3u6d - Revision history

OCA at 05:59, 13 July 2022

OCA — Wed, 13 Jul 2022 05:59:47 GMT

←Older revision		Revision as of 05:59, 13 July 2022
Line 1:		Line 1:

	==MutM set 1 GpGo==		==MutM set 1 GpGo==
-	<StructureSection load='3u6d' size='340' side='right' caption='[[3u6d]], [[Resolution\|resolution]] 1.87Å' scene=''>	+	<StructureSection load='3u6d' size='340' side='right'caption='[[3u6d]], [[Resolution\|resolution]] 1.87Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3u6d]] is a 3 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Atcc_12980 Atcc 12980]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U6D OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3U6D FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3u6d]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_12980 Atcc 12980]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U6D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3U6D FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=08Q:5-O-{(S)-HYDROXY[(2-SULFANYLETHYL)AMINO]PHOSPHORYL}THYMIDINE'>08Q</scene>, <scene name='pdbligand=8OG:8-OXO-2-DEOXY-GUANOSINE-5-MONOPHOSPHATE'>8OG</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=08Q:5-O-{(S)-HYDROXY[(2-SULFANYLETHYL)AMINO]PHOSPHORYL}THYMIDINE'>08Q</scene>, <scene name='pdbligand=8OG:8-OXO-2-DEOXY-GUANOSINE-5-MONOPHOSPHATE'>8OG</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3u6c\|3u6c]], [[3u6e\|3u6e]], [[3u6l\|3u6l]], [[3u6m\|3u6m]], [[3u6o\|3u6o]], [[3u6p\|3u6p]], [[3u6q\|3u6q]], [[3u6s\|3u6s]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3u6c\|3u6c]], [[3u6e\|3u6e]], [[3u6l\|3u6l]], [[3u6m\|3u6m]], [[3u6o\|3u6o]], [[3u6p\|3u6p]], [[3u6q\|3u6q]], [[3u6s\|3u6s]]</div></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/DNA-formamidopyrimidine_glycosylase DNA-formamidopyrimidine glycosylase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.23 3.2.2.23] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/DNA-formamidopyrimidine_glycosylase DNA-formamidopyrimidine glycosylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.23 3.2.2.23] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3u6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u6d OCA], [~~http~~://pdbe.org/3u6d PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3u6d RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3u6d PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3u6d ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3u6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u6d OCA], [https://pdbe.org/3u6d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3u6d RCSB], [https://www.ebi.ac.uk/pdbsum/3u6d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3u6d ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/P84131_GEOSE P84131_GEOSE]] Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates (By similarity).[HAMAP-Rule:MF_00103][SAAS:SAAS020629_004_120556]	+	[[https://www.uniprot.org/uniprot/P84131_GEOSE P84131_GEOSE]] Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates (By similarity).[HAMAP-Rule:MF_00103][SAAS:SAAS020629_004_120556]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 23:		Line 23:

	==See Also==		==See Also==
-	*[[DNA glycosylase\|DNA glycosylase]]	+	*[[DNA glycosylase 3D structures\|DNA glycosylase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 30:		Line 30:
	[[Category: Atcc 12980]]		[[Category: Atcc 12980]]
	[[Category: DNA-formamidopyrimidine glycosylase]]		[[Category: DNA-formamidopyrimidine glycosylase]]
		+	[[Category: Large Structures]]
	[[Category: Qi, Y]]		[[Category: Qi, Y]]
	[[Category: Sung, R J]]		[[Category: Sung, R J]]

