3wa1 - Revision history

OCA at 05:28, 3 August 2022

OCA — Wed, 03 Aug 2022 05:28:39 GMT

←Older revision		Revision as of 05:28, 3 August 2022
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	==Crystal structure of BinB: A receptor binding component of the binary toxin from Lysinibacillus sphaericus==		==Crystal structure of BinB: A receptor binding component of the binary toxin from Lysinibacillus sphaericus==
-	<StructureSection load='3wa1' size='340' side='right' caption='[[3wa1]], [[Resolution\|resolution]] 1.75Å' scene=''>	+	<StructureSection load='3wa1' size='340' side='right'caption='[[3wa1]], [[Resolution\|resolution]] 1.75Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3wa1]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Atcc_14577 Atcc 14577]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WA1 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3WA1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3wa1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_14577 Atcc 14577]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WA1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WA1 FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">binB ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1421 ATCC 14577])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">binB ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1421 ATCC 14577])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3wa1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wa1 OCA], [~~http~~://pdbe.org/3wa1 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3wa1 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3wa1 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3wa1 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wa1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wa1 OCA], [https://pdbe.org/3wa1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wa1 RCSB], [https://www.ebi.ac.uk/pdbsum/3wa1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wa1 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	</StructureSection>		</StructureSection>
	[[Category: Atcc 14577]]		[[Category: Atcc 14577]]
		+	[[Category: Large Structures]]
	[[Category: Boonserm, P]]		[[Category: Boonserm, P]]
	[[Category: Chimnaronk, S]]		[[Category: Chimnaronk, S]]

OCA at 09:45, 21 February 2019

OCA — Thu, 21 Feb 2019 09:45:41 GMT

←Older revision		Revision as of 09:45, 21 February 2019
Line 3:		Line 3:
	<StructureSection load='3wa1' size='340' side='right' caption='[[3wa1]], [[Resolution\|resolution]] 1.75Å' scene=''>		<StructureSection load='3wa1' size='340' side='right' caption='[[3wa1]], [[Resolution\|resolution]] 1.75Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3wa1]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WA1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WA1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3wa1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_14577 Atcc 14577]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WA1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WA1 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wa1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wa1 OCA], [http://pdbe.org/3wa1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3wa1 RCSB], [http://www.ebi.ac.uk/pdbsum/3wa1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3wa1 ProSAT]</span></td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">binB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1421 ATCC 14577])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wa1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wa1 OCA], [http://pdbe.org/3wa1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3wa1 RCSB], [http://www.ebi.ac.uk/pdbsum/3wa1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3wa1 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Atcc 14577]]
	[[Category: Boonserm, P]]		[[Category: Boonserm, P]]
	[[Category: Chimnaronk, S]]		[[Category: Chimnaronk, S]]

OCA at 10:37, 11 August 2016

OCA — Thu, 11 Aug 2016 10:37:52 GMT

←Older revision		Revision as of 10:37, 11 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of BinB: A receptor binding component of the binary toxin from Lysinibacillus sphaericus==		==Crystal structure of BinB: A receptor binding component of the binary toxin from Lysinibacillus sphaericus==
	<StructureSection load='3wa1' size='340' side='right' caption='[[3wa1]], [[Resolution\|resolution]] 1.75Å' scene=''>		<StructureSection load='3wa1' size='340' side='right' caption='[[3wa1]], [[Resolution\|resolution]] 1.75Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3wa1]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WA1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WA1 FirstGlance]. <br>		<table><tr><td colspan='2'>[[3wa1]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WA1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WA1 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wa1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wa1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3wa1 RCSB], [http://www.ebi.ac.uk/pdbsum/3wa1 PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wa1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wa1 OCA], [http://pdbe.org/3wa1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3wa1 RCSB], [http://www.ebi.ac.uk/pdbsum/3wa1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3wa1 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 13:		Line 14:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3wa1" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 11:52, 20 January 2015

OCA — Tue, 20 Jan 2015 11:52:27 GMT

←Older revision		Revision as of 11:52, 20 January 2015
Line 17:		Line 17:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Boonserm, P.]]	+	[[Category: Boonserm, P]]
-	[[Category: Chimnaronk, S.]]	+	[[Category: Chimnaronk, S]]
-	[[Category: Promdonkoy, B.]]	+	[[Category: Promdonkoy, B]]
-	[[Category: Srisucharitpanit, K.]]	+	[[Category: Srisucharitpanit, K]]
-	[[Category: Tanaka, I.]]	+	[[Category: Tanaka, I]]
-	[[Category: Yao, M.]]	+	[[Category: Yao, M]]
	[[Category: A-b toxin]]		[[Category: A-b toxin]]
	[[Category: Binary toxin]]		[[Category: Binary toxin]]
	[[Category: Toxin]]		[[Category: Toxin]]

