3vgv - Revision history

OCA at 12:20, 8 November 2023

OCA — Wed, 08 Nov 2023 12:20:42 GMT

←Older revision		Revision as of 12:20, 8 November 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3vgv]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Halomonas_sp._#593 Halomonas sp. #593]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VGV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VGV FirstGlance]. <br>		<table><tr><td colspan='2'>[[3vgv]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Halomonas_sp._#593 Halomonas sp. #593]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VGV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VGV FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style='overflow: auto; max-height: 3em;'>[[3vgs\|3vgs]], [[3vgt\|3vgt]], [[3vgu\|3vgu]]</div></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.5Å</td></tr>
-	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">NDK ([https://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=~~5&~~id=195704 Halomonas sp.~~ #~~593])</td></tr>~~	+
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Nucleoside-diphosphate_kinase Nucleoside-diphosphate kinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.6 2.7.4.6] </span></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vgv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vgv OCA], [https://pdbe.org/3vgv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vgv RCSB], [https://www.ebi.ac.uk/pdbsum/3vgv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vgv ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vgv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vgv OCA], [https://pdbe.org/3vgv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vgv RCSB], [https://www.ebi.ac.uk/pdbsum/3vgv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vgv ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/Q83WH5_9GAMM Q83WH5_9GAMM]] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.[HAMAP-Rule:MF_00451]	+	[https://www.uniprot.org/uniprot/Q83WH5_9GAMM Q83WH5_9GAMM] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.[HAMAP-Rule:MF_00451]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 29:		Line 27:
	[[Category: Halomonas sp. #593]]		[[Category: Halomonas sp. #593]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Nucleoside-diphosphate kinase]]~~	+	[[Category: Arai S]]
-	[[Category: Arai, S]]	+	[[Category: Ishibashi M]]
-	[[Category: Ishibashi, M]]	+	[[Category: Kuroki R]]
-	[[Category: Kuroki, R]]	+	[[Category: Matsumoto F]]
-	[[Category: Matsumoto, F]]	+	[[Category: Okazaki N]]
-	[[Category: Okazaki, N]]	+	[[Category: Tamada T]]
-	[[Category: Tamada, T]]	+	[[Category: Tokunaga H]]
-	[[Category: Tokunaga, H]]	+	[[Category: Tokunaga M]]
-	[[Category: Tokunaga, M]]	+	[[Category: Yonezawa Y]]
-	[[Category: Yonezawa, Y]]	+
-	~~[[Category: Atp-binding]]~~	+
-	~~[[Category: Ferredoxin fold]]~~	+
-	~~[[Category: Halophilic]]~~	+
-	~~[[Category: Kinase]]~~	+
-	~~[[Category: Nucleotide-binding]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 18:45, 27 July 2022

OCA — Wed, 27 Jul 2022 18:45:01 GMT

←Older revision		Revision as of 18:45, 27 July 2022
Line 1:		Line 1:

	==E134A mutant nucleoside diphosphate kinase derived from Halomonas sp. 593==		==E134A mutant nucleoside diphosphate kinase derived from Halomonas sp. 593==
-	<StructureSection load='3vgv' size='340' side='right' caption='[[3vgv]], [[Resolution\|resolution]] 2.50Å' scene=''>	+	<StructureSection load='3vgv' size='340' side='right'caption='[[3vgv]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3vgv]] is a 16 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Halomonas_sp._#593 Halomonas sp. #593]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VGV OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3VGV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3vgv]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Halomonas_sp._#593 Halomonas sp. #593]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VGV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VGV FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3vgs\|3vgs]], [[3vgt\|3vgt]], [[3vgu\|3vgu]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3vgs\|3vgs]], [[3vgt\|3vgt]], [[3vgu\|3vgu]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NDK ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=195704 Halomonas sp. #593])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NDK ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=195704 Halomonas sp. #593])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Nucleoside-diphosphate_kinase Nucleoside-diphosphate kinase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.6 2.7.4.6] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Nucleoside-diphosphate_kinase Nucleoside-diphosphate kinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.6 2.7.4.6] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3vgv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vgv OCA], [~~http~~://pdbe.org/3vgv PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3vgv RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3vgv PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3vgv ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vgv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vgv OCA], [https://pdbe.org/3vgv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vgv RCSB], [https://www.ebi.ac.uk/pdbsum/3vgv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vgv ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/Q83WH5_9GAMM Q83WH5_9GAMM]] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.[HAMAP-Rule:MF_00451]	+	[[https://www.uniprot.org/uniprot/Q83WH5_9GAMM Q83WH5_9GAMM]] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.[HAMAP-Rule:MF_00451]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 22:		Line 22:

