwm]]~~</~~div~~><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	~~<tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">YGL210W, YPT11, YPT32 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rwo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rwo OCA], [https://pdbe.org/3rwo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rwo RCSB], [https://www.ebi.ac.uk/pdbsum/3rwo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rwo ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rwo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rwo OCA], [https://pdbe.org/3rwo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rwo RCSB], [https://www.ebi.ac.uk/pdbsum/3rwo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rwo ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/YPT32_YEAST YPT32_YEAST]] Required for protein transport through the secretory pathway. Probably involved in regulation of secretory vesicle formation at the trans-Golgi compartment. Mediates the proper polarized localization of SEC2, a GEF for SEC4, but does not alter the exchange activity of SEC2 on SEC4. Plays a role in autophagy.<ref>PMID:12045183</ref> <ref>PMID:12478387</ref> <ref>PMID:23078654</ref> <ref>PMID:8978673</ref> <ref>PMID:9151665</ref>	+	[https://www.uniprot.org/uniprot/YPT32_YEAST YPT32_YEAST] Required for protein transport through the secretory pathway. Probably involved in regulation of secretory vesicle formation at the trans-Golgi compartment. Mediates the proper polarized localization of SEC2, a GEF for SEC4, but does not alter the exchange activity of SEC2 on SEC4. Plays a role in autophagy.<ref>PMID:12045183</ref> <ref>PMID:12478387</ref> <ref>PMID:23078654</ref> <ref>PMID:8978673</ref> <ref>PMID:9151665</ref>
-	~~<div style="background-color:#fffaf0;">~~	+
-	~~== Publication Abstract from PubMed ==~~	+
-	Rab GTPases localize to distinct sub-cellular compartments and regulate vesicle trafficking in eukaryotic cells. Yeast Rabs Ypt31/32 and Sec4 have 68% homology and bind to common interactors, yet play distinct roles in the transport of exocytic vesicles. The structures of Ypt31/32 have not previously been reported in the uncomplexed state. We describe the crystal structures of GTP and GDP forms of Ypt32 to understand the molecular basis for Rab function. The structure of Ypt32(GTP) reveals that the switch II conformation is distinct from Sec4(GTP) in spite of a highly conserved amino acid sequence. Also, Ypt32(GDP) reveals a remarkable change in conformation of the switch II helix induced by binding to GDI, which has not been described previously.	+
-		+
-	The activation cycle of Rab GTPase Ypt32 reveals structural determinants of effector recruitment and GDI binding.,Sultana A, Jin Y, Dregger C, Franklin E, Weisman LS, Khan AR FEBS Lett. 2011 Oct 20. PMID:22024479<ref>PMID:22024479</ref>	+
-		+
-	~~From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>~~	+
-	~~</div>~~	+
-	~~<div class="pdbe-citations 3rwo" style="background-color:#fffaf0;"></div~~>	+

	==See Also==		==See Also==
Line 27:		Line 17:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Baker's yeast]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Dregger, C]]	+	[[Category: Saccharomyces cerevisiae S288C]]
-	[[Category: Franklin, E]]	+	[[Category: Dregger C]]
-	[[Category: Jin, Y]]	+	[[Category: Franklin E]]
-	[[Category: Khan~~, A R~~]]	+	[[Category: Jin Y]]
-	[[Category: Sultana, A]]	+	[[Category: Khan AR]]
-	[[Category: Weisman~~, L S]]~~	+	[[Category: Sultana A]]
-	~~[[Category: Effector]]~~	+	[[Category: Weisman LS]]
-	~~[[Category: Exocytosis]]~~	+
-	~~[[Category: Gdp]]~~	+
-	~~[[Category: Golgi apparatus]]~~	+
-	~~[[Category: Gtp-binding]]~~	+
-	~~[[Category: Gtpase]]~~	+
-	~~[[Category: Lipoprotein]]~~	+
-	~~[[Category: Membrane]]~~	+
-	~~[[Category: Myo2p]]~~	+
-	~~[[Category: Nucleotide-binding]]~~	+
-	~~[[Category: Prenylation]]~~	+
-	~~[[Category: Protein transport]]~~	+
-	~~[[Category: Protein-gdp complex]]~~	+
-	~~[[Category: Rab gtpase]]~~	+
-	~~[[Category: Transport]]~~	+
-	~~[[Category: Vesicle trafficking]]~~	+
-	~~[[Category: Ypt32~~]]	+

