3wfq - Revision history

OCA at 13:08, 8 November 2023

OCA — Wed, 08 Nov 2023 13:08:33 GMT

←Older revision		Revision as of 13:08, 8 November 2023
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	<StructureSection load='3wfq' size='340' side='right'caption='[[3wfq]], [[Resolution\|resolution]] 3.62Å' scene=''>		<StructureSection load='3wfq' size='340' side='right'caption='[[3wfq]], [[Resolution\|resolution]] 3.62Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3wfq]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WFQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WFQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3wfq]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5], [https://en.wikipedia.org/wiki/Thermotoga_maritima_MSB8 Thermotoga maritima MSB8] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WFQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WFQ FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"~~><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3.619Å</td></tr>
-	~~<tr~~ id~~='related'><td class~~="~~sblockLbl~~">~~<b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max~~-~~height: 3em;'>[[3wfo\|3wfo]]~~, [[~~3wfp~~\|~~3wfp~~]]~~, [[3wfr\|3wfr]], [[3wfs\|3wfs]]</div></td></tr>~~	+
-	~~<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en~~.~~wikipedia.org/wiki/CCA_tRNA_nucleotidyltransferase CCA tRNA nucleotidyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.72 2.7.7.72] </span>~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wfq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wfq OCA], [https://pdbe.org/3wfq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wfq RCSB], [https://www.ebi.ac.uk/pdbsum/3wfq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wfq ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wfq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wfq OCA], [https://pdbe.org/3wfq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wfq RCSB], [https://www.ebi.ac.uk/pdbsum/3wfq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wfq ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/CATNT_AQUAE CATNT_AQUAE] tRNA nucleotidyltransferase involved in the synthesis of the tRNA CCA terminus. Adds the two cytidine residues to tRNA.<ref>PMID:11701927</ref> <ref>PMID:24389024</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 20:		Line 20:

	==See Also==		==See Also==
-	*[[Poly(A) ~~Polymerase~~\|Poly(A) ~~Polymerase~~]]	+	*[[Poly(A) polymerase 3D structures\|Poly(A) polymerase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~CCA tRNA nucleotidyltransferase~~]]	+	[[Category: Aquifex aeolicus VF5]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Takeshita, D~~]]	+	[[Category: Synthetic construct]]
-	[[Category: ~~Tomita, K~~]]	+	[[Category: Thermotoga maritima MSB8]]
-	[[Category: ~~Yamashita, S~~]]	+	[[Category: Takeshita D]]
-	[[Category: ~~Terminal nucleotide transferase~~]]	+	[[Category: Tomita K]]
-	[[Category: ~~Transferase-rna complex~~]]	+	[[Category: Yamashita S]]

OCA at 05:34, 3 August 2022

OCA — Wed, 03 Aug 2022 05:34:56 GMT

←Older revision		Revision as of 05:34, 3 August 2022
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	<StructureSection load='3wfq' size='340' side='right'caption='[[3wfq]], [[Resolution\|resolution]] 3.62Å' scene=''>		<StructureSection load='3wfq' size='340' side='right'caption='[[3wfq]], [[Resolution\|resolution]] 3.62Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3wfq]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WFQ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3WFQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3wfq]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WFQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WFQ FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3wfo\|3wfo]], [[3wfp\|3wfp]], [[3wfr\|3wfr]], [[3wfs\|3wfs]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3wfo\|3wfo]], [[3wfp\|3wfp]], [[3wfr\|3wfr]], [[3wfs\|3wfs]]</div></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/CCA_tRNA_nucleotidyltransferase CCA tRNA nucleotidyltransferase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.72 2.7.7.72] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/CCA_tRNA_nucleotidyltransferase CCA tRNA nucleotidyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.72 2.7.7.72] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3wfq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wfq OCA], [~~http~~://pdbe.org/3wfq PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3wfq RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3wfq PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3wfq ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wfq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wfq OCA], [https://pdbe.org/3wfq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wfq RCSB], [https://www.ebi.ac.uk/pdbsum/3wfq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wfq ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 06:52, 7 August 2019

