3sbn - Revision history

OCA at 09:04, 15 November 2023

OCA — Wed, 15 Nov 2023 09:04:43 GMT

←Older revision		Revision as of 09:04, 15 November 2023
Line 3:		Line 3:
	<StructureSection load='3sbn' size='340' side='right'caption='[[3sbn]], [[Resolution\|resolution]] 0.90Å' scene=''>		<StructureSection load='3sbn' size='340' side='right'caption='[[3sbn]], [[Resolution\|resolution]] 0.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3sbn]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Hypocrea_rufa Hypocrea rufa~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SBN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SBN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3sbn]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichoderma_viride Trichoderma viride]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SBN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SBN FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=CCN:ACETONITRILE'>CCN</scene>~~, ~~<scene name='pdbligand=MOH:METHANOL'>MOH</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 0.9Å</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=AIB:ALPHA-AMINOISOBUTYRIC+ACID'>AIB</scene>, <scene name='pdbligand=DCL:2-AMINO-4-METHYL-PENTAN-1-OL'>DCL</scene></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=AIB:ALPHA-AMINOISOBUTYRIC+ACID'>AIB</scene>, <scene name='pdbligand=CCN:ACETONITRILE'>CCN</scene>, <scene name='pdbligand=DCL:2-AMINO-4-METHYL-PENTAN-1-OL'>DCL</scene>, <scene name='pdbligand=MOH:METHANOL'>MOH</scene>, <scene name='pdbligand=PRD_000828:Trichovirin+I-4A'>PRD_000828</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sbn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sbn OCA], [https://pdbe.org/3sbn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sbn RCSB], [https://www.ebi.ac.uk/pdbsum/3sbn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sbn ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sbn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sbn OCA], [https://pdbe.org/3sbn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sbn RCSB], [https://www.ebi.ac.uk/pdbsum/3sbn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sbn ProSAT]</span></td></tr>
	</table>		</table>
Line 21:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Hypocrea rufa]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Axford, D~~]]	+	[[Category: Trichoderma viride]]
-	[[Category: ~~Gessmann, R~~]]	+	[[Category: Axford D]]
-	[[Category: ~~Petratos, K~~]]	+	[[Category: Gessmann R]]
-	[[Category: ~~3-10 helix]]~~	+	[[Category: Petratos K]]
-	~~[[Category: Antibiotic]]~~	+
-	~~[[Category: Curved 310-helix]]~~	+
-	~~[[Category: Peptide antibiotic~~]]	+

OCA at 07:50, 29 June 2022

OCA — Wed, 29 Jun 2022 07:50:06 GMT

←Older revision		Revision as of 07:50, 29 June 2022
Line 1:		Line 1:

	==trichovirin I-4A in polar environment at 0.9 Angstroem==		==trichovirin I-4A in polar environment at 0.9 Angstroem==
-	<StructureSection load='3sbn' size='340' side='right' caption='[[3sbn]], [[Resolution\|resolution]] 0.90Å' scene=''>	+	<StructureSection load='3sbn' size='340' side='right'caption='[[3sbn]], [[Resolution\|resolution]] 0.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3sbn]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Hypocrea_rufa Hypocrea rufa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SBN OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3SBN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3sbn]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Hypocrea_rufa Hypocrea rufa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SBN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SBN FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CCN:ACETONITRILE'>CCN</scene>, <scene name='pdbligand=MOH:METHANOL'>MOH</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CCN:ACETONITRILE'>CCN</scene>, <scene name='pdbligand=MOH:METHANOL'>MOH</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=AIB:ALPHA-AMINOISOBUTYRIC+ACID'>AIB</scene>, <scene name='pdbligand=DCL:2-AMINO-4-METHYL-PENTAN-1-OL'>DCL</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=AIB:ALPHA-AMINOISOBUTYRIC+ACID'>AIB</scene>, <scene name='pdbligand=DCL:2-AMINO-4-METHYL-PENTAN-1-OL'>DCL</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3sbn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sbn OCA], [~~http~~://pdbe.org/3sbn PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3sbn RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3sbn PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3sbn ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sbn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sbn OCA], [https://pdbe.org/3sbn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sbn RCSB], [https://www.ebi.ac.uk/pdbsum/3sbn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sbn ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 22:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Hypocrea rufa]]		[[Category: Hypocrea rufa]]
		+	[[Category: Large Structures]]
	[[Category: Axford, D]]		[[Category: Axford, D]]
	[[Category: Gessmann, R]]		[[Category: Gessmann, R]]

