3vya - Revision history

OCA at 12:41, 8 November 2023

OCA — Wed, 08 Nov 2023 12:41:37 GMT

←Older revision		Revision as of 12:41, 8 November 2023
Line 3:		Line 3:
	<StructureSection load='3vya' size='340' side='right'caption='[[3vya]], [[Resolution\|resolution]] 2.40Å' scene=''>		<StructureSection load='3vya' size='340' side='right'caption='[[3vya]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3vya]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Desvm Desvm~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VYA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VYA FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3vya]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._'Miyazaki_F' Desulfovibrio vulgaris str. 'Miyazaki F']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VYA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VYA FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.4Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style~~=~~'overflow: auto; max-height: 3em;'~~>~~[[1flm\|1flm]], [[3vy2\|3vy2]], [[3vy5\|3vy5]], [[2e83\|2e83]]~~<~~/div></td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
-	~~<tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">DvMF_2023 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=883 DESVM])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vya FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vya OCA], [https://pdbe.org/3vya PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vya RCSB], [https://www.ebi.ac.uk/pdbsum/3vya PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vya ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vya FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vya OCA], [https://pdbe.org/3vya PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vya RCSB], [https://www.ebi.ac.uk/pdbsum/3vya PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vya ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/FMNB_DESVM FMNB_DESVM]] Functions as a redox protein with a potential of -325 mV.	+	[https://www.uniprot.org/uniprot/FMNB_DESVM FMNB_DESVM] Functions as a redox protein with a potential of -325 mV.
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Desvm~~]]	+	[[Category: Desulfovibrio vulgaris str. 'Miyazaki F']]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Kitamura, M]]	+	[[Category: Kitamura M]]
-	[[Category: Nakanishi, T]]	+	[[Category: Nakanishi T]]
-	[[Category: Takagi, R]]	+	[[Category: Takagi R]]
-	~~[[Category: Electron transport~~]]	+

OCA at 19:09, 27 July 2022

OCA — Wed, 27 Jul 2022 19:09:58 GMT

←Older revision		Revision as of 19:09, 27 July 2022
Line 1:		Line 1:

	==W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)==		==W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)==
-	<StructureSection load='3vya' size='340' side='right' caption='[[3vya]], [[Resolution\|resolution]] 2.40Å' scene=''>	+	<StructureSection load='3vya' size='340' side='right'caption='[[3vya]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3vya]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Desvm Desvm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VYA OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3VYA FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3vya]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desvm Desvm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VYA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VYA FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1flm\|1flm]], [[3vy2\|3vy2]], [[3vy5\|3vy5]], [[2e83\|2e83]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1flm\|1flm]], [[3vy2\|3vy2]], [[3vy5\|3vy5]], [[2e83\|2e83]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">DvMF_2023 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=883 DESVM])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">DvMF_2023 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=883 DESVM])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3vya FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vya OCA], [~~http~~://pdbe.org/3vya PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3vya RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3vya PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3vya ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vya FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vya OCA], [https://pdbe.org/3vya PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vya RCSB], [https://www.ebi.ac.uk/pdbsum/3vya PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vya ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/FMNB_DESVM FMNB_DESVM]] Functions as a redox protein with a potential of -325 mV.	+	[[https://www.uniprot.org/uniprot/FMNB_DESVM FMNB_DESVM]] Functions as a redox protein with a potential of -325 mV.
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Desvm]]		[[Category: Desvm]]
		+	[[Category: Large Structures]]
	[[Category: Kitamura, M]]		[[Category: Kitamura, M]]
	[[Category: Nakanishi, T]]		[[Category: Nakanishi, T]]
	[[Category: Takagi, R]]		[[Category: Takagi, R]]
	[[Category: Electron transport]]		[[Category: Electron transport]]