OCA at 16:38, 4 August 2016

OCA — Thu, 04 Aug 2016 16:38:54 GMT

←Older revision		Revision as of 16:38, 4 August 2016
Line 1:		Line 1:
		+
	==MutM set 1 GpGo==		==MutM set 1 GpGo==
	<StructureSection load='3u6d' size='340' side='right' caption='[[3u6d]], [[Resolution\|resolution]] 1.87Å' scene=''>		<StructureSection load='3u6d' size='340' side='right' caption='[[3u6d]], [[Resolution\|resolution]] 1.87Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3u6d]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Geobacillus_stearothermophilus Geobacillus stearothermophilus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U6D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3U6D FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3u6d]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_12980 Atcc 12980]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U6D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3U6D FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=08Q:5-O-{(S)-HYDROXY[(2-SULFANYLETHYL)AMINO]PHOSPHORYL}THYMIDINE'>08Q</scene>, <scene name='pdbligand=8OG:8-OXO-2-DEOXY-GUANOSINE-5-MONOPHOSPHATE'>8OG</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=08Q:5-O-{(S)-HYDROXY[(2-SULFANYLETHYL)AMINO]PHOSPHORYL}THYMIDINE'>08Q</scene>, <scene name='pdbligand=8OG:8-OXO-2-DEOXY-GUANOSINE-5-MONOPHOSPHATE'>8OG</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3u6c\|3u6c]], [[3u6e\|3u6e]], [[3u6l\|3u6l]], [[3u6m\|3u6m]], [[3u6o\|3u6o]], [[3u6p\|3u6p]], [[3u6q\|3u6q]], [[3u6s\|3u6s]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3u6c\|3u6c]], [[3u6e\|3u6e]], [[3u6l\|3u6l]], [[3u6m\|3u6m]], [[3u6o\|3u6o]], [[3u6p\|3u6p]], [[3u6q\|3u6q]], [[3u6s\|3u6s]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-formamidopyrimidine_glycosylase DNA-formamidopyrimidine glycosylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.23 3.2.2.23] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-formamidopyrimidine_glycosylase DNA-formamidopyrimidine glycosylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.23 3.2.2.23] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3u6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u6d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3u6d RCSB], [http://www.ebi.ac.uk/pdbsum/3u6d PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3u6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u6d OCA], [http://pdbe.org/3u6d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3u6d RCSB], [http://www.ebi.ac.uk/pdbsum/3u6d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3u6d ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 19:		Line 20:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3u6d" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 26:		Line 28:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Atcc 12980]]
	[[Category: DNA-formamidopyrimidine glycosylase]]		[[Category: DNA-formamidopyrimidine glycosylase]]
-	[[Category: Geobacillus stearothermophilus]]
	[[Category: Qi, Y]]		[[Category: Qi, Y]]
	[[Category: Sung, R J]]		[[Category: Sung, R J]]