OCA at 10:46, 13 February 2019

OCA — Wed, 13 Feb 2019 10:46:54 GMT

←Older revision		Revision as of 10:46, 13 February 2019
Line 3:		Line 3:
	<StructureSection load='3sbn' size='340' side='right' caption='[[3sbn]], [[Resolution\|resolution]] 0.90Å' scene=''>		<StructureSection load='3sbn' size='340' side='right' caption='[[3sbn]], [[Resolution\|resolution]] 0.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3sbn]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Trichoderma_viride Trichoderma viride~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SBN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SBN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3sbn]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Hypocrea_rufa Hypocrea rufa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SBN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SBN FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CCN:ACETONITRILE'>CCN</scene>, <scene name='pdbligand=MOH:METHANOL'>MOH</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CCN:ACETONITRILE'>CCN</scene>, <scene name='pdbligand=MOH:METHANOL'>MOH</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=AIB:ALPHA-AMINOISOBUTYRIC+ACID'>AIB</scene>, <scene name='pdbligand=DCL:2-AMINO-4-METHYL-PENTAN-1-OL'>DCL</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=AIB:ALPHA-AMINOISOBUTYRIC+ACID'>AIB</scene>, <scene name='pdbligand=DCL:2-AMINO-4-METHYL-PENTAN-1-OL'>DCL</scene></td></tr>
Line 21:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Trichoderma viride~~]]	+	[[Category: Hypocrea rufa]]
	[[Category: Axford, D]]		[[Category: Axford, D]]
	[[Category: Gessmann, R]]		[[Category: Gessmann, R]]

OCA at 10:30, 11 August 2016

OCA — Thu, 11 Aug 2016 10:30:50 GMT

←Older revision		Revision as of 10:30, 11 August 2016
Line 1:		Line 1:
		+
	==trichovirin I-4A in polar environment at 0.9 Angstroem==		==trichovirin I-4A in polar environment at 0.9 Angstroem==
	<StructureSection load='3sbn' size='340' side='right' caption='[[3sbn]], [[Resolution\|resolution]] 0.90Å' scene=''>		<StructureSection load='3sbn' size='340' side='right' caption='[[3sbn]], [[Resolution\|resolution]] 0.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3sbn]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Hypocrea_rufa Hypocrea rufa~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SBN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SBN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3sbn]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trichoderma_viride Trichoderma viride]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SBN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SBN FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CCN:ACETONITRILE'>CCN</scene>, <scene name='pdbligand=MOH:METHANOL'>MOH</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CCN:ACETONITRILE'>CCN</scene>, <scene name='pdbligand=MOH:METHANOL'>MOH</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=AIB:ALPHA-AMINOISOBUTYRIC+ACID'>AIB</scene>, <scene name='pdbligand=DCL:2-AMINO-4-METHYL-PENTAN-1-OL'>DCL</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=AIB:ALPHA-AMINOISOBUTYRIC+ACID'>AIB</scene>, <scene name='pdbligand=DCL:2-AMINO-4-METHYL-PENTAN-1-OL'>DCL</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3sbn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sbn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3sbn RCSB], [http://www.ebi.ac.uk/pdbsum/3sbn PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3sbn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sbn OCA], [http://pdbe.org/3sbn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3sbn RCSB], [http://www.ebi.ac.uk/pdbsum/3sbn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3sbn ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 15:		Line 16:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3sbn" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Hypocrea rufa~~]]	+	[[Category: Trichoderma viride]]
	[[Category: Axford, D]]		[[Category: Axford, D]]
	[[Category: Gessmann, R]]		[[Category: Gessmann, R]]