OCA at 07:40, 11 August 2016

OCA — Thu, 11 Aug 2016 07:40:48 GMT

←Older revision		Revision as of 07:40, 11 August 2016
Line 1:		Line 1:
		+
	==W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)==		==W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)==
	<StructureSection load='3vya' size='340' side='right' caption='[[3vya]], [[Resolution\|resolution]] 2.40Å' scene=''>		<StructureSection load='3vya' size='340' side='right' caption='[[3vya]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3vya]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Desulfovibrio_vulgaris_str._'miyazaki_f' Desulfovibrio vulgaris str. 'miyazaki f'~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VYA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VYA FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3vya]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desvm Desvm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VYA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VYA FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1flm\|1flm]], [[3vy2\|3vy2]], [[3vy5\|3vy5]], [[2e83\|2e83]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1flm\|1flm]], [[3vy2\|3vy2]], [[3vy5\|3vy5]], [[2e83\|2e83]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">DvMF_2023 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=883 ~~Desulfovibrio vulgaris str. 'Miyazaki F'~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">DvMF_2023 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=883 DESVM])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vya FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vya OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vya RCSB], [http://www.ebi.ac.uk/pdbsum/3vya PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vya FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vya OCA], [http://pdbe.org/3vya PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3vya RCSB], [http://www.ebi.ac.uk/pdbsum/3vya PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3vya ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/FMNB_DESVM FMNB_DESVM]] Functions as a redox protein with a potential of -325 mV.
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Desulfovibrio vulgaris str. 'miyazaki f'~~]]	+	[[Category: Desvm]]
	[[Category: Kitamura, M]]		[[Category: Kitamura, M]]
	[[Category: Nakanishi, T]]		[[Category: Nakanishi, T]]
	[[Category: Takagi, R]]		[[Category: Takagi, R]]
	[[Category: Electron transport]]		[[Category: Electron transport]]

OCA at 14:38, 5 January 2015

OCA — Mon, 05 Jan 2015 14:38:29 GMT

←Older revision		Revision as of 14:38, 5 January 2015
Line 1:		Line 1:
-	~~{{STRUCTURE_3vya\| PDB=3vya \| SCENE= }}~~	+	==W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)==
-	===W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)===	+	<StructureSection load='3vya' size='340' side='right' caption='[[3vya]], [[Resolution\|resolution]] 2.40Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[3vya]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._'miyazaki_f' Desulfovibrio vulgaris str. 'miyazaki f']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VYA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VYA FirstGlance]. <br>
-	[[3vya]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._'miyazaki_f' Desulfovibrio vulgaris str. 'miyazaki f']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VYA OCA].	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1flm\|1flm]], [[3vy2\|3vy2]], [[3vy5\|3vy5]], [[2e83\|2e83]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">DvMF_2023 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=883 Desulfovibrio vulgaris str. 'Miyazaki F'])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vya FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vya OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vya RCSB], [http://www.ebi.ac.uk/pdbsum/3vya PDBsum]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
	[[Category: Desulfovibrio vulgaris str. 'miyazaki f']]		[[Category: Desulfovibrio vulgaris str. 'miyazaki f']]
-	[[Category: Kitamura, M.]]	+	[[Category: Kitamura, M]]
-	[[Category: Nakanishi, T.]]	+	[[Category: Nakanishi, T]]
-	[[Category: Takagi, R.]]	+	[[Category: Takagi, R]]
	[[Category: Electron transport]]		[[Category: Electron transport]]

OCA at 08:14, 29 September 2013

OCA — Sun, 29 Sep 2013 08:14:48 GMT

←Older revision		Revision as of 08:14, 29 September 2013
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{STRUCTURE_3vya\| PDB=3vya \| SCENE= }}
		+	===W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)===

-	~~The entry~~ 3vya is ~~ON HOLD until Paper Publication~~	+	==About this Structure==
-		+	[[3vya]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._'miyazaki_f' Desulfovibrio vulgaris str. 'miyazaki f']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VYA OCA].
-	~~Authors~~: ~~Takagi~~, R., Nakanishi, T., ~~Kitamura, M~~.	+	[[Category: Desulfovibrio vulgaris str. 'miyazaki f']]
-		+	[[Category: Kitamura, M.]]
-	~~Description~~: ~~W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)~~	+	[[Category: Nakanishi, T.]]
		+	[[Category: Takagi, R.]]
		+	[[Category: Electron transport]]

OCA at 06:41, 10 October 2012

OCA — Wed, 10 Oct 2012 06:41:03 GMT

←Older revision		Revision as of 06:41, 10 October 2012
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3vya is ON HOLD	+	The entry 3vya is ON HOLD until Paper Publication

	Authors: Takagi, R., Nakanishi, T., Kitamura, M.		Authors: Takagi, R., Nakanishi, T., Kitamura, M.

	Description: W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)		Description: W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)

OCA: Protected "3vya" [edit=sysop:move=sysop]

OCA — Wed, 03 Oct 2012 05:33:21 GMT

Protected "3vya" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:33, 3 October 2012

OCA: New page: '''Unreleased structure''' The entry 3vya is ON HOLD Authors: Takagi, R., Nakanishi, T., Kitamura, M. Description: W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyaz...

OCA — Wed, 03 Oct 2012 05:33:20 GMT

New page: '''Unreleased structure''' The entry 3vya is ON HOLD Authors: Takagi, R., Nakanishi, T., Kitamura, M. Description: W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyaz...

New page

'''Unreleased structure'''

The entry 3vya is ON HOLD

Authors: Takagi, R., Nakanishi, T., Kitamura, M.

Description: W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)