3sy6 - Revision history

OCA at 11:51, 1 February 2023

OCA — Wed, 01 Feb 2023 11:51:03 GMT

←Older revision		Revision as of 11:51, 1 February 2023
Line 3:		Line 3:
	<StructureSection load='3sy6' size='340' side='right'caption='[[3sy6]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='3sy6' size='340' side='right'caption='[[3sy6]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3sy6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Bacfn Bacfn~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SY6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SY6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3sy6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_fragilis_NCTC_9343 Bacteroides fragilis NCTC 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SY6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SY6 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene></td></tr>
-	~~<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>~~	+
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BF1861 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272559 BACFN])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sy6 OCA], [https://pdbe.org/3sy6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sy6 RCSB], [https://www.ebi.ac.uk/pdbsum/3sy6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sy6 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sy6 OCA], [https://pdbe.org/3sy6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sy6 RCSB], [https://www.ebi.ac.uk/pdbsum/3sy6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sy6 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q5LE92_BACFN Q5LE92_BACFN]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 22:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacfn~~]]	+	[[Category: Bacteroides fragilis NCTC 9343]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Structural genomic]]
-	[[Category: Adhesion]]
-	[[Category: Cell adhesion]]
-	[[Category: Fimbrial protein]]
-	[[Category: Jcsg]]
-	[[Category: PSI, Protein structure initiative]]
-	[[Category: Psi-biology]]

OCA at 08:15, 29 June 2022

OCA — Wed, 29 Jun 2022 08:15:41 GMT

←Older revision		Revision as of 08:15, 29 June 2022
Line 3:		Line 3:
	<StructureSection load='3sy6' size='340' side='right'caption='[[3sy6]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='3sy6' size='340' side='right'caption='[[3sy6]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3sy6]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Bacfn Bacfn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SY6 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=3SY6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3sy6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacfn Bacfn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SY6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SY6 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BF1861 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272559 BACFN])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BF1861 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272559 BACFN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=3sy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sy6 OCA], [~~http~~://pdbe.org/3sy6 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3sy6 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3sy6 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3sy6 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sy6 OCA], [https://pdbe.org/3sy6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sy6 RCSB], [https://www.ebi.ac.uk/pdbsum/3sy6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sy6 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 05:52, 22 April 2020

OCA — Wed, 22 Apr 2020 05:52:12 GMT

←Older revision		Revision as of 05:52, 22 April 2020
Line 1:		Line 1:

	==Crystal structure of a fimbrial protein BF1861 [Bacteroides fragilis NCTC 9343] (BF1861) from Bacteroides fragilis NCTC 9343 at 1.90 A resolution==		==Crystal structure of a fimbrial protein BF1861 [Bacteroides fragilis NCTC 9343] (BF1861) from Bacteroides fragilis NCTC 9343 at 1.90 A resolution==
-	<StructureSection load='3sy6' size='340' side='right' caption='[[3sy6]], [[Resolution\|resolution]] 1.90Å' scene=''>	+	<StructureSection load='3sy6' size='340' side='right'caption='[[3sy6]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3sy6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacfn Bacfn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SY6 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3SY6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3sy6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacfn Bacfn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SY6 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3SY6 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BF1861 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272559 BACFN])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BF1861 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272559 BACFN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3sy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sy6 OCA], [http://pdbe.org/3sy6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3sy6 RCSB], [http://www.ebi.ac.uk/pdbsum/3sy6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3sy6 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3sy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sy6 OCA], [http://pdbe.org/3sy6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3sy6 RCSB], [http://www.ebi.ac.uk/pdbsum/3sy6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3sy6 ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Pili are proteinaceous polymers of linked pilins that protrude from the cell surface of many bacteria and often mediate adherence and virulence. We investigated a set of 20 Bacteroidia pilins from the human microbiome whose structures and mechanism of assembly were unknown. Crystal structures and biochemical data revealed a diverse protein superfamily with a common Greek-key beta sandwich fold with two transthyretin-like repeats that polymerize into a pilus through a strand-exchange mechanism. The assembly mechanism of the central, structural pilins involves proteinase-assisted removal of their N-terminal beta strand, creating an extended hydrophobic groove that binds the C-terminal donor strands of the incoming pilin. Accessory pilins at the tip and base have unique structural features specific to their location, allowing initiation or termination of the assembly. The Bacteroidia pilus, therefore, has a biogenesis mechanism that is distinct from other known pili and likely represents a different type of bacterial pilus.
		+
		+	A Distinct Type of Pilus from the Human Microbiome.,Xu Q, Shoji M, Shibata S, Naito M, Sato K, Elsliger MA, Grant JC, Axelrod HL, Chiu HJ, Farr CL, Jaroszewski L, Knuth MW, Deacon AM, Godzik A, Lesley SA, Curtis MA, Nakayama K, Wilson IA Cell. 2016 Apr 21;165(3):690-703. doi: 10.1016/j.cell.2016.03.016. Epub 2016 Apr , 7. PMID:27062925<ref>PMID:27062925</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 3sy6" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Bacfn]]		[[Category: Bacfn]]
		+	[[Category: Large Structures]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Adhesion]]		[[Category: Adhesion]]

