3vrc - Revision history

OCA at 12:34, 8 November 2023

OCA — Wed, 08 Nov 2023 12:34:02 GMT

←Older revision		Revision as of 12:34, 8 November 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3vrc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VRC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VRC FirstGlance]. <br>		<table><tr><td colspan='2'>[[3vrc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VRC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VRC FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene~~></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1Å</td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3vrd\|3vrd]]</div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vrc OCA], [https://pdbe.org/3vrc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vrc RCSB], [https://www.ebi.ac.uk/pdbsum/3vrc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vrc ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vrc OCA], [https://pdbe.org/3vrc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vrc RCSB], [https://www.ebi.ac.uk/pdbsum/3vrc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vrc ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/C7G528_THETI C7G528_THETI]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Thermochromatium tepidum]]		[[Category: Thermochromatium tepidum]]
-	[[Category: Hirano, Y]]	+	[[Category: Hirano Y]]
-	[[Category: Kimura, Y]]	+	[[Category: Kimura Y]]
-	[[Category: Miki, K]]	+	[[Category: Miki K]]
-	[[Category: Suzuki, H]]	+	[[Category: Suzuki H]]
-	[[Category: Wang, Z Y]]	+	[[Category: Wang Z-Y]]
-	~~[[Category: C-type cytpchrome]]~~	+
-	~~[[Category: Electron transport~~]]	+

OCA at 18:59, 27 July 2022

OCA — Wed, 27 Jul 2022 18:59:48 GMT

←Older revision		Revision as of 18:59, 27 July 2022
Line 3:		Line 3:
	<StructureSection load='3vrc' size='340' side='right'caption='[[3vrc]], [[Resolution\|resolution]] 1.00Å' scene=''>		<StructureSection load='3vrc' size='340' side='right'caption='[[3vrc]], [[Resolution\|resolution]] 1.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3vrc]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VRC OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3VRC FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3vrc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VRC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VRC FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3vrd\|3vrd]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3vrd\|3vrd]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3vrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vrc OCA], [~~http~~://pdbe.org/3vrc PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3vrc RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3vrc PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3vrc ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vrc OCA], [https://pdbe.org/3vrc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vrc RCSB], [https://www.ebi.ac.uk/pdbsum/3vrc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vrc ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 16:17, 28 August 2019

OCA — Wed, 28 Aug 2019 16:17:32 GMT

←Older revision		Revision as of 16:17, 28 August 2019
Line 1:		Line 1:

	==Crystal structure of cytochrome c' from Thermochromatium tepidum==		==Crystal structure of cytochrome c' from Thermochromatium tepidum==
-	<StructureSection load='3vrc' size='340' side='right' caption='[[3vrc]], [[Resolution\|resolution]] 1.00Å' scene=''>	+	<StructureSection load='3vrc' size='340' side='right'caption='[[3vrc]], [[Resolution\|resolution]] 1.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3vrc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VRC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VRC FirstGlance]. <br>		<table><tr><td colspan='2'>[[3vrc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VRC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VRC FirstGlance]. <br>
Line 17:		Line 17:
	</div>		</div>
	<div class="pdbe-citations 3vrc" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 3vrc" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Cytochrome C 3D structures\|Cytochrome C 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Thermochromatium tepidum]]		[[Category: Thermochromatium tepidum]]
	[[Category: Hirano, Y]]		[[Category: Hirano, Y]]

OCA at 07:57, 22 November 2017

OCA — Wed, 22 Nov 2017 07:57:13 GMT

←Older revision		Revision as of 07:57, 22 November 2017
Line 17:		Line 17:
	</div>		</div>
	<div class="pdbe-citations 3vrc" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 3vrc" style="background-color:#fffaf0;"></div>
-
-	==See Also==
-	*[[Cytochrome c\|Cytochrome c]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 19:35, 11 August 2016

