3w5g - Revision history

OCA at 12:50, 8 November 2023

OCA — Wed, 08 Nov 2023 12:50:44 GMT

←Older revision		Revision as of 12:50, 8 November 2023
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	<StructureSection load='3w5g' size='340' side='right'caption='[[3w5g]], [[Resolution\|resolution]] 3.00Å' scene=''>		<StructureSection load='3w5g' size='340' side='right'caption='[[3w5g]], [[Resolution\|resolution]] 3.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3w5g]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Lycopersicon_esculentum Lycopersicon esculentum~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W5G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3W5G FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3w5g]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Solanum_lycopersicum Solanum lycopersicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W5G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3W5G FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=GAL:BETA~~-~~D-GALACTOSE'>GAL</scene>~~, ~~<scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3Å</td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>~~[[~~Related_structure~~\|~~Related:~~]]~~</b></td><td class="sblockDat"><div style='overflow: auto~~; ~~max-height: 3em;'>[[3w5f\|3w5f]]</div>~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>TBG4 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~4081 Lycopersicon esculentum])</td~~><~~/tr>~~	+
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks'>[https~~:~~//en.wikipedia.org/wiki/Beta~~-~~galactosidase Beta~~-~~galactosidase], with EC number [https://www.brenda~~-~~enzymes.info/php/result_flat.php4?ecno=3.2.1.23 3.2.1.23]~~ </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3w5g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w5g OCA], [https://pdbe.org/3w5g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3w5g RCSB], [https://www.ebi.ac.uk/pdbsum/3w5g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3w5g ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3w5g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w5g OCA], [https://pdbe.org/3w5g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3w5g RCSB], [https://www.ebi.ac.uk/pdbsum/3w5g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3w5g ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/O81100_SOLLC O81100_SOLLC]

	==See Also==		==See Also==
Line 16:		Line 16:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Beta-galactosidase]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Lycopersicon esculentum~~]]	+	[[Category: Solanum lycopersicum]]
-	[[Category: Eda, M]]	+	[[Category: Eda M]]
-	[[Category: Tada, T]]	+	[[Category: Tada T]]
-	~~[[Category: Beta-sandwich]]~~	+
-	~~[[Category: Glycosylation]]~~	+
-	~~[[Category: Hydrolase]]~~	+
-	~~[[Category: Tim barrel~~]]	+

OCA at 05:23, 3 August 2022

OCA — Wed, 03 Aug 2022 05:23:04 GMT

←Older revision		Revision as of 05:23, 3 August 2022
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	==Crystal structure of tomato beta-galactosidase 4 in complex with galactose==		==Crystal structure of tomato beta-galactosidase 4 in complex with galactose==
-	<StructureSection load='3w5g' size='340' side='right' caption='[[3w5g]], [[Resolution\|resolution]] 3.00Å' scene=''>	+	<StructureSection load='3w5g' size='340' side='right'caption='[[3w5g]], [[Resolution\|resolution]] 3.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3w5g]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Lycopersicon_esculentum Lycopersicon esculentum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W5G OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3W5G FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3w5g]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lycopersicon_esculentum Lycopersicon esculentum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W5G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3W5G FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3w5f\|3w5f]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3w5f\|3w5f]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TBG4 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4081 Lycopersicon esculentum])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TBG4 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4081 Lycopersicon esculentum])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Beta-galactosidase Beta-galactosidase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.23 3.2.1.23] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Beta-galactosidase Beta-galactosidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.23 3.2.1.23] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3w5g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w5g OCA], [~~http~~://pdbe.org/3w5g PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3w5g RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3w5g PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3w5g ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3w5g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w5g OCA], [https://pdbe.org/3w5g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3w5g RCSB], [https://www.ebi.ac.uk/pdbsum/3w5g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3w5g ProSAT]</span></td></tr>
	</table>		</table>

	==See Also==		==See Also==
	*[[Galactosidase\|Galactosidase]]		*[[Galactosidase\|Galactosidase]]
		+	*[[Galactosidase 3D structures\|Galactosidase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Beta-galactosidase]]		[[Category: Beta-galactosidase]]
		+	[[Category: Large Structures]]
	[[Category: Lycopersicon esculentum]]		[[Category: Lycopersicon esculentum]]
	[[Category: Eda, M]]		[[Category: Eda, M]]

OCA at 17:30, 4 August 2016

OCA — Thu, 04 Aug 2016 17:30:28 GMT

←Older revision		Revision as of 17:30, 4 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of tomato beta-galactosidase 4 in complex with galactose==		==Crystal structure of tomato beta-galactosidase 4 in complex with galactose==
	<StructureSection load='3w5g' size='340' side='right' caption='[[3w5g]], [[Resolution\|resolution]] 3.00Å' scene=''>		<StructureSection load='3w5g' size='340' side='right' caption='[[3w5g]], [[Resolution\|resolution]] 3.00Å' scene=''>
Line 7:		Line 8:
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TBG4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4081 Lycopersicon esculentum])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TBG4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4081 Lycopersicon esculentum])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-galactosidase Beta-galactosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.23 3.2.1.23] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-galactosidase Beta-galactosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.23 3.2.1.23] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3w5g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w5g OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3w5g RCSB], [http://www.ebi.ac.uk/pdbsum/3w5g PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3w5g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w5g OCA], [http://pdbe.org/3w5g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3w5g RCSB], [http://www.ebi.ac.uk/pdbsum/3w5g PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3w5g ProSAT]</span></td></tr>
	</table>		</table>