OCA at 09:08, 11 August 2016

OCA — Thu, 11 Aug 2016 09:08:44 GMT

←Older revision		Revision as of 09:08, 11 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of a fimbrial protein BF1861 [Bacteroides fragilis NCTC 9343] (BF1861) from Bacteroides fragilis NCTC 9343 at 1.90 A resolution==		==Crystal structure of a fimbrial protein BF1861 [Bacteroides fragilis NCTC 9343] (BF1861) from Bacteroides fragilis NCTC 9343 at 1.90 A resolution==
	<StructureSection load='3sy6' size='340' side='right' caption='[[3sy6]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='3sy6' size='340' side='right' caption='[[3sy6]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3sy6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacteroides_fragilis Bacteroides fragilis~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SY6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SY6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3sy6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacfn Bacfn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SY6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SY6 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BF1861 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~817 Bacteroides fragilis~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BF1861 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272559 BACFN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3sy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sy6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3sy6 RCSB], [http://www.ebi.ac.uk/pdbsum/3sy6 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3sy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sy6 OCA], [http://pdbe.org/3sy6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3sy6 RCSB], [http://www.ebi.ac.uk/pdbsum/3sy6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3sy6 ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacteroides fragilis~~]]	+	[[Category: Bacfn]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Adhesion]]		[[Category: Adhesion]]

OCA at 09:23, 4 January 2015

OCA — Sun, 04 Jan 2015 09:23:39 GMT

←Older revision		Revision as of 09:23, 4 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3sy6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis Bacteroides fragilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SY6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SY6 FirstGlance]. <br>		<table><tr><td colspan='2'>[[3sy6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis Bacteroides fragilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SY6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SY6 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BF1861 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=817 Bacteroides fragilis])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BF1861 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=817 Bacteroides fragilis])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3sy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sy6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3sy6 RCSB], [http://www.ebi.ac.uk/pdbsum/3sy6 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3sy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sy6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3sy6 RCSB], [http://www.ebi.ac.uk/pdbsum/3sy6 PDBsum]</span></td></tr>
-	<table>	+	</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Bacteroides fragilis]]		[[Category: Bacteroides fragilis]]
-	[[Category: ~~JCSG, Joint Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
	[[Category: Adhesion]]		[[Category: Adhesion]]
	[[Category: Cell adhesion]]		[[Category: Cell adhesion]]
	[[Category: Fimbrial protein]]		[[Category: Fimbrial protein]]
	[[Category: Jcsg]]		[[Category: Jcsg]]
-	[[Category: ~~Joint center for structural genomic]]~~	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category:~~ Protein structure initiative]]	+
	[[Category: Psi-biology]]		[[Category: Psi-biology]]
-	[[Category: Structural genomic]]

