3v39 - Revision history

OCA at 08:27, 20 July 2022

OCA — Wed, 20 Jul 2022 08:27:11 GMT

←Older revision		Revision as of 08:27, 20 July 2022
Line 1:		Line 1:

	==Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio bacteriovorus==		==Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio bacteriovorus==
-	<StructureSection load='3v39' size='340' side='right' caption='[[3v39]], [[Resolution\|resolution]] 1.45Å' scene=''>	+	<StructureSection load='3v39' size='340' side='right'caption='[[3v39]], [[Resolution\|resolution]] 1.45Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3v39]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Atcc_15356 Atcc 15356]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V39 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3V39 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3v39]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_15356 Atcc 15356]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V39 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3V39 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TAU:2-AMINOETHANESULFONIC+ACID'>TAU</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TAU:2-AMINOETHANESULFONIC+ACID'>TAU</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Bd3459 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=959 ATCC 15356])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Bd3459 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=959 ATCC 15356])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Serine-type_D-Ala-D-Ala_carboxypeptidase Serine-type D-Ala-D-Ala carboxypeptidase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.4 3.4.16.4] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Serine-type_D-Ala-D-Ala_carboxypeptidase Serine-type D-Ala-D-Ala carboxypeptidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.4 3.4.16.4] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3v39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v39 OCA], [~~http~~://pdbe.org/3v39 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3v39 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3v39 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3v39 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3v39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v39 OCA], [https://pdbe.org/3v39 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3v39 RCSB], [https://www.ebi.ac.uk/pdbsum/3v39 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3v39 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 23:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Atcc 15356]]		[[Category: Atcc 15356]]
		+	[[Category: Large Structures]]
	[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]		[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]
	[[Category: Lerner, T R]]		[[Category: Lerner, T R]]

OCA at 19:05, 11 August 2016

OCA — Thu, 11 Aug 2016 19:05:32 GMT

←Older revision		Revision as of 19:05, 11 August 2016
Line 1:		Line 1:
		+
	==Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio bacteriovorus==		==Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio bacteriovorus==
	<StructureSection load='3v39' size='340' side='right' caption='[[3v39]], [[Resolution\|resolution]] 1.45Å' scene=''>		<StructureSection load='3v39' size='340' side='right' caption='[[3v39]], [[Resolution\|resolution]] 1.45Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3v39]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bdellovibrio_bacteriovorus Bdellovibrio bacteriovorus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V39 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3V39 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3v39]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_15356 Atcc 15356]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V39 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3V39 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TAU:2-AMINOETHANESULFONIC+ACID'>TAU</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TAU:2-AMINOETHANESULFONIC+ACID'>TAU</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Bd3459 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=959 ~~Bdellovibrio bacteriovorus~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Bd3459 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=959 ATCC 15356])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serine-type_D-Ala-D-Ala_carboxypeptidase Serine-type D-Ala-D-Ala carboxypeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.4 3.4.16.4] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serine-type_D-Ala-D-Ala_carboxypeptidase Serine-type D-Ala-D-Ala carboxypeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.4 3.4.16.4] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3v39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v39 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3v39 RCSB], [http://www.ebi.ac.uk/pdbsum/3v39 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3v39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v39 OCA], [http://pdbe.org/3v39 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3v39 RCSB], [http://www.ebi.ac.uk/pdbsum/3v39 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3v39 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 16:		Line 17:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3v39" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bdellovibrio bacteriovorus~~]]	+	[[Category: Atcc 15356]]
	[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]		[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]
	[[Category: Lerner, T R]]		[[Category: Lerner, T R]]

OCA at 10:42, 4 January 2015

OCA — Sun, 04 Jan 2015 10:42:43 GMT

←Older revision		Revision as of 10:42, 4 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3v39]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bdellovibrio_bacteriovorus Bdellovibrio bacteriovorus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V39 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3V39 FirstGlance]. <br>		<table><tr><td colspan='2'>[[3v39]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bdellovibrio_bacteriovorus Bdellovibrio bacteriovorus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V39 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3V39 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TAU:2-AMINOETHANESULFONIC+ACID'>TAU</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TAU:2-AMINOETHANESULFONIC+ACID'>TAU</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Bd3459 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=959 Bdellovibrio bacteriovorus])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Bd3459 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=959 Bdellovibrio bacteriovorus])</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serine-type_D-Ala-D-Ala_carboxypeptidase Serine-type D-Ala-D-Ala carboxypeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.4 3.4.16.4] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serine-type_D-Ala-D-Ala_carboxypeptidase Serine-type D-Ala-D-Ala carboxypeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.4 3.4.16.4] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3v39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v39 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3v39 RCSB], [http://www.ebi.ac.uk/pdbsum/3v39 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3v39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v39 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3v39 RCSB], [http://www.ebi.ac.uk/pdbsum/3v39 PDBsum]</span></td></tr>
-	<table>	+	</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 14:		Line 14:
	Specialized peptidoglycan hydrolases sculpt the intra-bacterial niche of predatory Bdellovibrio and increase population fitness.,Lerner TR, Lovering AL, Bui NK, Uchida K, Aizawa S, Vollmer W, Sockett RE PLoS Pathog. 2012 Feb;8(2):e1002524. Epub 2012 Feb 9. PMID:22346754<ref>PMID:22346754</ref>		Specialized peptidoglycan hydrolases sculpt the intra-bacterial niche of predatory Bdellovibrio and increase population fitness.,Lerner TR, Lovering AL, Bui NK, Uchida K, Aizawa S, Vollmer W, Sockett RE PLoS Pathog. 2012 Feb;8(2):e1002524. Epub 2012 Feb 9. PMID:22346754<ref>PMID:22346754</ref>