OCA at 17:07, 21 December 2014

OCA — Sun, 21 Dec 2014 17:07:24 GMT

←Older revision		Revision as of 17:07, 21 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3w5g\| PDB=3w5g \| SCENE= }}~~	+	==Crystal structure of tomato beta-galactosidase 4 in complex with galactose==
-	===Crystal structure of tomato beta-galactosidase 4 in complex with galactose===	+	<StructureSection load='3w5g' size='340' side='right' caption='[[3w5g]], [[Resolution\|resolution]] 3.00Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3w5g]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lycopersicon_esculentum Lycopersicon esculentum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W5G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3W5G FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3w5f\|3w5f]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TBG4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4081 Lycopersicon esculentum])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-galactosidase Beta-galactosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.23 3.2.1.23] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3w5g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w5g OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3w5g RCSB], [http://www.ebi.ac.uk/pdbsum/3w5g PDBsum]</span></td></tr>
		+	</table>

-	==~~About this Structure~~==	+	==See Also==
-	[[~~3w5g~~]] ~~is a 2 chain structure. Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3W5G OCA].~~	+	*[[Galactosidase\|Galactosidase]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Beta-galactosidase]]		[[Category: Beta-galactosidase]]
-	[[Category: Eda, M.]]	+	[[Category: Lycopersicon esculentum]]
-	[[Category: Tada, T.]]	+	[[Category: Eda, M]]
		+	[[Category: Tada, T]]
	[[Category: Beta-sandwich]]		[[Category: Beta-sandwich]]
	[[Category: Glycosylation]]		[[Category: Glycosylation]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Tim barrel]]		[[Category: Tim barrel]]

OCA at 07:42, 29 January 2014

OCA — Wed, 29 Jan 2014 07:42:38 GMT

←Older revision		Revision as of 07:42, 29 January 2014
Line 1:		Line 1:
-	~~'''Unreleased~~ structure~~'''~~	+	{{STRUCTURE_3w5g\| PDB=3w5g \| SCENE= }}
		+	===Crystal structure of tomato beta-galactosidase 4 in complex with galactose===

-	~~The entry~~ 3w5g is ~~ON HOLD until Paper Publication~~	+	==About this Structure==
-		+	[[3w5g]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W5G OCA].
-	~~Authors~~: Eda, M., Tada, T.	+	[[Category: Beta-galactosidase]]
-		+	[[Category: Eda, M.]]
-	~~Description~~: ~~Crystal structure of tomato beta~~-~~galactosidase 4 in complex with galactose~~	+	[[Category: Tada, T.]]
		+	[[Category: Beta-sandwich]]
		+	[[Category: Glycosylation]]
		+	[[Category: Hydrolase]]
		+	[[Category: Tim barrel]]

OCA at 09:22, 4 September 2013

OCA — Wed, 04 Sep 2013 09:22:25 GMT

←Older revision		Revision as of 09:22, 4 September 2013
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3w5g is ON HOLD	+	The entry 3w5g is ON HOLD until Paper Publication

	Authors: Eda, M., Tada, T.		Authors: Eda, M., Tada, T.

	Description: Crystal structure of tomato beta-galactosidase 4 in complex with galactose		Description: Crystal structure of tomato beta-galactosidase 4 in complex with galactose

OCA at 09:51, 13 February 2013

OCA — Wed, 13 Feb 2013 09:51:21 GMT

←Older revision		Revision as of 09:51, 13 February 2013
Line 3:		Line 3:
	The entry 3w5g is ON HOLD		The entry 3w5g is ON HOLD

-	Authors: Eda, M, Tada, T	+	Authors: Eda, M., Tada, T.

	Description: Crystal structure of tomato beta-galactosidase 4 in complex with galactose		Description: Crystal structure of tomato beta-galactosidase 4 in complex with galactose

OCA: Protected "3w5g" [edit=sysop:move=sysop]

OCA — Wed, 06 Feb 2013 12:14:05 GMT

Protected "3w5g" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:14, 6 February 2013

OCA: New page: '''Unreleased structure''' The entry 3w5g is ON HOLD Authors: Eda, M, Tada, T Description: Crystal structure of tomato beta-galactosidase 4 in complex with galactose

OCA — Wed, 06 Feb 2013 12:14:04 GMT

New page: '''Unreleased structure''' The entry 3w5g is ON HOLD Authors: Eda, M, Tada, T Description: Crystal structure of tomato beta-galactosidase 4 in complex with galactose

New page

'''Unreleased structure'''

The entry 3w5g is ON HOLD

Authors: Eda, M, Tada, T

Description: Crystal structure of tomato beta-galactosidase 4 in complex with galactose