OCA — Wed, 07 Aug 2019 06:52:56 GMT

←Older revision		Revision as of 06:52, 7 August 2019
Line 1:		Line 1:

	==tRNA processing enzyme complex 1==		==tRNA processing enzyme complex 1==
-	<StructureSection load='3wfq' size='340' side='right' caption='[[3wfq]], [[Resolution\|resolution]] 3.62Å' scene=''>	+	<StructureSection load='3wfq' size='340' side='right'caption='[[3wfq]], [[Resolution\|resolution]] 3.62Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3wfq]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WFQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WFQ FirstGlance]. <br>		<table><tr><td colspan='2'>[[3wfq]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WFQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WFQ FirstGlance]. <br>
Line 18:		Line 18:
	</div>		</div>
	<div class="pdbe-citations 3wfq" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 3wfq" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Poly(A) Polymerase\|Poly(A) Polymerase]]
	== References ==		== References ==
	<references/>		<references/>
Line 23:		Line 26:
	</StructureSection>		</StructureSection>
	[[Category: CCA tRNA nucleotidyltransferase]]		[[Category: CCA tRNA nucleotidyltransferase]]
		+	[[Category: Large Structures]]
	[[Category: Takeshita, D]]		[[Category: Takeshita, D]]
	[[Category: Tomita, K]]		[[Category: Tomita, K]]

OCA at 12:20, 6 November 2017

OCA — Mon, 06 Nov 2017 12:20:34 GMT

←Older revision		Revision as of 12:20, 6 November 2017
Line 18:		Line 18:
	</div>		</div>
	<div class="pdbe-citations 3wfq" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 3wfq" style="background-color:#fffaf0;"></div>
-
-	==See Also==
-	*[[Poly(A) Polymerase\|Poly(A) Polymerase]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 10:45, 3 August 2017

OCA — Thu, 03 Aug 2017 10:45:54 GMT

←Older revision		Revision as of 10:45, 3 August 2017
Line 3:		Line 3:
	<StructureSection load='3wfq' size='340' side='right' caption='[[3wfq]], [[Resolution\|resolution]] 3.62Å' scene=''>		<StructureSection load='3wfq' size='340' side='right' caption='[[3wfq]], [[Resolution\|resolution]] 3.62Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3wfq]] is a 8 chain structure ~~with sequence from [http://en.wikipedia.org/wiki/Aquae Aquae]~~. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WFQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WFQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3wfq]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WFQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WFQ FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3wfo\|3wfo]], [[3wfp\|3wfp]], [[3wfr\|3wfr]], [[3wfs\|3wfs]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3wfo\|3wfo]], [[3wfp\|3wfp]], [[3wfr\|3wfr]], [[3wfs\|3wfs]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pcnB2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/CCA_tRNA_nucleotidyltransferase CCA tRNA nucleotidyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.72 2.7.7.72] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/CCA_tRNA_nucleotidyltransferase CCA tRNA nucleotidyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.72 2.7.7.72] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wfq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wfq OCA], [http://pdbe.org/3wfq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3wfq RCSB], [http://www.ebi.ac.uk/pdbsum/3wfq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3wfq ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wfq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wfq OCA], [http://pdbe.org/3wfq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3wfq RCSB], [http://www.ebi.ac.uk/pdbsum/3wfq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3wfq ProSAT]</span></td></tr>
Line 26:		Line 25:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Aquae]]
	[[Category: CCA tRNA nucleotidyltransferase]]		[[Category: CCA tRNA nucleotidyltransferase]]
	[[Category: Takeshita, D]]		[[Category: Takeshita, D]]

