3vo2 - Revision history

OCA at 12:29, 8 November 2023

OCA — Wed, 08 Nov 2023 12:29:49 GMT

←Older revision		Revision as of 12:29, 8 November 2023
Line 3:		Line 3:
	<StructureSection load='3vo2' size='340' side='right'caption='[[3vo2]], [[Resolution\|resolution]] 1.39Å' scene=''>		<StructureSection load='3vo2' size='340' side='right'caption='[[3vo2]], [[Resolution\|resolution]] 1.39Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3vo2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Maize Maize~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VO2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VO2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3vo2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Zea_mays Zea mays]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VO2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VO2 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=FAD:FLAVIN~~-~~ADENINE+DINUCLEOTIDE'>FAD</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.39Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style='overflow: auto; max-height: 3em;'>[[1gaw\|1gaw]], [[3vo1\|3vo1]]</div></td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
-	~~<tr~~ id~~='activity'><td class~~="~~sblockLbl~~"><~~b>Activity:</b></td><td class~~=~~"sblockDat"><span class~~=~~'plainlinks'>[https~~:~~//en.wikipedia.org/wiki/Ferredoxin~~-~~-NADP(~~+~~)_reductase Ferredoxin--NADP(+) reductase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2]~~ </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vo2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vo2 OCA], [https://pdbe.org/3vo2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vo2 RCSB], [https://www.ebi.ac.uk/pdbsum/3vo2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vo2 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vo2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vo2 OCA], [https://pdbe.org/3vo2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vo2 RCSB], [https://www.ebi.ac.uk/pdbsum/3vo2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vo2 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/B4FUM2_MAIZE B4FUM2_MAIZE]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 23:		Line 24:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Maize~~]]	+	[[Category: Zea mays]]
-	[[Category: Hase, T]]	+	[[Category: Hase T]]
-	[[Category: Kurisu, G]]	+	[[Category: Kurisu G]]
-	[[Category: Muraki, N]]	+	[[Category: Muraki N]]
-	~~[[Category: Fad binding]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: Rossmann fold~~]]	+

OCA at 18:55, 27 July 2022

OCA — Wed, 27 Jul 2022 18:55:10 GMT

←Older revision		Revision as of 18:55, 27 July 2022
Line 1:		Line 1:

	==Crystal structure of Zea mays leaf ferredoxin-NADP+ reductase III==		==Crystal structure of Zea mays leaf ferredoxin-NADP+ reductase III==
-	<StructureSection load='3vo2' size='340' side='right' caption='[[3vo2]], [[Resolution\|resolution]] 1.39Å' scene=''>	+	<StructureSection load='3vo2' size='340' side='right'caption='[[3vo2]], [[Resolution\|resolution]] 1.39Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3vo2]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Maize Maize]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VO2 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3VO2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3vo2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Maize Maize]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VO2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VO2 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1gaw\|1gaw]], [[3vo1\|3vo1]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1gaw\|1gaw]], [[3vo1\|3vo1]]</div></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3vo2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vo2 OCA], [~~http~~://pdbe.org/3vo2 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3vo2 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3vo2 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3vo2 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vo2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vo2 OCA], [https://pdbe.org/3vo2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vo2 RCSB], [https://www.ebi.ac.uk/pdbsum/3vo2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vo2 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 22:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Maize]]		[[Category: Maize]]
	[[Category: Hase, T]]		[[Category: Hase, T]]

OCA at 19:00, 10 December 2016

OCA — Sat, 10 Dec 2016 19:00:52 GMT

←Older revision		Revision as of 19:00, 10 December 2016
Line 1:		Line 1:
		+
	==Crystal structure of Zea mays leaf ferredoxin-NADP+ reductase III==		==Crystal structure of Zea mays leaf ferredoxin-NADP+ reductase III==
	<StructureSection load='3vo2' size='340' side='right' caption='[[3vo2]], [[Resolution\|resolution]] 1.39Å' scene=''>		<StructureSection load='3vo2' size='340' side='right' caption='[[3vo2]], [[Resolution\|resolution]] 1.39Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3vo2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Zea_mays Zea mays~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VO2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VO2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3vo2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Maize Maize]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VO2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VO2 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1gaw\|1gaw]], [[3vo1\|3vo1]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1gaw\|1gaw]], [[3vo1\|3vo1]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vo2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vo2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vo2 RCSB], [http://www.ebi.ac.uk/pdbsum/3vo2 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vo2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vo2 OCA], [http://pdbe.org/3vo2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3vo2 RCSB], [http://www.ebi.ac.uk/pdbsum/3vo2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3vo2 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 16:		Line 17:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3vo2" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Zea mays~~]]	+	[[Category: Maize]]
	[[Category: Hase, T]]		[[Category: Hase, T]]
	[[Category: Kurisu, G]]		[[Category: Kurisu, G]]