-	From ~~MEDLINEÂ®~~/~~PubMedÂ®~~, a database of the U.S. National Library of Medicine.<br>	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
	== References ==		== References ==
Line 22:		Line 22:
	[[Category: Bdellovibrio bacteriovorus]]		[[Category: Bdellovibrio bacteriovorus]]
	[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]		[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]
-	[[Category: Lerner, T R.]]	+	[[Category: Lerner, T R]]
-	[[Category: Lovering, A L.]]	+	[[Category: Lovering, A L]]
-	[[Category: Sockett, R E.]]	+	[[Category: Sockett, R E]]
	[[Category: Endopeptidase]]		[[Category: Endopeptidase]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Peptidoglycan transpeptidase fold]]		[[Category: Peptidoglycan transpeptidase fold]]
	[[Category: Serine modified by hepes buffer molecule]]		[[Category: Serine modified by hepes buffer molecule]]

OCA at 06:16, 5 June 2014

OCA — Thu, 05 Jun 2014 06:16:45 GMT

←Older revision		Revision as of 06:16, 5 June 2014
Line 1:		Line 1:
-	[[~~Image:~~3v39.~~png~~\|~~left~~\|~~200px~~]]	+	==Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio bacteriovorus==
		+	<StructureSection load='3v39' size='340' side='right' caption='[[3v39]], [[Resolution\|resolution]] 1.45Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3v39]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bdellovibrio_bacteriovorus Bdellovibrio bacteriovorus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V39 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3V39 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TAU:2-AMINOETHANESULFONIC+ACID'>TAU</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Bd3459 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=959 Bdellovibrio bacteriovorus])</td></tr>
		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serine-type_D-Ala-D-Ala_carboxypeptidase Serine-type D-Ala-D-Ala carboxypeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.4 3.4.16.4] </span></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3v39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v39 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3v39 RCSB], [http://www.ebi.ac.uk/pdbsum/3v39 PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Bdellovibrio are predatory bacteria that have evolved to invade virtually all gram-negative bacteria, including many prominent pathogens. Upon invasion, prey bacteria become rounded up into an osmotically stable niche for the Bdellovibrio, preventing further superinfection and allowing Bdellovibrio to replicate inside without competition, killing the prey bacterium and degrading its contents. Historically, prey rounding was hypothesized to be associated with peptidoglycan (PG) metabolism; we found two Bdellovibrio genes, bd0816 and bd3459, expressed at prey entry and encoding proteins with limited homologies to conventional dacB/PBP4 DD-endo/carboxypeptidases (responsible for peptidoglycan maintenance during growth and division). We tested possible links between Bd0816/3459 activity and predation. Bd3459, but not an active site serine mutant protein, bound beta-lactam, exhibited DD-endo/carboxypeptidase activity against purified peptidoglycan and, importantly, rounded up E. coli cells upon periplasmic expression. A DeltaBd0816 DeltaBd3459 double mutant invaded prey more slowly than the wild type (with negligible prey cell rounding) and double invasions of single prey by more than one Bdellovibrio became more frequent. We solved the crystal structure of Bd3459 to 1.45 A and this revealed predation-associated domain differences to conventional PBP4 housekeeping enzymes (loss of the regulatory domain III, alteration of domain II and a more exposed active site). The Bd3459 active site (and by similarity the Bd0816 active site) can thus accommodate and remodel the various bacterial PGs that Bdellovibrio may encounter across its diverse prey range, compared to the more closed active site that "regular" PBP4s have for self cell wall maintenance. Therefore, during evolution, Bdellovibrio peptidoglycan endopeptidases have adapted into secreted predation-specific proteins, preventing wasteful double invasion, and allowing activity upon the diverse prey peptidoglycan structures to sculpt the prey cell into a stable intracellular niche for replication.