OCA at 10:58, 4 January 2015

OCA — Sun, 04 Jan 2015 10:58:25 GMT

←Older revision		Revision as of 10:58, 4 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3sbn]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Hypocrea_rufa Hypocrea rufa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SBN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SBN FirstGlance]. <br>		<table><tr><td colspan='2'>[[3sbn]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Hypocrea_rufa Hypocrea rufa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SBN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SBN FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CCN:ACETONITRILE'>CCN</scene>, <scene name='pdbligand=MOH:METHANOL'>MOH</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CCN:ACETONITRILE'>CCN</scene>, <scene name='pdbligand=MOH:METHANOL'>MOH</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=AIB:ALPHA-AMINOISOBUTYRIC+ACID'>AIB</scene>, <scene name='pdbligand=DCL:2-AMINO-4-METHYL-PENTAN-1-OL'>DCL</scene></td></tr>	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=AIB:ALPHA-AMINOISOBUTYRIC+ACID'>AIB</scene>, <scene name='pdbligand=DCL:2-AMINO-4-METHYL-PENTAN-1-OL'>DCL</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3sbn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sbn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3sbn RCSB], [http://www.ebi.ac.uk/pdbsum/3sbn PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3sbn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sbn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3sbn RCSB], [http://www.ebi.ac.uk/pdbsum/3sbn PDBsum]</span></td></tr>
-	<table>	+	</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 13:		Line 13:
	Four complete turns of a curved 3(10)-helix at atomic resolution: the crystal structure of the peptaibol trichovirin I-4A in a polar environment suggests a transition to alpha-helix for membrane function.,Gessmann R, Axford D, Owen RL, Bruckner H, Petratos K Acta Crystallogr D Biol Crystallogr. 2012 Feb;68(Pt 2):109-16. Epub 2012, Jan 6. PMID:22281739<ref>PMID:22281739</ref>		Four complete turns of a curved 3(10)-helix at atomic resolution: the crystal structure of the peptaibol trichovirin I-4A in a polar environment suggests a transition to alpha-helix for membrane function.,Gessmann R, Axford D, Owen RL, Bruckner H, Petratos K Acta Crystallogr D Biol Crystallogr. 2012 Feb;68(Pt 2):109-16. Epub 2012, Jan 6. PMID:22281739<ref>PMID:22281739</ref>

-	From ~~MEDLINEÂ®~~/~~PubMedÂ®~~, a database of the U.S. National Library of Medicine.<br>	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
	== References ==		== References ==
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Hypocrea rufa]]		[[Category: Hypocrea rufa]]
-	[[Category: Axford, D.]]	+	[[Category: Axford, D]]
-	[[Category: Gessmann, R.]]	+	[[Category: Gessmann, R]]
-	[[Category: Petratos, K.]]	+	[[Category: Petratos, K]]
	[[Category: 3-10 helix]]		[[Category: 3-10 helix]]
	[[Category: Antibiotic]]		[[Category: Antibiotic]]
	[[Category: Curved 310-helix]]		[[Category: Curved 310-helix]]
	[[Category: Peptide antibiotic]]		[[Category: Peptide antibiotic]]

OCA at 05:25, 5 June 2014

OCA — Thu, 05 Jun 2014 05:25:49 GMT

←Older revision		Revision as of 05:25, 5 June 2014
Line 1:		Line 1:
-	[[~~Image:~~3sbn.~~png~~\|~~left~~\|~~200px~~]]	+	==trichovirin I-4A in polar environment at 0.9 Angstroem==
		+	<StructureSection load='3sbn' size='340' side='right' caption='[[3sbn]], [[Resolution\|resolution]] 0.90Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3sbn]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Hypocrea_rufa Hypocrea rufa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SBN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SBN FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CCN:ACETONITRILE'>CCN</scene>, <scene name='pdbligand=MOH:METHANOL'>MOH</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=AIB:ALPHA-AMINOISOBUTYRIC+ACID'>AIB</scene>, <scene name='pdbligand=DCL:2-AMINO-4-METHYL-PENTAN-1-OL'>DCL</scene></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3sbn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sbn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3sbn RCSB], [http://www.ebi.ac.uk/pdbsum/3sbn PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The first crystal structure of a member of peptaibol antibiotic subfamily 4, trichovirin I-4A (14 residues), has been determined by direct methods and refined at atomic resolution. The monoclinic unit cell has two molecules in the asymmetric unit. Both molecules assume a 3(10) right-handed helical conformation and are significantly bent. The molecules pack loosely along the crystallographic twofold axis, forming two large tunnels between symmetry-related molecules in which no ordered solvent could be located. Carbonyl O atoms which are not involved in intramolecular hydrogen bonding participate in close van der Waals interactions with apolar groups. The necessary amphipathicity for biological activity of peptaibols is not realised in the crystal structure. Hence, a structural change of trichovirin to an alpha-helical conformation is proposed for membrane integration and efficient water/ion transportation across the lipid bilayer.