	==See Also==		==See Also==
-	*[[Nucleoside diphosphate kinase\|Nucleoside diphosphate kinase]]	+	*[[Nucleoside diphosphate kinase 3D structures\|Nucleoside diphosphate kinase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 28:		Line 28:
	</StructureSection>		</StructureSection>
	[[Category: Halomonas sp. #593]]		[[Category: Halomonas sp. #593]]
		+	[[Category: Large Structures]]
	[[Category: Nucleoside-diphosphate kinase]]		[[Category: Nucleoside-diphosphate kinase]]
	[[Category: Arai, S]]		[[Category: Arai, S]]

OCA at 19:40, 4 August 2016

OCA — Thu, 04 Aug 2016 19:40:52 GMT

←Older revision		Revision as of 19:40, 4 August 2016
Line 1:		Line 1:
		+
	==E134A mutant nucleoside diphosphate kinase derived from Halomonas sp. 593==		==E134A mutant nucleoside diphosphate kinase derived from Halomonas sp. 593==
	<StructureSection load='3vgv' size='340' side='right' caption='[[3vgv]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='3vgv' size='340' side='right' caption='[[3vgv]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3vgv]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Halomonas ~~Halomonas~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VGV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VGV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3vgv]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Halomonas_sp._#593 Halomonas sp. #593]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VGV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VGV FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3vgs\|3vgs]], [[3vgt\|3vgt]], [[3vgu\|3vgu]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3vgs\|3vgs]], [[3vgt\|3vgt]], [[3vgu\|3vgu]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NDK ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~2745~~ Halomonas])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NDK ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=195704 Halomonas sp. #593])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nucleoside-diphosphate_kinase Nucleoside-diphosphate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.6 2.7.4.6] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nucleoside-diphosphate_kinase Nucleoside-diphosphate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.6 2.7.4.6] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vgv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vgv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vgv RCSB], [http://www.ebi.ac.uk/pdbsum/3vgv PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vgv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vgv OCA], [http://pdbe.org/3vgv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3vgv RCSB], [http://www.ebi.ac.uk/pdbsum/3vgv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3vgv ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 18:		Line 19:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3vgv" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 25:		Line 27:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Halomonas]]	+	[[Category: Halomonas sp. #593]]
	[[Category: Nucleoside-diphosphate kinase]]		[[Category: Nucleoside-diphosphate kinase]]
	[[Category: Arai, S]]		[[Category: Arai, S]]