-	<!--	+	Specialized peptidoglycan hydrolases sculpt the intra-bacterial niche of predatory Bdellovibrio and increase population fitness.,Lerner TR, Lovering AL, Bui NK, Uchida K, Aizawa S, Vollmer W, Sockett RE PLoS Pathog. 2012 Feb;8(2):e1002524. Epub 2012 Feb 9. PMID:22346754<ref>PMID:22346754</ref>
-	~~The line below this paragraph~~, ~~containing "STRUCTURE_3v39"~~, ~~creates the "Structure Box" on the page~~.	+
-	~~You may change the PDB parameter~~ (~~which sets the PDB file loaded into the applet~~)	+
-	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~	+
-	~~or leave the SCENE parameter empty for the default display~~.	+
-	-->	+
-	~~{{STRUCTURE_3v39\| PDB=3v39 \| SCENE= }}~~	+

-	~~===Bd3459~~, ~~A Predatory Peptidoglycan Endopeptidase from Bdellovibrio bacteriovorus===~~	+	From MEDLINEÂ®/PubMedÂ®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-		+	== References ==
-	~~<!--~~	+	<references/>
-	~~The line below this paragraph, {{ABSTRACT_PUBMED_22346754}}, adds~~ the ~~Publication Abstract to the page~~	+	__TOC__
-	~~(as it appears on PubMed at http://www~~.~~pubmed~~.~~gov), where 22346754 is the PubMed ID number~~.	+	</StructureSection>
-	-->	+
-	~~{{ABSTRACT_PUBMED_22346754}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[3v39]] is a 1 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Bdellovibrio_bacteriovorus Bdellovibrio bacteriovorus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V39 OCA].~~	+
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:022346754<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Bdellovibrio bacteriovorus]]		[[Category: Bdellovibrio bacteriovorus]]
	[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]		[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]

OCA at 05:56, 11 April 2012

OCA — Wed, 11 Apr 2012 05:56:08 GMT

←Older revision		Revision as of 05:56, 11 April 2012
Line 1:		Line 1:
-	[[Image:3v39.~~jpg~~\|left\|200px]]	+	[[Image:3v39.png\|left\|200px]]

	<!--		<!--
Line 11:		Line 11:
	===Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio bacteriovorus===		===Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio bacteriovorus===

		+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_22346754}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 22346754 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_22346754}}

	==About this Structure==		==About this Structure==
	[[3v39]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bdellovibrio_bacteriovorus Bdellovibrio bacteriovorus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V39 OCA].		[[3v39]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bdellovibrio_bacteriovorus Bdellovibrio bacteriovorus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V39 OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:022346754</ref><references group="xtra"/>
	[[Category: Bdellovibrio bacteriovorus]]		[[Category: Bdellovibrio bacteriovorus]]
	[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]		[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]

OCA at 07:59, 22 February 2012

OCA — Wed, 22 Feb 2012 07:59:37 GMT

←Older revision		Revision as of 07:59, 22 February 2012
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3v39.jpg\|left\|200px]]

-	The ~~entry 3v39~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3v39", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3v39\| PDB=3v39 \| SCENE= }}

-	~~Authors: Lovering~~, A~~.L., Lerner, T.R., Sockett, R.E.~~	+	===Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio bacteriovorus===

-	~~Description~~: ~~Bd3459, A Predatory Peptidoglycan Endopeptidase~~ from Bdellovibrio bacteriovorus	+
		+	==About this Structure==
		+	[[3v39]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bdellovibrio_bacteriovorus Bdellovibrio bacteriovorus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V39 OCA].
		+	[[Category: Bdellovibrio bacteriovorus]]
		+	[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]
		+	[[Category: Lerner, T R.]]
		+	[[Category: Lovering, A L.]]
		+	[[Category: Sockett, R E.]]
		+	[[Category: Endopeptidase]]
		+	[[Category: Hydrolase]]
		+	[[Category: Peptidoglycan transpeptidase fold]]
		+	[[Category: Serine modified by hepes buffer molecule]]

OCA at 06:01, 25 January 2012

OCA — Wed, 25 Jan 2012 06:01:40 GMT

←Older revision		Revision as of 06:01, 25 January 2012
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3v39 is ON HOLD	+	The entry 3v39 is ON HOLD until Paper Publication

	Authors: Lovering, A.L., Lerner, T.R., Sockett, R.E.		Authors: Lovering, A.L., Lerner, T.R., Sockett, R.E.

	Description: Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio bacteriovorus		Description: Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio bacteriovorus

OCA: Protected "3v39" [edit=sysop:move=sysop]

OCA — Wed, 28 Dec 2011 06:48:56 GMT

Protected "3v39" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:48, 28 December 2011

OCA: New page: '''Unreleased structure''' The entry 3v39 is ON HOLD Authors: Lovering, A.L., Lerner, T.R., Sockett, R.E. Description: Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio...

OCA — Wed, 28 Dec 2011 06:48:55 GMT

New page: '''Unreleased structure''' The entry 3v39 is ON HOLD Authors: Lovering, A.L., Lerner, T.R., Sockett, R.E. Description: Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio...

New page

'''Unreleased structure'''

The entry 3v39 is ON HOLD

Authors: Lovering, A.L., Lerner, T.R., Sockett, R.E.

Description: Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio bacteriovorus