OCA at 16:38, 9 December 2014

OCA — Tue, 09 Dec 2014 16:38:05 GMT

←Older revision		Revision as of 16:38, 9 December 2014
Line 1:		Line 1:
-	[[~~Image:~~3vo2.~~jpg~~\|~~left~~\|~~200px~~]]	+	==Crystal structure of Zea mays leaf ferredoxin-NADP+ reductase III==
		+	<StructureSection load='3vo2' size='340' side='right' caption='[[3vo2]], [[Resolution\|resolution]] 1.39Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3vo2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Zea_mays Zea mays]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VO2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VO2 FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1gaw\|1gaw]], [[3vo1\|3vo1]]</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vo2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vo2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vo2 RCSB], [http://www.ebi.ac.uk/pdbsum/3vo2 PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	To adapt to different light intensities, photosynthetic organisms manipulate the flow of electrons through several alternative pathways at the thylakoid membrane. The enzyme ferredoxin:NADP(+) reductase (FNR) has the potential to regulate this electron partitioning because it is integral to most of these electron cascades and can associate with several different membrane complexes. However, the factors controlling relative localization of FNR to different membrane complexes have not yet been established. Maize (Zea mays) contains three chloroplast FNR proteins with totally different membrane association, and we found that these proteins have variable distribution between cells conducting predominantly cyclic electron transport (bundle sheath) and linear electron transport (mesophyll). Here, the crystal structures of all three enzymes were solved, revealing major structural differences at the N-terminal domain and dimer interface. Expression in Arabidopsis thaliana of maize FNRs as chimeras and truncated proteins showed the N-terminal determines recruitment of FNR to different membrane complexes. In addition, the different maize FNR proteins localized to different thylakoid membrane complexes on expression in Arabidopsis, and analysis of chlorophyll fluorescence and photosystem I absorbance demonstrates the impact of FNR location on photosynthetic electron flow.

-	~~{{STRUCTURE_3vo2\| PDB=3vo2 \| SCENE= }}~~	+	N-terminal structure of maize ferredoxin:NADP+ reductase determines recruitment into different thylakoid membrane complexes.,Twachtmann M, Altmann B, Muraki N, Voss I, Okutani S, Kurisu G, Hase T, Hanke GT Plant Cell. 2012 Jul;24(7):2979-91. doi: 10.1105/tpc.111.094532. Epub 2012 Jul, 17. PMID:22805436<ref>PMID:22805436</ref>

-	~~===Crystal structure~~ of ~~Zea mays leaf ferredoxin-NADP+ reductase III===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_22805436}}~~	+	== References ==
-		+	<references/>
-	==~~About this Structure~~==	+	__TOC__
-	~~[[3vo2]] is a 2 chain structure with sequence from [http:~~//~~en.wikipedia.org/wiki/Zea_mays Zea mays]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VO2 OCA].~~	+	</StructureSection>
	[[Category: Zea mays]]		[[Category: Zea mays]]
-	[[Category: Hase, T.]]	+	[[Category: Hase, T]]
-	[[Category: Kurisu, G.]]	+	[[Category: Kurisu, G]]
-	[[Category: Muraki, N.]]	+	[[Category: Muraki, N]]
	[[Category: Fad binding]]		[[Category: Fad binding]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]
	[[Category: Rossmann fold]]		[[Category: Rossmann fold]]

OCA at 10:52, 5 December 2012

OCA — Wed, 05 Dec 2012 10:52:58 GMT

←Older revision		Revision as of 10:52, 5 December 2012
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3vo2.jpg\|left\|200px]]

-	~~The entry~~ 3vo2 ~~is ON HOLD~~ ~~until Paper Publication~~	+	{{STRUCTURE_3vo2\| PDB=3vo2 \| SCENE= }}

-	~~Authors: Muraki, N., Hase, T., Kurisu, G.~~	+	===Crystal structure of Zea mays leaf ferredoxin-NADP+ reductase III===

-	~~Description: Crystal~~ structure of Zea mays ~~leaf ferredoxin~~-~~NADP+ reductase III~~	+	{{ABSTRACT_PUBMED_22805436}}
		+
		+	==About this Structure==
		+	[[3vo2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Zea_mays Zea mays]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VO2 OCA].
		+	[[Category: Zea mays]]
		+	[[Category: Hase, T.]]
		+	[[Category: Kurisu, G.]]
		+	[[Category: Muraki, N.]]
		+	[[Category: Fad binding]]
		+	[[Category: Oxidoreductase]]
		+	[[Category: Rossmann fold]]

OCA at 06:06, 8 February 2012

OCA — Wed, 08 Feb 2012 06:06:35 GMT

←Older revision		Revision as of 06:06, 8 February 2012
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3vo2 is ON HOLD	+	The entry 3vo2 is ON HOLD until Paper Publication

	Authors: Muraki, N., Hase, T., Kurisu, G.		Authors: Muraki, N., Hase, T., Kurisu, G.

	Description: Crystal structure of Zea mays leaf ferredoxin-NADP+ reductase III		Description: Crystal structure of Zea mays leaf ferredoxin-NADP+ reductase III

OCA at 06:54, 1 February 2012

OCA — Wed, 01 Feb 2012 06:54:56 GMT

←Older revision		Revision as of 06:54, 1 February 2012
Line 3:		Line 3:
	The entry 3vo2 is ON HOLD		The entry 3vo2 is ON HOLD

-	Authors: Muraki, N, Hase, T, Kurisu, G	+	Authors: Muraki, N., Hase, T., Kurisu, G.

	Description: Crystal structure of Zea mays leaf ferredoxin-NADP+ reductase III		Description: Crystal structure of Zea mays leaf ferredoxin-NADP+ reductase III

OCA: Protected "3vo2" [edit=sysop:move=sysop]

OCA — Wed, 25 Jan 2012 06:06:04 GMT

Protected "3vo2" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:06, 25 January 2012

OCA: New page: '''Unreleased structure''' The entry 3vo2 is ON HOLD Authors: Muraki, N, Hase, T, Kurisu, G Description: Crystal structure of Zea mays leaf ferredoxin-NADP+ reductase III

OCA — Wed, 25 Jan 2012 06:06:03 GMT

New page: '''Unreleased structure''' The entry 3vo2 is ON HOLD Authors: Muraki, N, Hase, T, Kurisu, G Description: Crystal structure of Zea mays leaf ferredoxin-NADP+ reductase III

New page

'''Unreleased structure'''

The entry 3vo2 is ON HOLD

Authors: Muraki, N, Hase, T, Kurisu, G

Description: Crystal structure of Zea mays leaf ferredoxin-NADP+ reductase III