OCA at 10:28, 22 June 2022

OCA — Wed, 22 Jun 2022 10:28:22 GMT

←Older revision		Revision as of 10:28, 22 June 2022
Line 1:		Line 1:

	==Crystal structure of YPT32 in complex with GDP==		==Crystal structure of YPT32 in complex with GDP==
-	<StructureSection load='3rwo' size='340' side='right' caption='[[3rwo]], [[Resolution\|resolution]] 1.70Å' scene=''>	+	<StructureSection load='3rwo' size='340' side='right'caption='[[3rwo]], [[Resolution\|resolution]] 1.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3rwo]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RWO OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3RWO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3rwo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RWO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RWO FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3rwm\|3rwm]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3rwm\|3rwm]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">YGL210W, YPT11, YPT32 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">YGL210W, YPT11, YPT32 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3rwo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rwo OCA], [~~http~~://pdbe.org/3rwo PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3rwo RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3rwo PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3rwo ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rwo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rwo OCA], [https://pdbe.org/3rwo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rwo RCSB], [https://www.ebi.ac.uk/pdbsum/3rwo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rwo ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/YPT32_YEAST YPT32_YEAST]] Required for protein transport through the secretory pathway. Probably involved in regulation of secretory vesicle formation at the trans-Golgi compartment. Mediates the proper polarized localization of SEC2, a GEF for SEC4, but does not alter the exchange activity of SEC2 on SEC4. Plays a role in autophagy.<ref>PMID:12045183</ref> <ref>PMID:12478387</ref> <ref>PMID:23078654</ref> <ref>PMID:8978673</ref> <ref>PMID:9151665</ref>	+	[[https://www.uniprot.org/uniprot/YPT32_YEAST YPT32_YEAST]] Required for protein transport through the secretory pathway. Probably involved in regulation of secretory vesicle formation at the trans-Golgi compartment. Mediates the proper polarized localization of SEC2, a GEF for SEC4, but does not alter the exchange activity of SEC2 on SEC4. Plays a role in autophagy.<ref>PMID:12045183</ref> <ref>PMID:12478387</ref> <ref>PMID:23078654</ref> <ref>PMID:8978673</ref> <ref>PMID:9151665</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 22:		Line 22:

	==See Also==		==See Also==
-	*[[GTP-binding protein\|GTP-binding protein]]	+	*[[GTP-binding protein 3D structures\|GTP-binding protein 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 28:		Line 28:
	</StructureSection>		</StructureSection>
	[[Category: Baker's yeast]]		[[Category: Baker's yeast]]
		+	[[Category: Large Structures]]
	[[Category: Dregger, C]]		[[Category: Dregger, C]]
	[[Category: Franklin, E]]		[[Category: Franklin, E]]

OCA at 11:18, 10 December 2016

OCA — Sat, 10 Dec 2016 11:18:01 GMT

←Older revision		Revision as of 11:18, 10 December 2016
Line 1:		Line 1:
		+
	==Crystal structure of YPT32 in complex with GDP==		==Crystal structure of YPT32 in complex with GDP==
	<StructureSection load='3rwo' size='340' side='right' caption='[[3rwo]], [[Resolution\|resolution]] 1.70Å' scene=''>		<StructureSection load='3rwo' size='340' side='right' caption='[[3rwo]], [[Resolution\|resolution]] 1.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3rwo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Saccharomyces_cerevisiae Saccharomyces cerevisiae~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RWO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3RWO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3rwo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RWO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3RWO FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3rwm\|3rwm]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3rwm\|3rwm]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">YGL210W, YPT11, YPT32 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~4932 Saccharomyces cerevisiae~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">YGL210W, YPT11, YPT32 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3rwo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rwo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3rwo RCSB], [http://www.ebi.ac.uk/pdbsum/3rwo PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3rwo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rwo OCA], [http://pdbe.org/3rwo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3rwo RCSB], [http://www.ebi.ac.uk/pdbsum/3rwo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3rwo ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/YPT32_YEAST YPT32_YEAST]] Required for protein transport through the secretory pathway. Probably involved in regulation of secretory vesicle formation at the trans-Golgi compartment. Mediates the proper polarized localization of SEC2, a GEF for SEC4, but does not alter the exchange activity of SEC2 on SEC4. Plays a role in autophagy.<ref>PMID:12045183</ref> <ref>PMID:12478387</ref> <ref>PMID:23078654</ref> <ref>PMID:8978673</ref> <ref>PMID:9151665</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 16:		Line 19:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3rwo" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 23:		Line 27:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Saccharomyces cerevisiae~~]]	+	[[Category: Baker's yeast]]
	[[Category: Dregger, C]]		[[Category: Dregger, C]]
	[[Category: Franklin, E]]		[[Category: Franklin, E]]