OCA — Thu, 11 Aug 2016 19:35:07 GMT

←Older revision		Revision as of 19:35, 11 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of cytochrome c' from Thermochromatium tepidum==		==Crystal structure of cytochrome c' from Thermochromatium tepidum==
	<StructureSection load='3vrc' size='340' side='right' caption='[[3vrc]], [[Resolution\|resolution]] 1.00Å' scene=''>		<StructureSection load='3vrc' size='340' side='right' caption='[[3vrc]], [[Resolution\|resolution]] 1.00Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3vrd\|3vrd]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3vrd\|3vrd]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vrc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vrc RCSB], [http://www.ebi.ac.uk/pdbsum/3vrc PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vrc OCA], [http://pdbe.org/3vrc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3vrc RCSB], [http://www.ebi.ac.uk/pdbsum/3vrc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3vrc ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 15:		Line 16:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3vrc" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==

OCA at 09:10, 4 January 2015

OCA — Sun, 04 Jan 2015 09:10:11 GMT

←Older revision		Revision as of 09:10, 4 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3vrc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VRC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VRC FirstGlance]. <br>		<table><tr><td colspan='2'>[[3vrc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VRC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VRC FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3vrd\|3vrd]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3vrd\|3vrd]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vrc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vrc RCSB], [http://www.ebi.ac.uk/pdbsum/3vrc PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vrc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vrc RCSB], [http://www.ebi.ac.uk/pdbsum/3vrc PDBsum]</span></td></tr>
-	<table>	+	</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 23:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Thermochromatium tepidum]]		[[Category: Thermochromatium tepidum]]
-	[[Category: Hirano, Y.]]	+	[[Category: Hirano, Y]]
-	[[Category: Kimura, Y.]]	+	[[Category: Kimura, Y]]
-	[[Category: Miki, K.]]	+	[[Category: Miki, K]]
-	[[Category: Suzuki, H.]]	+	[[Category: Suzuki, H]]
-	[[Category: Wang, Z Y.]]	+	[[Category: Wang, Z Y]]
	[[Category: C-type cytpchrome]]		[[Category: C-type cytpchrome]]
	[[Category: Electron transport]]		[[Category: Electron transport]]

OCA at 10:21, 16 June 2014

OCA — Mon, 16 Jun 2014 10:21:36 GMT

←Older revision		Revision as of 10:21, 16 June 2014
Line 1:		Line 1:
-	[[~~Image:~~3vrc.~~jpg~~\|~~left~~\|~~200px~~]]	+	==Crystal structure of cytochrome c' from Thermochromatium tepidum==
		+	<StructureSection load='3vrc' size='340' side='right' caption='[[3vrc]], [[Resolution\|resolution]] 1.00Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3vrc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VRC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VRC FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3vrd\|3vrd]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vrc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vrc RCSB], [http://www.ebi.ac.uk/pdbsum/3vrc PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The thermodynamic and spectroscopic properties of two soluble electron transport proteins, cytochrome (Cyt) c' and flavocytochrome c, isolated from thermophilic purple sulfur bacterium Thermochromatium (Tch.) tepidum were examined and compared with those of the corresponding proteins from a closely related mesophilic bacterium Allochromatium (Alc.) vinosum. These proteins share sequence identities of 82% for the cytochromes c' and 86% for the flavocytochromes c. Crystal structures of the two proteins have been determined at high resolutions. Differential scanning calorimetry and denaturing experiments show that both proteins from Tch. tepidum are thermally and structurally much more stable than their mesophilic counterparts. The denaturation temperature of Tch. tepidum Cyt c' was 22 degrees C higher than that of Alc. vinosum Cyt c', and the midpoints of denaturation using guanidine hydrochloride were 2.0 and 1.2 M for the Tch. tepidum and Alc. vinosum flavocytochromes c, respectively. The enhanced stabilities can be interpreted on the basis of the structural and sequence information obtained in this study: increased number of hydrogen bonds formed between main chain nitrogen and oxygen atoms, more compact structures and reduced number of glycine residues. Many residues with large side chains in Alc. vinosum Cyt c' are substituted by alanines in Tch. tepidum Cyt c'. Both proteins from Tch. tepidum exhibit high structural similarities to their counterparts from Alc. vinosum, and the different residues between the corresponding proteins are mainly located on the surface and exposed to the solvent. Water molecules are found in the heme vicinity of Tch. tepidum Cyt c' and form hydrogen bonds with the heme ligand and C-terminal charged residues. Similar bound waters are also found in the vicinity of one heme group in the diheme subunit of Tch. tepidum flavocytochrome c. Electron density map of the Tch. tepidum flavocytochrome c clearly revealed the presence of disulfur atoms positioned between two cysteine residues at the active site near the FAD prosthetic group. The result strongly suggests that flavocytochrome c is involved in the sulfide oxidation in vivo. Detailed discussion is given on the relationships between the crystal structures and the spectroscopic properties observed for these proteins.

