3u4f - Revision history

OCA at 08:17, 6 December 2023

OCA — Wed, 06 Dec 2023 08:17:39 GMT

←Older revision		Revision as of 08:17, 6 December 2023
Line 3:		Line 3:
	<StructureSection load='3u4f' size='340' side='right'caption='[[3u4f]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='3u4f' size='340' side='right'caption='[[3u4f]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3u4f]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Rosni Rosni~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U4F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3U4F FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3u4f]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Roseovarius_nubinhibens_ISM Roseovarius nubinhibens ISM]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U4F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3U4F FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=GAI:GUANIDINE'>GAI</scene>~~, ~~<scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.9Å</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=~~MSE~~:~~SELENOMETHIONINE~~'>~~MSE~~</scene><~~/td~~></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GAI:GUANIDINE'>GAI</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<~~tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">ISM_12500 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=89187 ROSNI])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3u4f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u4f OCA], [https://pdbe.org/3u4f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3u4f RCSB], [https://www.ebi.ac.uk/pdbsum/3u4f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3u4f ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3u4f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u4f OCA], [https://pdbe.org/3u4f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3u4f RCSB], [https://www.ebi.ac.uk/pdbsum/3u4f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3u4f ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A3SMJ4_ROSNI A3SMJ4_ROSNI]

	==See Also==		==See Also==
Line 16:		Line 17:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Rosni~~]]	+	[[Category: Roseovarius nubinhibens ISM]]
-	[[Category: Almo~~, S C~~]]	+	[[Category: Almo SC]]
-	[[Category: Chamala, S]]	+	[[Category: Chamala S]]
-	[[Category: Eswaramoorthy, S]]	+	[[Category: Eswaramoorthy S]]
-	[[Category: Evans, B]]	+	[[Category: Evans B]]
-	[[Category: Foti, R]]	+	[[Category: Foti R]]
-	[[Category: Gizzi, A]]	+	[[Category: Gizzi A]]
-	[[Category: Hillerich, B]]	+	[[Category: Hillerich B]]
-	[[Category: Kar, A]]	+	[[Category: Kar A]]
-	[[Category: Kumaran, D]]	+	[[Category: Kumaran D]]
-	[[Category: LaFleur, J]]	+	[[Category: LaFleur J]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Seidel R]]
-	[[Category: Seidel, R]]	+	[[Category: Swaminathan S]]
-	[[Category: Swaminathan, S]]	+	[[Category: Villigas G]]
-	[[Category: Villigas, G]]	+	[[Category: Zencheck W]]
-	[[Category: Zencheck, W]]	+
-	~~[[Category: Dimer]]~~	+
-	~~[[Category: Enolase superfamily]]~~	+
-	~~[[Category: Isomerase]]~~	+
-	~~[[Category: Mg ion]]~~	+
-	~~[[Category: Nysgrc]]~~	+
-	~~[[Category: Psi-biology]]~~	+
-	~~[[Category: Racemase]]~~	+
-	~~[[Category: Tim barrel~~]]	+

OCA at 05:57, 13 July 2022

OCA — Wed, 13 Jul 2022 05:57:20 GMT

←Older revision		Revision as of 05:57, 13 July 2022
Line 1:		Line 1:

	==Crystal structure of a mandelate racemase (muconate lactonizing enzyme family protein) from Roseovarius nubinhibens==		==Crystal structure of a mandelate racemase (muconate lactonizing enzyme family protein) from Roseovarius nubinhibens==
-	<StructureSection load='3u4f' size='340' side='right' caption='[[3u4f]], [[Resolution\|resolution]] 1.90Å' scene=''>	+	<StructureSection load='3u4f' size='340' side='right'caption='[[3u4f]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3u4f]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Roseobacter_sp._ism Roseobacter sp. ism~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U4F OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3U4F FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3u4f]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rosni Rosni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U4F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3U4F FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GAI:GUANIDINE'>GAI</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GAI:GUANIDINE'>GAI</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ISM_12500 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=89187 ~~Roseobacter sp. ISM~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ISM_12500 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=89187 ROSNI])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3u4f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u4f OCA], [~~http~~://pdbe.org/3u4f PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3u4f RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3u4f PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3u4f ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3u4f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u4f OCA], [https://pdbe.org/3u4f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3u4f RCSB], [https://www.ebi.ac.uk/pdbsum/3u4f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3u4f ProSAT]</span></td></tr>
	</table>		</table>

	==See Also==		==See Also==
	*[[Mandelate racemase\|Mandelate racemase]]		*[[Mandelate racemase\|Mandelate racemase]]
		+	*[[Mandelate racemase/muconate lactonizing enzyme 3D structures\|Mandelate racemase/muconate lactonizing enzyme 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Roseobacter sp. ism~~]]	+	[[Category: Large Structures]]
		+	[[Category: Rosni]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: Chamala, S]]		[[Category: Chamala, S]]

OCA at 06:13, 5 August 2016

OCA — Fri, 05 Aug 2016 06:13:17 GMT

←Older revision		Revision as of 06:13, 5 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of a mandelate racemase (muconate lactonizing enzyme family protein) from Roseovarius nubinhibens==		==Crystal structure of a mandelate racemase (muconate lactonizing enzyme family protein) from Roseovarius nubinhibens==
	<StructureSection load='3u4f' size='340' side='right' caption='[[3u4f]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='3u4f' size='340' side='right' caption='[[3u4f]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3u4f]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Roseovarius_nubinhibens_ism Roseovarius nubinhibens~~ ism]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U4F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3U4F FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3u4f]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Roseobacter_sp._ism Roseobacter sp. ism]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U4F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3U4F FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GAI:GUANIDINE'>GAI</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GAI:GUANIDINE'>GAI</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ISM_12500 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=89187 ~~Roseovarius nubinhibens~~ ISM])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ISM_12500 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=89187 Roseobacter sp. ISM])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3u4f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u4f OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3u4f RCSB], [http://www.ebi.ac.uk/pdbsum/3u4f PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3u4f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u4f OCA], [http://pdbe.org/3u4f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3u4f RCSB], [http://www.ebi.ac.uk/pdbsum/3u4f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3u4f ProSAT]</span></td></tr>
	</table>		</table>