OCA at 18:53, 24 December 2014

OCA — Wed, 24 Dec 2014 18:53:31 GMT

←Older revision		Revision as of 18:53, 24 December 2014
Line 1:		Line 1:
-	[[~~Image:~~3vgv.~~jpg~~\|~~left~~\|~~200px~~]]	+	==E134A mutant nucleoside diphosphate kinase derived from Halomonas sp. 593==
		+	<StructureSection load='3vgv' size='340' side='right' caption='[[3vgv]], [[Resolution\|resolution]] 2.50Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3vgv]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Halomonas Halomonas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VGV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VGV FirstGlance]. <br>
		+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3vgs\|3vgs]], [[3vgt\|3vgt]], [[3vgu\|3vgu]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NDK ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2745 Halomonas])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nucleoside-diphosphate_kinase Nucleoside-diphosphate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.6 2.7.4.6] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vgv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vgv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vgv RCSB], [http://www.ebi.ac.uk/pdbsum/3vgv PDBsum]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/Q83WH5_9GAMM Q83WH5_9GAMM]] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.[HAMAP-Rule:MF_00451]
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Nucleoside diphosphate kinase (NDK) is known to form homotetramers or homohexamers. To clarify the oligomer state of NDK from moderately halophilic Halomonas sp. 593 (HaNDK), the oligomeric state of HaNDK was characterized by light scattering followed by X-ray crystallography. The molecular weight of HaNDK is 33,660, and the X-ray crystal structure determination to 2.3 and 2.7 A resolution showed a dimer form which was confirmed in the different space groups of R3 and C2 with an independent packing arrangement. This is the first structural evidence that HaNDK forms a dimeric assembly. Moreover, the inferred molecular mass of a mutant HaNDK (E134A) indicated 62.1-65.3 kDa, and the oligomerization state was investigated by X-ray crystallography to 2.3 and 2.5 A resolution with space groups of P2(1) and C2. The assembly form of the E134A mutant HaNDK was identified as a Type I tetramer as found in Myxococcus NDK. The structural comparison between the wild-type and E134A mutant HaNDKs suggests that the change from dimer to tetramer is due to the removal of negative charge repulsion caused by the E134 in the wild-type HaNDK. The higher ordered association of proteins usually contributes to an increase in thermal stability and substrate affinity. The change in the assembly form by a minimum mutation may be an effective way for NDK to acquire molecular characteristics suited to various circumstances.

-	~~{{STRUCTURE_3vgv\| PDB=3vgv \| SCENE= }}~~	+	A structural mechanism for dimeric to tetrameric oligomer conversion in Halomonas sp. nucleoside diphosphate kinase.,Arai S, Yonezawa Y, Okazaki N, Matsumoto F, Tamada T, Tokunaga H, Ishibashi M, Blaber M, Tokunaga M, Kuroki R Protein Sci. 2012 Apr;21(4):498-510. doi: 10.1002/pro.2032. Epub 2012 Mar 9. PMID:22275000<ref>PMID:22275000</ref>

-	~~===E134A mutant nucleoside diphosphate kinase derived from Halomonas sp~~. ~~593===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>

-	~~{{ABSTRACT_PUBMED_22275000}}~~	+	==See Also==
-		+	*[[Nucleoside diphosphate kinase\|Nucleoside diphosphate kinase]]
-	==~~About this Structure~~==	+	== References ==
-	[[~~3vgv~~]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Halomonas Halomonas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VGV OCA].	+	<references/>
-		+	__TOC__
-	==~~Reference~~==	+	</StructureSection>
-	<~~ref group="xtra">PMID:022275000<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Halomonas]]		[[Category: Halomonas]]
	[[Category: Nucleoside-diphosphate kinase]]		[[Category: Nucleoside-diphosphate kinase]]
-	[[Category: Arai, S.]]	+	[[Category: Arai, S]]
-	[[Category: Ishibashi, M.]]	+	[[Category: Ishibashi, M]]
-	[[Category: Kuroki, R.]]	+	[[Category: Kuroki, R]]
-	[[Category: Matsumoto, F.]]	+	[[Category: Matsumoto, F]]
-	[[Category: Okazaki, N.]]	+	[[Category: Okazaki, N]]
-	[[Category: Tamada, T.]]	+	[[Category: Tamada, T]]
-	[[Category: Tokunaga, H.]]	+	[[Category: Tokunaga, H]]
-	[[Category: Tokunaga, M.]]	+	[[Category: Tokunaga, M]]
-	[[Category: Yonezawa, Y.]]	+	[[Category: Yonezawa, Y]]
	[[Category: Atp-binding]]		[[Category: Atp-binding]]
	[[Category: Ferredoxin fold]]		[[Category: Ferredoxin fold]]

