3t0p - Revision history

OCA at 11:51, 1 February 2023

OCA — Wed, 01 Feb 2023 11:51:06 GMT

←Older revision		Revision as of 11:51, 1 February 2023
Line 3:		Line 3:
	<StructureSection load='3t0p' size='340' side='right'caption='[[3t0p]], [[Resolution\|resolution]] 2.26Å' scene=''>		<StructureSection load='3t0p' size='340' side='right'caption='[[3t0p]], [[Resolution\|resolution]] 2.26Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3t0p]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Eubr3 Eubr3~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T0P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3T0P FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3t0p]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Eubacterium_rectale_ATCC_33656 Eubacterium rectale ATCC 33656]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T0P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3T0P FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=~~PGR~~:~~R-1,2-PROPANEDIOL~~'>~~PGR~~</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PGR:R-1,2-PROPANEDIOL'>PGR</scene></td></tr>
-	~~<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=~~MSE~~:~~SELENOMETHIONINE~~'>~~MSE~~</scene>~~</td></tr>~~	+
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EUBREC_0002 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=515619 EUBR3])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3t0p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3t0p OCA], [https://pdbe.org/3t0p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3t0p RCSB], [https://www.ebi.ac.uk/pdbsum/3t0p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3t0p ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3t0p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3t0p OCA], [https://pdbe.org/3t0p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3t0p RCSB], [https://www.ebi.ac.uk/pdbsum/3t0p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3t0p ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/~~C4Z938_EUBR3 C4Z938_EUBR3]~~] DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria~~. This DNA polymerase also~~ exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication ~~once it is clamped onto~~ DNA~~, it slides freely (bidirectional and ATP-independent) along duplex DNA (By similarity)~~.[PIRNR:PIRNR000804]	+	[https://www.uniprot.org/uniprot/C4Z938_AGARV C4Z938_AGARV] Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for processivity of DNA replication.[ARBA:ARBA00002266][PIRNR:PIRNR000804]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Eubr3]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Structural genomic]]
-	[[Category: Dna clamp]]
-	[[Category: Jcsg]]
-	[[Category: PSI, Protein structure initiative]]
-	[[Category: Psi-biology]]
-	[[Category: Transferase]]

OCA at 16:38, 6 July 2022

OCA — Wed, 06 Jul 2022 16:38:13 GMT

←Older revision		Revision as of 16:38, 6 July 2022
Line 1:		Line 1:

	==Crystal structure of a Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750) from Eubacterium rectale ATCC 33656 at 2.26 A resolution==		==Crystal structure of a Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750) from Eubacterium rectale ATCC 33656 at 2.26 A resolution==
-	<StructureSection load='3t0p' size='340' side='right' caption='[[3t0p]], [[Resolution\|resolution]] 2.26Å' scene=''>	+	<StructureSection load='3t0p' size='340' side='right'caption='[[3t0p]], [[Resolution\|resolution]] 2.26Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3t0p]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Eubr3 Eubr3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T0P OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3T0P FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3t0p]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Eubr3 Eubr3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T0P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3T0P FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PGR:R-1,2-PROPANEDIOL'>PGR</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PGR:R-1,2-PROPANEDIOL'>PGR</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EUBREC_0002 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=515619 EUBR3])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EUBREC_0002 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=515619 EUBR3])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3t0p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3t0p OCA], [~~http~~://pdbe.org/3t0p PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3t0p RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3t0p PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3t0p ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3t0p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3t0p OCA], [https://pdbe.org/3t0p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3t0p RCSB], [https://www.ebi.ac.uk/pdbsum/3t0p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3t0p ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/C4Z938_EUBR3 C4Z938_EUBR3]] DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP-independent) along duplex DNA (By similarity).[PIRNR:PIRNR000804]	+	[[https://www.uniprot.org/uniprot/C4Z938_EUBR3 C4Z938_EUBR3]] DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP-independent) along duplex DNA (By similarity).[PIRNR:PIRNR000804]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Eubr3]]		[[Category: Eubr3]]
		+	[[Category: Large Structures]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Dna clamp]]		[[Category: Dna clamp]]