Line 13:		Line 14:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Roseovarius nubinhibens~~ ism]]	+	[[Category: Roseobacter sp. ism]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: Chamala, S]]		[[Category: Chamala, S]]

OCA at 08:40, 18 December 2014

OCA — Thu, 18 Dec 2014 08:40:47 GMT

←Older revision		Revision as of 08:40, 18 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3u4f\| PDB=3u4f \| SCENE= }}~~	+	==Crystal structure of a mandelate racemase (muconate lactonizing enzyme family protein) from Roseovarius nubinhibens==
-	===Crystal structure of a mandelate racemase (muconate lactonizing enzyme family protein) from Roseovarius nubinhibens===	+	<StructureSection load='3u4f' size='340' side='right' caption='[[3u4f]], [[Resolution\|resolution]] 1.90Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[3u4f]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Roseovarius_nubinhibens_ism Roseovarius nubinhibens ism]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U4F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3U4F FirstGlance]. <br>
-	[[3u4f]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Roseovarius_nubinhibens_ism Roseovarius nubinhibens ism]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U4F OCA].	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GAI:GUANIDINE'>GAI</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ISM_12500 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=89187 Roseovarius nubinhibens ISM])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3u4f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u4f OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3u4f RCSB], [http://www.ebi.ac.uk/pdbsum/3u4f PDBsum]</span></td></tr>
		+	</table>

	==See Also==		==See Also==
	*[[Mandelate racemase\|Mandelate racemase]]		*[[Mandelate racemase\|Mandelate racemase]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Roseovarius nubinhibens ism]]		[[Category: Roseovarius nubinhibens ism]]
-	[[Category: Almo, S C.]]	+	[[Category: Almo, S C]]
-	[[Category: Chamala, S.]]	+	[[Category: Chamala, S]]
-	[[Category: Eswaramoorthy, S.]]	+	[[Category: Eswaramoorthy, S]]
-	[[Category: Evans, B.]]	+	[[Category: Evans, B]]
-	[[Category: Foti, R.]]	+	[[Category: Foti, R]]
-	[[Category: Gizzi, A.]]	+	[[Category: Gizzi, A]]
-	[[Category: Hillerich, B.]]	+	[[Category: Hillerich, B]]
-	[[Category: Kar, A.]]	+	[[Category: Kar, A]]
-	[[Category: Kumaran, D.]]	+	[[Category: Kumaran, D]]
-	[[Category: LaFleur, J.]]	+	[[Category: LaFleur, J]]
-	[[Category: ~~NYSGRC, New York~~ Structural ~~Genomics Research Consortium.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Seidel, R.]]	+	[[Category: Seidel, R]]
-	[[Category: Swaminathan, S.]]	+	[[Category: Swaminathan, S]]
-	[[Category: Villigas, G.]]	+	[[Category: Villigas, G]]
-	[[Category: Zencheck, W.]]	+	[[Category: Zencheck, W]]
	[[Category: Dimer]]		[[Category: Dimer]]
	[[Category: Enolase superfamily]]		[[Category: Enolase superfamily]]
	[[Category: Isomerase]]		[[Category: Isomerase]]
	[[Category: Mg ion]]		[[Category: Mg ion]]
-	[[Category: New york structural genomics research consortium]]
	[[Category: Nysgrc]]		[[Category: Nysgrc]]
	[[Category: Psi-biology]]		[[Category: Psi-biology]]
	[[Category: Racemase]]		[[Category: Racemase]]
-	[[Category: Structural genomic]]
	[[Category: Tim barrel]]		[[Category: Tim barrel]]

OCA at 10:35, 11 March 2013

OCA — Mon, 11 Mar 2013 10:35:49 GMT

←Older revision		Revision as of 10:35, 11 March 2013
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-	[[Image:3u4f.png\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3u4f", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
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	{{STRUCTURE_3u4f\| PDB=3u4f \| SCENE= }}		{{STRUCTURE_3u4f\| PDB=3u4f \| SCENE= }}
-
	===Crystal structure of a mandelate racemase (muconate lactonizing enzyme family protein) from Roseovarius nubinhibens===		===Crystal structure of a mandelate racemase (muconate lactonizing enzyme family protein) from Roseovarius nubinhibens===
-

	==About this Structure==		==About this Structure==
	[[3u4f]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Roseovarius_nubinhibens_ism Roseovarius nubinhibens ism]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U4F OCA].		[[3u4f]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Roseovarius_nubinhibens_ism Roseovarius nubinhibens ism]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U4F OCA].
		+
		+	==See Also==
		+	*[[Mandelate racemase\|Mandelate racemase]]
	[[Category: Roseovarius nubinhibens ism]]		[[Category: Roseovarius nubinhibens ism]]
	[[Category: Almo, S C.]]		[[Category: Almo, S C.]]

OCA: Protected "3u4f" [edit=sysop:move=sysop]

OCA — Sun, 30 Oct 2011 10:26:40 GMT

Protected "3u4f" [edit=sysop:move=sysop]

←Older revision

Revision as of 10:26, 30 October 2011