OCA at 05:52, 8 October 2014

OCA — Wed, 08 Oct 2014 05:52:42 GMT

←Older revision		Revision as of 05:52, 8 October 2014
Line 1:		Line 1:
-	==Crystal structure of ~~protein~~==	+	==Crystal structure of BinB: A receptor binding component of the binary toxin from Lysinibacillus sphaericus==
	<StructureSection load='3wa1' size='340' side='right' caption='[[3wa1]], [[Resolution\|resolution]] 1.75Å' scene=''>		<StructureSection load='3wa1' size='340' side='right' caption='[[3wa1]], [[Resolution\|resolution]] 1.75Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3wa1]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WA1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WA1 FirstGlance]. <br>		<table><tr><td colspan='2'>[[3wa1]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WA1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WA1 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wa1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wa1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3wa1 RCSB], [http://www.ebi.ac.uk/pdbsum/3wa1 PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wa1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wa1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3wa1 RCSB], [http://www.ebi.ac.uk/pdbsum/3wa1 PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The binary toxin (Bin), produced by Lysinibacillus sphaericus, is composed of BinA (42 kDa) and BinB (51 kDa) proteins, which are both required for full toxicity against Culex and Anopheles mosquito larvae. Specificity of Bin toxin is determined by the binding of BinB component to a receptor present on the midgut epithelial membranes, while BinA is proposed to be a toxic component. Here, we determined the first crystal structure of the active form of BinB at a resolution of 1.75 A. BinB possesses two distinct structural domains in its N- and C-termini. The globular N-terminal domain has a beta-trefoil scaffold which is a highly conserved architecture of some sugar binding proteins or lectins, suggesting a role of this domain in receptor-binding. The BinB beta-rich C-terminal domain shares similar three-dimensional folding with aerolysin type beta-pore forming toxins, despite a low sequence identity. The BinB structure, therefore, is a new member of the aerolysin-like toxin family, with probably similarities in the cytolytic mechanism that takes place via pore formation. Proteins 2014; 82:2703-2712. (c) 2014 Wiley Periodicals, Inc.
		+
		+	Crystal structure of BinB: A receptor binding component of the binary toxin from Lysinibacillus sphaericus.,Srisucharitpanit K, Yao M, Promdonkoy B, Chimnaronk S, Tanaka I, Boonserm P Proteins. 2014 Oct;82(10):2703-12. doi: 10.1002/prot.24636. Epub 2014 Jul 5. PMID:24975613<ref>PMID:24975613</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 08:39, 2 July 2014

OCA — Wed, 02 Jul 2014 08:39:15 GMT

←Older revision		Revision as of 08:39, 2 July 2014
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==Crystal structure of protein==
-		+	<StructureSection load='3wa1' size='340' side='right' caption='[[3wa1]], [[Resolution\|resolution]] 1.75Å' scene=''>
-	~~The entry~~ 3wa1 is ~~ON HOLD until Paper Publication~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[3wa1]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WA1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WA1 FirstGlance]. <br>
-	~~Authors~~: ~~Srisucharitpanit~~, K., ~~Yao~~, M., Chimnaronk, S., Promdonkoy, B., ~~Boonserm, P~~., Tanaka, I.	+	</td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wa1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wa1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3wa1 RCSB], [http://www.ebi.ac.uk/pdbsum/3wa1 PDBsum]</span></td></tr>
-		+	<table>
-	~~Description~~: ~~Crystal structure of protein~~	+	__TOC__
		+	</StructureSection>
		+	[[Category: Boonserm, P.]]
		+	[[Category: Chimnaronk, S.]]
		+	[[Category: Promdonkoy, B.]]
		+	[[Category: Srisucharitpanit, K.]]
		+	[[Category: Tanaka, I.]]
		+	[[Category: Yao, M.]]
		+	[[Category: A-b toxin]]
		+	[[Category: Binary toxin]]
		+	[[Category: Toxin]]

OCA at 04:42, 13 February 2014

OCA — Thu, 13 Feb 2014 04:42:20 GMT

←Older revision		Revision as of 04:42, 13 February 2014
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3wa1 is ON HOLD	+	The entry 3wa1 is ON HOLD until Paper Publication

	Authors: Srisucharitpanit, K., Yao, M., Chimnaronk, S., Promdonkoy, B., Boonserm, P., Tanaka, I.		Authors: Srisucharitpanit, K., Yao, M., Chimnaronk, S., Promdonkoy, B., Boonserm, P., Tanaka, I.

	Description: Crystal structure of protein		Description: Crystal structure of protein

OCA at 10:36, 19 June 2013

OCA — Wed, 19 Jun 2013 10:36:31 GMT

←Older revision		Revision as of 10:36, 19 June 2013
Line 5:		Line 5:
	Authors: Srisucharitpanit, K., Yao, M., Chimnaronk, S., Promdonkoy, B., Boonserm, P., Tanaka, I.		Authors: Srisucharitpanit, K., Yao, M., Chimnaronk, S., Promdonkoy, B., Boonserm, P., Tanaka, I.

-	Description: ~~CRYSTAL STRUCTURE OF PROTEIN~~	+	Description: Crystal structure of protein

OCA: Protected "3wa1" [edit=sysop:move=sysop]

OCA — Thu, 02 May 2013 06:54:19 GMT

Protected "3wa1" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:54, 2 May 2013

OCA: New page: '''Unreleased structure''' The entry 3wa1 is ON HOLD Authors: Srisucharitpanit, K., Yao, M., Chimnaronk, S., Promdonkoy, B., Boonserm, P., Tanaka, I. Description: CRYSTAL STRUCTURE OF ...

OCA — Thu, 02 May 2013 06:54:17 GMT

New page: '''Unreleased structure''' The entry 3wa1 is ON HOLD Authors: Srisucharitpanit, K., Yao, M., Chimnaronk, S., Promdonkoy, B., Boonserm, P., Tanaka, I. Description: CRYSTAL STRUCTURE OF ...

New page

'''Unreleased structure'''

The entry 3wa1 is ON HOLD

Authors: Srisucharitpanit, K., Yao, M., Chimnaronk, S., Promdonkoy, B., Boonserm, P., Tanaka, I.

Description: CRYSTAL STRUCTURE OF PROTEIN