OCA at 09:42, 25 October 2017

OCA — Wed, 25 Oct 2017 09:42:13 GMT

←Older revision		Revision as of 09:42, 25 October 2017
Line 11:		Line 11:
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/C4Z938_EUBR3 C4Z938_EUBR3]] DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP-independent) along duplex DNA (By similarity).[PIRNR:PIRNR000804]		[[http://www.uniprot.org/uniprot/C4Z938_EUBR3 C4Z938_EUBR3]] DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP-independent) along duplex DNA (By similarity).[PIRNR:PIRNR000804]
-
-	==See Also==
-	*[[DNA polymerase\|DNA polymerase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 12:07, 4 August 2016

OCA — Thu, 04 Aug 2016 12:07:25 GMT

←Older revision		Revision as of 12:07, 4 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of a Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750) from Eubacterium rectale ATCC 33656 at 2.26 A resolution==		==Crystal structure of a Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750) from Eubacterium rectale ATCC 33656 at 2.26 A resolution==
	<StructureSection load='3t0p' size='340' side='right' caption='[[3t0p]], [[Resolution\|resolution]] 2.26Å' scene=''>		<StructureSection load='3t0p' size='340' side='right' caption='[[3t0p]], [[Resolution\|resolution]] 2.26Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3t0p]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Eubacterium_rectale Eubacterium rectale~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T0P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3T0P FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3t0p]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Eubr3 Eubr3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T0P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3T0P FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PGR:R-1,2-PROPANEDIOL'>PGR</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PGR:R-1,2-PROPANEDIOL'>PGR</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EUBREC_0002 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~39491 Eubacterium rectale~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EUBREC_0002 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=515619 EUBR3])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3t0p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3t0p OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3t0p RCSB], [http://www.ebi.ac.uk/pdbsum/3t0p PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3t0p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3t0p OCA], [http://pdbe.org/3t0p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3t0p RCSB], [http://www.ebi.ac.uk/pdbsum/3t0p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3t0p ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/C4Z938_EUBR3 C4Z938_EUBR3]] DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP-independent) along duplex DNA (By similarity).[PIRNR:PIRNR000804]		[[http://www.uniprot.org/uniprot/C4Z938_EUBR3 C4Z938_EUBR3]] DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP-independent) along duplex DNA (By similarity).[PIRNR:PIRNR000804]
		+
		+	==See Also==
		+	*[[DNA polymerase\|DNA polymerase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Eubacterium rectale~~]]	+	[[Category: Eubr3]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Dna clamp]]		[[Category: Dna clamp]]

OCA at 14:18, 24 December 2014

OCA — Wed, 24 Dec 2014 14:18:22 GMT

←Older revision		Revision as of 14:18, 24 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3t0p]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Eubacterium_rectale Eubacterium rectale]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T0P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3T0P FirstGlance]. <br>		<table><tr><td colspan='2'>[[3t0p]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Eubacterium_rectale Eubacterium rectale]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T0P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3T0P FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PGR:R-1,2-PROPANEDIOL'>PGR</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PGR:R-1,2-PROPANEDIOL'>PGR</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EUBREC_0002 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=39491 Eubacterium rectale])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EUBREC_0002 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=39491 Eubacterium rectale])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3t0p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3t0p OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3t0p RCSB], [http://www.ebi.ac.uk/pdbsum/3t0p PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3t0p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3t0p OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3t0p RCSB], [http://www.ebi.ac.uk/pdbsum/3t0p PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/C4Z938_EUBR3 C4Z938_EUBR3]] DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP-independent) along duplex DNA (By similarity).[PIRNR:PIRNR000804]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Eubacterium rectale]]		[[Category: Eubacterium rectale]]
-	[[Category: ~~JCSG, Joint Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
	[[Category: Dna clamp]]		[[Category: Dna clamp]]
	[[Category: Jcsg]]		[[Category: Jcsg]]
-	[[Category: ~~Joint center for structural genomic]]~~	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category:~~ Protein structure initiative]]	+
	[[Category: Psi-biology]]		[[Category: Psi-biology]]
-	[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA at 05:41, 5 June 2014