OCA at 08:13, 11 July 2012

OCA — Wed, 11 Jul 2012 08:13:03 GMT

←Older revision		Revision as of 08:13, 11 July 2012
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3vgv.jpg\|left\|200px]]

-	~~The entry~~ 3vgv ~~is ON HOLD~~ ~~until Paper Publication~~	+	{{STRUCTURE_3vgv\| PDB=3vgv \| SCENE= }}

-	~~Authors: Okazaki, N., Yonezawa, Y., Arai, S., Matsumoto, F., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R~~.	+	===E134A mutant nucleoside diphosphate kinase derived from Halomonas sp. 593===

-	~~Description~~: ~~E134A mutant nucleoside diphosphate kinase derived~~ from Halomonas sp. ~~593~~	+	{{ABSTRACT_PUBMED_22275000}}
		+
		+	==About this Structure==
		+	[[3vgv]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Halomonas Halomonas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VGV OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:022275000</ref><references group="xtra"/>
		+	[[Category: Halomonas]]
		+	[[Category: Nucleoside-diphosphate kinase]]
		+	[[Category: Arai, S.]]
		+	[[Category: Ishibashi, M.]]
		+	[[Category: Kuroki, R.]]
		+	[[Category: Matsumoto, F.]]
		+	[[Category: Okazaki, N.]]
		+	[[Category: Tamada, T.]]
		+	[[Category: Tokunaga, H.]]
		+	[[Category: Tokunaga, M.]]
		+	[[Category: Yonezawa, Y.]]
		+	[[Category: Atp-binding]]
		+	[[Category: Ferredoxin fold]]
		+	[[Category: Halophilic]]
		+	[[Category: Kinase]]
		+	[[Category: Nucleotide-binding]]
		+	[[Category: Transferase]]

OCA at 08:56, 30 October 2011

OCA — Sun, 30 Oct 2011 08:56:59 GMT

←Older revision		Revision as of 08:56, 30 October 2011
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3vgv is ON HOLD	+	The entry 3vgv is ON HOLD until Paper Publication

	Authors: Okazaki, N., Yonezawa, Y., Arai, S., Matsumoto, F., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R.		Authors: Okazaki, N., Yonezawa, Y., Arai, S., Matsumoto, F., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R.

	Description: E134A mutant nucleoside diphosphate kinase derived from Halomonas sp. 593		Description: E134A mutant nucleoside diphosphate kinase derived from Halomonas sp. 593

OCA at 05:52, 7 September 2011

OCA — Wed, 07 Sep 2011 05:52:42 GMT

←Older revision		Revision as of 05:52, 7 September 2011
Line 5:		Line 5:
	Authors: Okazaki, N., Yonezawa, Y., Arai, S., Matsumoto, F., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R.		Authors: Okazaki, N., Yonezawa, Y., Arai, S., Matsumoto, F., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R.

-	Description: E134A ~~MUTANT NUCLEOSIDE DIPHOSPHATE KINASE DERIVED FROM HALOMONAS SP~~. 593	+	Description: E134A mutant nucleoside diphosphate kinase derived from Halomonas sp. 593

OCA: Protected "3vgv" [edit=sysop:move=sysop]

OCA — Wed, 31 Aug 2011 06:27:58 GMT

Protected "3vgv" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:27, 31 August 2011

OCA: New page: '''Unreleased structure''' The entry 3vgv is ON HOLD Authors: Okazaki, N., Yonezawa, Y., Arai, S., Matsumoto, F., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R. Desc...

OCA — Wed, 31 Aug 2011 06:27:57 GMT

New page: '''Unreleased structure''' The entry 3vgv is ON HOLD Authors: Okazaki, N., Yonezawa, Y., Arai, S., Matsumoto, F., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R. Desc...

New page

'''Unreleased structure'''

The entry 3vgv is ON HOLD

Authors: Okazaki, N., Yonezawa, Y., Arai, S., Matsumoto, F., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R.

Description: E134A MUTANT NUCLEOSIDE DIPHOSPHATE KINASE DERIVED FROM HALOMONAS SP. 593