OCA at 17:07, 24 December 2014

OCA — Wed, 24 Dec 2014 17:07:46 GMT

←Older revision		Revision as of 17:07, 24 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3u6d\| PDB~~=3u6d \| ~~SCENE~~= }}	+	==MutM set 1 GpGo==
-	===~~MutM set 1 GpGo~~===	+	<StructureSection load='3u6d' size='340' side='right' caption='[[3u6d]], [[Resolution\|resolution]] 1.87Å' scene=''>
-	{~~{ABSTRACT_PUBMED_22465958}~~}	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[3u6d]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U6D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3U6D FirstGlance]. <br>
-	==Function==	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=08Q:5-O-{(S)-HYDROXY[(2-SULFANYLETHYL)AMINO]PHOSPHORYL}THYMIDINE'>08Q</scene>, <scene name='pdbligand=8OG:8-OXO-2-DEOXY-GUANOSINE-5-MONOPHOSPHATE'>8OG</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3u6c\|3u6c]], [[3u6e\|3u6e]], [[3u6l\|3u6l]], [[3u6m\|3u6m]], [[3u6o\|3u6o]], [[3u6p\|3u6p]], [[3u6q\|3u6q]], [[3u6s\|3u6s]]</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-formamidopyrimidine_glycosylase DNA-formamidopyrimidine glycosylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.23 3.2.2.23] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3u6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u6d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3u6d RCSB], [http://www.ebi.ac.uk/pdbsum/3u6d PDBsum]</span></td></tr>
		+	</table>
		+	== Function ==
	[[http://www.uniprot.org/uniprot/P84131_GEOSE P84131_GEOSE]] Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates (By similarity).[HAMAP-Rule:MF_00103][SAAS:SAAS020629_004_120556]		[[http://www.uniprot.org/uniprot/P84131_GEOSE P84131_GEOSE]] Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates (By similarity).[HAMAP-Rule:MF_00103][SAAS:SAAS020629_004_120556]
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	MutM, a bacterial DNA-glycosylase, plays a critical role in maintaining genome integrity by catalyzing glycosidic bond cleavage of 8-oxoguanine (oxoG) lesions to initiate base excision DNA repair (BER). The task faced by MutM of locating rare oxoG residues embedded in an overwhelming excess of undamaged bases is especially challenging, given the close structural similarity between oxoG and its normal progenitor, G. MutM actively interrogates the DNA in order to detect the presence of an intrahelical, fully base-paired oxoG, whereupon the enzyme promotes extrusion of the target nucleobase from the DNA duplex and insertion into the extrahelical active site. Recent structural studies have begun to provide the first glimpse into the protein-DNA interactions that enable MutM to distinguish an intrahelical oxoG from G; however, these initial studies left open the important question of how MutM can recognize oxoG residues embedded in 16 different neighboring sequence contexts (considering only the 5'- and 3'-neigboring base pairs). In this study, we set out to understand the manner and extent to which intrahelical lesion recognition varies as a function of the 5'-neighbor. Here we report a comprehensive, systematic structural analysis of the effect of the 5'-neighboring base-pair on recognition of an intrahelical oxoG lesion. These structures reveal that MutM imposes the same extrusion-prone (''extrudogenic'') backbone conformation on the oxoG lesion, irrespective of its 5'-neighbor, while leaving the rest of the DNA relatively free to adjust to the particular demands of individual sequences.
		+
		+	SEQUENCE-DEPENDENT STRUCTURAL VARIATION IN DNA UNDERGOING INTRAHELICAL INSPECTION BY MUTM.,Sung RJ, Zhang M, Qi Y, Verdine GL J Biol Chem. 2012 Mar 30. PMID:22465958<ref>PMID:22465958</ref>

-	~~==About this Structure==~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~[[3u6d]] is~~ a ~~3 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3U6D OCA].~~	+	</div>

-	==~~Reference~~==	+	==See Also==
-	~~<ref group~~=~~"xtra">PMID:022465958</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	*[[DNA glycosylase\|DNA glycosylase]]
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: DNA-formamidopyrimidine glycosylase]]		[[Category: DNA-formamidopyrimidine glycosylase]]
	[[Category: Geobacillus stearothermophilus]]		[[Category: Geobacillus stearothermophilus]]
-	[[Category: Qi, Y.]]	+	[[Category: Qi, Y]]
-	[[Category: Sung, R J.]]	+	[[Category: Sung, R J]]
-	[[Category: Verdine, G L.]]	+	[[Category: Verdine, G L]]
-	[[Category: Zhang, M.]]	+	[[Category: Zhang, M]]
	[[Category: Disulfide crosslinking]]		[[Category: Disulfide crosslinking]]
	[[Category: Dna glycosylase]]		[[Category: Dna glycosylase]]

OCA at 06:39, 29 September 2013

OCA — Sun, 29 Sep 2013 06:39:59 GMT

←Older revision		Revision as of 06:39, 29 September 2013
Line 1:		Line 1:
-	[[Image:3u6d.png\|left\|200px]]
-
	{{STRUCTURE_3u6d\| PDB=3u6d \| SCENE= }}		{{STRUCTURE_3u6d\| PDB=3u6d \| SCENE= }}
-
	===MutM set 1 GpGo===		===MutM set 1 GpGo===
		+	{{ABSTRACT_PUBMED_22465958}}

-	~~{{ABSTRACT_PUBMED_22465958}}~~	+	==Function==
		+	[[http://www.uniprot.org/uniprot/P84131_GEOSE P84131_GEOSE]] Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates (By similarity).[HAMAP-Rule:MF_00103][SAAS:SAAS020629_004_120556]