OCA at 05:23, 5 June 2014

OCA — Thu, 05 Jun 2014 05:23:36 GMT

←Older revision		Revision as of 05:23, 5 June 2014
Line 1:		Line 1:
-	~~[[Image:3sy6.jpg\|left\|200px]]~~	+	==Crystal structure of a fimbrial protein BF1861 [Bacteroides fragilis NCTC 9343] (BF1861) from Bacteroides fragilis NCTC 9343 at 1.90 A resolution==
-		+	<StructureSection load='3sy6' size='340' side='right' caption='[[3sy6]], [[Resolution\|resolution]] 1.90Å' scene=''>
-	~~<!--~~	+	== Structural highlights ==
-	~~The line below this paragraph, containing "STRUCTURE_3sy6", creates the "Structure Box" on the page.~~	+	<table><tr><td colspan='2'>[[3sy6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis Bacteroides fragilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SY6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SY6 FirstGlance]. <br>
-	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene><br>
-	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~	+	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	~~or leave the SCENE parameter empty for the default display.~~	+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BF1861 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=817 Bacteroides fragilis])</td></tr>
-	~~-->~~	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3sy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sy6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3sy6 RCSB], [http://www.ebi.ac.uk/pdbsum/3sy6 PDBsum]</span></td></tr>
-	~~{{STRUCTURE_3sy6\| PDB=3sy6 \| SCENE= }}~~	+	<table>
-		+	__TOC__
-	===Crystal structure of a fimbrial protein BF1861 [Bacteroides fragilis NCTC 9343] (BF1861) from Bacteroides fragilis NCTC 9343 at 1.90 A resolution===	+	</StructureSection>
-		+
-		+
-	==~~About this Structure~~==	+
-	[[3sy6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis Bacteroides fragilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SY6 OCA].	+
	[[Category: Bacteroides fragilis]]		[[Category: Bacteroides fragilis]]
	[[Category: JCSG, Joint Center for Structural Genomics.]]		[[Category: JCSG, Joint Center for Structural Genomics.]]

OCA at 07:50, 24 August 2011

OCA — Wed, 24 Aug 2011 07:50:12 GMT

←Older revision		Revision as of 07:50, 24 August 2011
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3sy6.jpg\|left\|200px]]

-	The ~~entry 3sy6~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3sy6", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3sy6\| PDB=3sy6 \| SCENE= }}

-	~~Authors: Joint Center for Structural Genomics~~ (~~JCSG~~)	+	===Crystal structure of a fimbrial protein BF1861 [Bacteroides fragilis NCTC 9343] (BF1861) from Bacteroides fragilis NCTC 9343 at 1.90 A resolution===

-	~~Description: Crystal structure of~~ a ~~fimbrial protein BF1861~~ [Bacteroides fragilis ~~NCTC 9343~~] ~~(BF1861)~~ from Bacteroides fragilis ~~NCTC 9343 at 1~~.~~90 A resolution~~	+
		+	==About this Structure==
		+	[[3sy6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis Bacteroides fragilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SY6 OCA].
		+	[[Category: Bacteroides fragilis]]
		+	[[Category: JCSG, Joint Center for Structural Genomics.]]
		+	[[Category: Adhesion]]
		+	[[Category: Cell adhesion]]
		+	[[Category: Fimbrial protein]]
		+	[[Category: Jcsg]]
		+	[[Category: Joint center for structural genomic]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-biology]]
		+	[[Category: Structural genomic]]

OCA: Protected "3sy6" [edit=sysop:move=sysop]

OCA — Wed, 27 Jul 2011 05:44:07 GMT

Protected "3sy6" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:44, 27 July 2011

OCA: New page: '''Unreleased structure''' The entry 3sy6 is ON HOLD Authors: Joint Center for Structural Genomics (JCSG) Description: Crystal structure of a fimbrial protein BF1861 [Bacteroides fragi...

OCA — Wed, 27 Jul 2011 05:44:06 GMT

New page: '''Unreleased structure''' The entry 3sy6 is ON HOLD Authors: Joint Center for Structural Genomics (JCSG) Description: Crystal structure of a fimbrial protein BF1861 [Bacteroides fragi...

New page

'''Unreleased structure'''

The entry 3sy6 is ON HOLD

Authors: Joint Center for Structural Genomics (JCSG)

Description: Crystal structure of a fimbrial protein BF1861 [Bacteroides fragilis NCTC 9343] (BF1861) from Bacteroides fragilis NCTC 9343 at 1.90 A resolution