-	~~{{STRUCTURE_3vrc\| PDB=3vrc \| SCENE= }}~~	+	Structure Analysis and Comparative Characterization of the Cytochrome c' and Flavocytochrome c from Thermophilic Purple Photosynthetic Bacterium Thermochromatium tepidum.,Hirano Y, Kimura Y, Suzuki H, Miki K, Wang ZY Biochemistry. 2012 Aug 21;51(33):6556-67. Epub 2012 Aug 9. PMID:22827326<ref>PMID:22827326</ref>

-	~~===Crystal structure~~ of ~~cytochrome c' from Thermochromatium tepidum===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>

-	~~{{ABSTRACT_PUBMED_22827326}}~~	+	==See Also==
-		+	*[[Cytochrome c\|Cytochrome c]]
-	==~~About this Structure~~==	+	== References ==
-	[[~~3vrc~~]] ~~is a 2 chain structure with sequence from [http:~~//~~en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VRC OCA].~~	+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Thermochromatium tepidum]]		[[Category: Thermochromatium tepidum]]
	[[Category: Hirano, Y.]]		[[Category: Hirano, Y.]]

OCA at 05:12, 12 September 2012

OCA — Wed, 12 Sep 2012 05:12:21 GMT

←Older revision		Revision as of 05:12, 12 September 2012
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3vrc.jpg\|left\|200px]]

-	~~The entry~~ 3vrc ~~is ON HOLD~~ ~~until Paper Publication~~	+	{{STRUCTURE_3vrc\| PDB=3vrc \| SCENE= }}

-	~~Authors: Hirano, Y., Kimura, Y., Suzuki, H., Miki, K., Wang, Z.-Y.~~	+	===Crystal structure of cytochrome c' from Thermochromatium tepidum===

-	~~Description: Crystal~~ structure ~~of cytochrome c'~~ from Thermochromatium tepidum	+	{{ABSTRACT_PUBMED_22827326}}
		+
		+	==About this Structure==
		+	[[3vrc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermochromatium_tepidum Thermochromatium tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VRC OCA].
		+	[[Category: Thermochromatium tepidum]]
		+	[[Category: Hirano, Y.]]
		+	[[Category: Kimura, Y.]]
		+	[[Category: Miki, K.]]
		+	[[Category: Suzuki, H.]]
		+	[[Category: Wang, Z Y.]]
		+	[[Category: C-type cytpchrome]]
		+	[[Category: Electron transport]]

OCA at 08:39, 16 May 2012

OCA — Wed, 16 May 2012 08:39:23 GMT

←Older revision		Revision as of 08:39, 16 May 2012
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3vrc is ON HOLD	+	The entry 3vrc is ON HOLD until Paper Publication

	Authors: Hirano, Y., Kimura, Y., Suzuki, H., Miki, K., Wang, Z.-Y.		Authors: Hirano, Y., Kimura, Y., Suzuki, H., Miki, K., Wang, Z.-Y.

	Description: Crystal structure of cytochrome c' from Thermochromatium tepidum		Description: Crystal structure of cytochrome c' from Thermochromatium tepidum

OCA: Protected "3vrc" [edit=sysop:move=sysop]

OCA — Wed, 18 Apr 2012 07:22:25 GMT

Protected "3vrc" [edit=sysop:move=sysop]

←Older revision

Revision as of 07:22, 18 April 2012