OCA at 10:43, 9 December 2014

OCA — Tue, 09 Dec 2014 10:43:41 GMT

←Older revision		Revision as of 10:43, 9 December 2014
Line 1:		Line 1:
-	[[~~Image:~~3rwo.~~png~~\|~~left~~\|~~200px~~]]	+	==Crystal structure of YPT32 in complex with GDP==
		+	<StructureSection load='3rwo' size='340' side='right' caption='[[3rwo]], [[Resolution\|resolution]] 1.70Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3rwo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RWO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3RWO FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3rwm\|3rwm]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">YGL210W, YPT11, YPT32 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3rwo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rwo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3rwo RCSB], [http://www.ebi.ac.uk/pdbsum/3rwo PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Rab GTPases localize to distinct sub-cellular compartments and regulate vesicle trafficking in eukaryotic cells. Yeast Rabs Ypt31/32 and Sec4 have 68% homology and bind to common interactors, yet play distinct roles in the transport of exocytic vesicles. The structures of Ypt31/32 have not previously been reported in the uncomplexed state. We describe the crystal structures of GTP and GDP forms of Ypt32 to understand the molecular basis for Rab function. The structure of Ypt32(GTP) reveals that the switch II conformation is distinct from Sec4(GTP) in spite of a highly conserved amino acid sequence. Also, Ypt32(GDP) reveals a remarkable change in conformation of the switch II helix induced by binding to GDI, which has not been described previously.

-	~~{{STRUCTURE_3rwo\| PDB=3rwo \| SCENE= }}~~	+	The activation cycle of Rab GTPase Ypt32 reveals structural determinants of effector recruitment and GDI binding.,Sultana A, Jin Y, Dregger C, Franklin E, Weisman LS, Khan AR FEBS Lett. 2011 Oct 20. PMID:22024479<ref>PMID:22024479</ref>

-	~~===Crystal structure~~ of ~~YPT32 in complex with GDP===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_22024479}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[3rwo]] is a 2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3RWO OCA].~~	+

	==See Also==		==See Also==
	*[[GTP-binding protein\|GTP-binding protein]]		*[[GTP-binding protein\|GTP-binding protein]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:022024479<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Saccharomyces cerevisiae]]		[[Category: Saccharomyces cerevisiae]]
-	[[Category: Dregger, C.]]	+	[[Category: Dregger, C]]
-	[[Category: Franklin, E.]]	+	[[Category: Franklin, E]]
-	[[Category: Jin, Y.]]	+	[[Category: Jin, Y]]
-	[[Category: Khan, A R.]]	+	[[Category: Khan, A R]]
-	[[Category: Sultana, A.]]	+	[[Category: Sultana, A]]
-	[[Category: Weisman, L S.]]	+	[[Category: Weisman, L S]]
	[[Category: Effector]]		[[Category: Effector]]
	[[Category: Exocytosis]]		[[Category: Exocytosis]]

OCA at 22:05, 20 October 2012

OCA — Sat, 20 Oct 2012 22:05:46 GMT

←Older revision		Revision as of 22:05, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[3rwo]] is a 2 chain structure ~~of [[GTP-binding protein]]~~ with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RWO OCA].	+	[[3rwo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RWO OCA].