OCA — Thu, 05 Jun 2014 05:41:40 GMT

←Older revision		Revision as of 05:41, 5 June 2014
Line 1:		Line 1:
-	~~[[Image:3t0p.jpg\|left\|200px]]~~	+	==Crystal structure of a Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750) from Eubacterium rectale ATCC 33656 at 2.26 A resolution==
-		+	<StructureSection load='3t0p' size='340' side='right' caption='[[3t0p]], [[Resolution\|resolution]] 2.26Å' scene=''>
-	~~<!--~~	+	== Structural highlights ==
-	~~The line below this paragraph, containing "STRUCTURE_3t0p", creates the "Structure Box" on the page.~~	+	<table><tr><td colspan='2'>[[3t0p]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Eubacterium_rectale Eubacterium rectale]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T0P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3T0P FirstGlance]. <br>
-	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PGR:R-1,2-PROPANEDIOL'>PGR</scene><br>
-	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~	+	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	~~or leave the SCENE parameter empty for the default display.~~	+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EUBREC_0002 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=39491 Eubacterium rectale])</td></tr>
-	~~-->~~	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3t0p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3t0p OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3t0p RCSB], [http://www.ebi.ac.uk/pdbsum/3t0p PDBsum]</span></td></tr>
-	~~{{STRUCTURE_3t0p\| PDB=3t0p \| SCENE= }}~~	+	<table>
-		+	__TOC__
-	===Crystal structure of a Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750) from Eubacterium rectale ATCC 33656 at 2.26 A resolution===	+	</StructureSection>
-		+
-		+
-	==~~About this Structure~~==	+
-	[[3t0p]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Eubacterium_rectale Eubacterium rectale]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T0P OCA].	+
	[[Category: Eubacterium rectale]]		[[Category: Eubacterium rectale]]
	[[Category: JCSG, Joint Center for Structural Genomics.]]		[[Category: JCSG, Joint Center for Structural Genomics.]]

OCA at 06:24, 10 August 2011

OCA — Wed, 10 Aug 2011 06:24:11 GMT

←Older revision		Revision as of 06:24, 10 August 2011
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3t0p.jpg\|left\|200px]]

-	The ~~entry 3t0p~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3t0p", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3t0p\| PDB=3t0p \| SCENE= }}

-	~~Authors: Joint Center for Structural Genomics~~ (~~JCSG~~)	+	===Crystal structure of a Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750) from Eubacterium rectale ATCC 33656 at 2.26 A resolution===

-	~~Description: Crystal structure of~~ a ~~Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750)~~ from Eubacterium rectale ~~ATCC 33656 at 2~~.~~26 A resolution~~	+
		+	==About this Structure==
		+	[[3t0p]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Eubacterium_rectale Eubacterium rectale]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T0P OCA].
		+	[[Category: Eubacterium rectale]]
		+	[[Category: JCSG, Joint Center for Structural Genomics.]]
		+	[[Category: Dna clamp]]
		+	[[Category: Jcsg]]
		+	[[Category: Joint center for structural genomic]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-biology]]
		+	[[Category: Structural genomic]]
		+	[[Category: Transferase]]

OCA: Protected "3t0p" [edit=sysop:move=sysop]

OCA — Wed, 27 Jul 2011 05:47:17 GMT

Protected "3t0p" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:47, 27 July 2011

OCA: New page: '''Unreleased structure''' The entry 3t0p is ON HOLD Authors: Joint Center for Structural Genomics (JCSG) Description: Crystal structure of a Putative DNA polymerase III beta subunit (...

OCA — Wed, 27 Jul 2011 05:47:15 GMT

New page: '''Unreleased structure''' The entry 3t0p is ON HOLD Authors: Joint Center for Structural Genomics (JCSG) Description: Crystal structure of a Putative DNA polymerase III beta subunit (...

New page

'''Unreleased structure'''

The entry 3t0p is ON HOLD

Authors: Joint Center for Structural Genomics (JCSG)

Description: Crystal structure of a Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750) from Eubacterium rectale ATCC 33656 at 2.26 A resolution