	==About this Structure==		==About this Structure==
Line 11:		Line 10:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:022465958</ref><references group="xtra"/>	+	<ref group="xtra">PMID:022465958</ref><references group="xtra"/><references/>
	[[Category: DNA-formamidopyrimidine glycosylase]]		[[Category: DNA-formamidopyrimidine glycosylase]]
	[[Category: Geobacillus stearothermophilus]]		[[Category: Geobacillus stearothermophilus]]

OCA at 05:35, 29 August 2012

OCA — Wed, 29 Aug 2012 05:35:24 GMT

←Older revision		Revision as of 05:35, 29 August 2012
Line 1:		Line 1:
-	[[Image:3u6d.~~jpg~~\|left\|200px]]	+	[[Image:3u6d.png\|left\|200px]]

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	{{STRUCTURE_3u6d\| PDB=3u6d \| SCENE= }}		{{STRUCTURE_3u6d\| PDB=3u6d \| SCENE= }}

	===MutM set 1 GpGo===		===MutM set 1 GpGo===

-
-	<!--
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	{{ABSTRACT_PUBMED_22465958}}		{{ABSTRACT_PUBMED_22465958}}

OCA at 09:16, 25 April 2012

OCA — Wed, 25 Apr 2012 09:16:20 GMT

←Older revision		Revision as of 09:16, 25 April 2012
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-	~~'''Unreleased structure'''~~	+	[[Image:3u6d.jpg\|left\|200px]]

-	The ~~entry 3u6d~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3u6d", creates the "Structure Box" on the page.
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		+	{{STRUCTURE_3u6d\| PDB=3u6d \| SCENE= }}

-	~~Authors: Sung, R.J., Zhang, M., Qi, Y., Verdine, G.L.~~	+	===MutM set 1 GpGo===

-	~~Description~~: ~~MutM set 1 GpGo~~	+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_22465958}}, adds the Publication Abstract to the page
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		+	{{ABSTRACT_PUBMED_22465958}}
		+
		+	==About this Structure==
		+	[[3u6d]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U6D OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:022465958</ref><references group="xtra"/>
		+	[[Category: DNA-formamidopyrimidine glycosylase]]
		+	[[Category: Geobacillus stearothermophilus]]
		+	[[Category: Qi, Y.]]
		+	[[Category: Sung, R J.]]
		+	[[Category: Verdine, G L.]]
		+	[[Category: Zhang, M.]]
		+	[[Category: Disulfide crosslinking]]
		+	[[Category: Dna glycosylase]]
		+	[[Category: Dna repair]]
		+	[[Category: Hydrolase-dna complex]]
		+	[[Category: Lesion recognition]]
		+	[[Category: Sequence context]]

OCA at 18:34, 23 November 2011

OCA — Wed, 23 Nov 2011 18:34:07 GMT

←Older revision		Revision as of 18:34, 23 November 2011
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3u6d is ON HOLD	+	The entry 3u6d is ON HOLD until Paper Publication

	Authors: Sung, R.J., Zhang, M., Qi, Y., Verdine, G.L.		Authors: Sung, R.J., Zhang, M., Qi, Y., Verdine, G.L.

	Description: MutM set 1 GpGo		Description: MutM set 1 GpGo

OCA: Protected "3u6d" [edit=sysop:move=sysop]

OCA — Sun, 30 Oct 2011 08:52:45 GMT

Protected "3u6d" [edit=sysop:move=sysop]

←Older revision

Revision as of 08:52, 30 October 2011

OCA: New page: '''Unreleased structure''' The entry 3u6d is ON HOLD Authors: Sung, R.J., Zhang, M., Qi, Y., Verdine, G.L. Description: MutM set 1 GpGo

OCA — Sun, 30 Oct 2011 08:52:44 GMT

New page: '''Unreleased structure''' The entry 3u6d is ON HOLD Authors: Sung, R.J., Zhang, M., Qi, Y., Verdine, G.L. Description: MutM set 1 GpGo

New page

'''Unreleased structure'''

The entry 3u6d is ON HOLD

Authors: Sung, R.J., Zhang, M., Qi, Y., Verdine, G.L.

Description: MutM set 1 GpGo