	==See Also==		==See Also==

OCA at 15:14, 27 July 2012

OCA — Fri, 27 Jul 2012 15:14:13 GMT

←Older revision		Revision as of 15:14, 27 July 2012
Line 1:		Line 1:
	[[Image:3rwo.png\|left\|200px]]		[[Image:3rwo.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3rwo", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3rwo\| PDB=3rwo \| SCENE= }}		{{STRUCTURE_3rwo\| PDB=3rwo \| SCENE= }}

	===Crystal structure of YPT32 in complex with GDP===		===Crystal structure of YPT32 in complex with GDP===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_22024479}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 22024479 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_22024479}}		{{ABSTRACT_PUBMED_22024479}}

Line 22:		Line 11:

	==See Also==		==See Also==
-	*[[GTP-binding protein]]	+	*[[GTP-binding protein\|GTP-binding protein]]

	==Reference==		==Reference==

OCA at 10:42, 14 December 2011

OCA — Wed, 14 Dec 2011 10:42:13 GMT

←Older revision		Revision as of 10:42, 14 December 2011
Line 19:		Line 19:

	==About this Structure==		==About this Structure==
-	[[3rwo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RWO OCA].	+	[[3rwo]] is a 2 chain structure of [[GTP-binding protein]] with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RWO OCA].
		+
		+	==See Also==
		+	*[[GTP-binding protein]]

	==Reference==		==Reference==

OCA at 10:51, 9 November 2011

OCA — Wed, 09 Nov 2011 10:51:33 GMT

←Older revision		Revision as of 10:51, 9 November 2011
Line 11:		Line 11:
	===Crystal structure of YPT32 in complex with GDP===		===Crystal structure of YPT32 in complex with GDP===

		+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_22024479}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 22024479 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_22024479}}

	==About this Structure==		==About this Structure==
	[[3rwo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RWO OCA].		[[3rwo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RWO OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:022024479</ref><references group="xtra"/>
	[[Category: Saccharomyces cerevisiae]]		[[Category: Saccharomyces cerevisiae]]
	[[Category: Dregger, C.]]		[[Category: Dregger, C.]]

OCA at 11:23, 30 October 2011

OCA — Sun, 30 Oct 2011 11:23:09 GMT

←Older revision		Revision as of 11:23, 30 October 2011
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3rwo.png\|left\|200px]]

-	The ~~entry 3rwo~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3rwo", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3rwo\| PDB=3rwo \| SCENE= }}

-	~~Authors: Sultana, A., Jin, Y., Dregger, C., Franklin, E., Weisman, L.S., Khan, A.R.~~	+	===Crystal structure of YPT32 in complex with GDP===

-	~~Description: Crystal~~ structure ~~of YPT32 in complex~~ with ~~GDP~~	+
		+	==About this Structure==
		+	[[3rwo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RWO OCA].
		+	[[Category: Saccharomyces cerevisiae]]
		+	[[Category: Dregger, C.]]
		+	[[Category: Franklin, E.]]
		+	[[Category: Jin, Y.]]
		+	[[Category: Khan, A R.]]
		+	[[Category: Sultana, A.]]
		+	[[Category: Weisman, L S.]]
		+	[[Category: Effector]]
		+	[[Category: Exocytosis]]
		+	[[Category: Gdp]]
		+	[[Category: Golgi apparatus]]
		+	[[Category: Gtp-binding]]
		+	[[Category: Gtpase]]
		+	[[Category: Lipoprotein]]
		+	[[Category: Membrane]]
		+	[[Category: Myo2p]]
		+	[[Category: Nucleotide-binding]]
		+	[[Category: Prenylation]]
		+	[[Category: Protein transport]]
		+	[[Category: Protein-gdp complex]]
		+	[[Category: Rab gtpase]]
		+	[[Category: Transport]]
		+	[[Category: Vesicle trafficking]]
		+	[[Category: Ypt32]]

OCA at 05:10, 25 May 2011

OCA — Wed, 25 May 2011 05:10:42 GMT

←Older revision		Revision as of 05:10, 25 May 2011
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3rwo is ON HOLD	+	The entry 3rwo is ON HOLD until Paper Publication

	Authors: Sultana, A., Jin, Y., Dregger, C., Franklin, E., Weisman, L.S., Khan, A.R.		Authors: Sultana, A., Jin, Y., Dregger, C., Franklin, E., Weisman, L.S., Khan, A.R.

-	Description: ~~CRYSTAL STRUCTURE OF~~ YPT32 ~~IN COMPLEX WITH~~ GDP	+	Description: Crystal structure of YPT32 in complex with GDP