-	~~{{STRUCTURE_3sbn\| PDB=3sbn \| SCENE= }}~~	+	Four complete turns of a curved 3(10)-helix at atomic resolution: the crystal structure of the peptaibol trichovirin I-4A in a polar environment suggests a transition to alpha-helix for membrane function.,Gessmann R, Axford D, Owen RL, Bruckner H, Petratos K Acta Crystallogr D Biol Crystallogr. 2012 Feb;68(Pt 2):109-16. Epub 2012, Jan 6. PMID:22281739<ref>PMID:22281739</ref>

-	~~===trichovirin I-4A in polar environment at 0.9 Angstroem===~~	+	From MEDLINEÂ®/PubMedÂ®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_22281739}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[3sbn]] is~~ a ~~2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Hypocrea_rufa Hypocrea rufa]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3SBN OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:022281739<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Hypocrea rufa]]		[[Category: Hypocrea rufa]]
	[[Category: Axford, D.]]		[[Category: Axford, D.]]

OCA at 07:25, 11 July 2012

OCA — Wed, 11 Jul 2012 07:25:01 GMT

←Older revision		Revision as of 07:25, 11 July 2012
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	[[Image:3sbn.png\|left\|200px]]		[[Image:3sbn.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3sbn", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3sbn\| PDB=3sbn \| SCENE= }}		{{STRUCTURE_3sbn\| PDB=3sbn \| SCENE= }}

	===trichovirin I-4A in polar environment at 0.9 Angstroem===		===trichovirin I-4A in polar environment at 0.9 Angstroem===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_22281739}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 22281739 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_22281739}}		{{ABSTRACT_PUBMED_22281739}}

OCA at 05:48, 15 February 2012

OCA — Wed, 15 Feb 2012 05:48:19 GMT

←Older revision		Revision as of 05:48, 15 February 2012
Line 1:		Line 1:
-	[[Image:3sbn.~~jpg~~\|left\|200px]]	+	[[Image:3sbn.png\|left\|200px]]

	<!--		<!--
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	===trichovirin I-4A in polar environment at 0.9 Angstroem===		===trichovirin I-4A in polar environment at 0.9 Angstroem===

		+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_22281739}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 22281739 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_22281739}}

	==About this Structure==		==About this Structure==
	[[3sbn]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Hypocrea_rufa Hypocrea rufa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SBN OCA].		[[3sbn]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Hypocrea_rufa Hypocrea rufa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SBN OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:022281739</ref><references group="xtra"/>
	[[Category: Hypocrea rufa]]		[[Category: Hypocrea rufa]]
	[[Category: Axford, D.]]		[[Category: Axford, D.]]

OCA at 07:39, 28 December 2011

OCA — Wed, 28 Dec 2011 07:39:07 GMT

←Older revision		Revision as of 07:39, 28 December 2011
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-	~~'''Unreleased structure'''~~	+	[[Image:3sbn.jpg\|left\|200px]]

-	The ~~entry 3sbn~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3sbn", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3sbn\| PDB=3sbn \| SCENE= }}

-	~~Authors: Gessmann, R., Axford, D., Petratos, K~~.	+	===trichovirin I-4A in polar environment at 0.9 Angstroem===

-	~~Description~~: ~~trichovirin I~~-~~4A in polar environment at 0~~.~~9 Angstroem~~	+
		+	==About this Structure==
		+	[[3sbn]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Hypocrea_rufa Hypocrea rufa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SBN OCA].
		+	[[Category: Hypocrea rufa]]
		+	[[Category: Axford, D.]]
		+	[[Category: Gessmann, R.]]
		+	[[Category: Petratos, K.]]
		+	[[Category: 3-10 helix]]
		+	[[Category: Antibiotic]]
		+	[[Category: Curved 310-helix]]
		+	[[Category: Peptide antibiotic]]

OCA at 06:04, 5 October 2011

OCA — Wed, 05 Oct 2011 06:04:29 GMT

←Older revision		Revision as of 06:04, 5 October 2011
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3sbn is ON HOLD	+	The entry 3sbn is ON HOLD until Paper Publication

	Authors: Gessmann, R., Axford, D., Petratos, K.		Authors: Gessmann, R., Axford, D., Petratos, K.

-	Description: trichovirin I-4A in polar ~~enviroment~~ at 0.9 Angstroem	+	Description: trichovirin I-4A in polar environment at 0.9 Angstroem