OCA at 17:06, 11 August 2016

OCA — Thu, 11 Aug 2016 17:06:03 GMT

←Older revision		Revision as of 17:06, 11 August 2016
Line 1:		Line 1:
		+
	==tRNA processing enzyme complex 1==		==tRNA processing enzyme complex 1==
	<StructureSection load='3wfq' size='340' side='right' caption='[[3wfq]], [[Resolution\|resolution]] 3.62Å' scene=''>		<StructureSection load='3wfq' size='340' side='right' caption='[[3wfq]], [[Resolution\|resolution]] 3.62Å' scene=''>
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	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pcnB2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pcnB2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/CCA_tRNA_nucleotidyltransferase CCA tRNA nucleotidyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.72 2.7.7.72] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/CCA_tRNA_nucleotidyltransferase CCA tRNA nucleotidyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.72 2.7.7.72] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wfq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wfq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3wfq RCSB], [http://www.ebi.ac.uk/pdbsum/3wfq PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wfq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wfq OCA], [http://pdbe.org/3wfq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3wfq RCSB], [http://www.ebi.ac.uk/pdbsum/3wfq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3wfq ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3wfq" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Poly(A) Polymerase\|Poly(A) Polymerase]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 14:31, 5 January 2015

OCA — Mon, 05 Jan 2015 14:31:46 GMT

←Older revision		Revision as of 14:31, 5 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3wfq]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquae Aquae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WFQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WFQ FirstGlance]. <br>		<table><tr><td colspan='2'>[[3wfq]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquae Aquae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WFQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WFQ FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3wfo\|3wfo]], [[3wfp\|3wfp]], [[3wfr\|3wfr]], [[3wfs\|3wfs]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3wfo\|3wfo]], [[3wfp\|3wfp]], [[3wfr\|3wfr]], [[3wfs\|3wfs]]</td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pcnB2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pcnB2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/CCA_tRNA_nucleotidyltransferase CCA tRNA nucleotidyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.72 2.7.7.72] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/CCA_tRNA_nucleotidyltransferase CCA tRNA nucleotidyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.72 2.7.7.72] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wfq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wfq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3wfq RCSB], [http://www.ebi.ac.uk/pdbsum/3wfq PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wfq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wfq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3wfq RCSB], [http://www.ebi.ac.uk/pdbsum/3wfq PDBsum]</span></td></tr>
-	<table>	+	</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 23:		Line 23:
	[[Category: Aquae]]		[[Category: Aquae]]
	[[Category: CCA tRNA nucleotidyltransferase]]		[[Category: CCA tRNA nucleotidyltransferase]]
-	[[Category: Takeshita, D.]]	+	[[Category: Takeshita, D]]
-	[[Category: Tomita, K.]]	+	[[Category: Tomita, K]]
-	[[Category: Yamashita, S.]]	+	[[Category: Yamashita, S]]
	[[Category: Terminal nucleotide transferase]]		[[Category: Terminal nucleotide transferase]]
	[[Category: Transferase-rna complex]]		[[Category: Transferase-rna complex]]

OCA at 06:34, 13 August 2014

OCA — Wed, 13 Aug 2014 06:34:16 GMT

←Older revision		Revision as of 06:34, 13 August 2014
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-	~~{{STRUCTURE_3wfq~~\| ~~PDB~~=3wfq \| ~~SCENE~~= }}	+	==tRNA processing enzyme complex 1==
-	===tRNA ~~processing enzyme complex 1~~===	+	<StructureSection load='3wfq' size='340' side='right' caption='[[3wfq]], [[Resolution\|resolution]] 3.62Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3wfq]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquae Aquae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WFQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WFQ FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3wfo\|3wfo]], [[3wfp\|3wfp]], [[3wfr\|3wfr]], [[3wfs\|3wfs]]</td></tr>
		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pcnB2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr>
		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/CCA_tRNA_nucleotidyltransferase CCA tRNA nucleotidyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.72 2.7.7.72] </span></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wfq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wfq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3wfq RCSB], [http://www.ebi.ac.uk/pdbsum/3wfq PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The 3'-terminal CCA (CCA-3' at positions 74-76) of tRNA is synthesized by CCA-adding enzyme using CTP and ATP as substrates, without a nucleic acid template. In Aquifex aeolicus, CC-adding and A-adding enzymes collaboratively synthesize the CCA-3'. The mechanism of CCA-3' synthesis by these two enzymes remained obscure. We now present crystal structures representing CC addition onto tRNA by A. aeolicus CC-adding enzyme. After C(7)(4) addition in an enclosed active pocket and pyrophosphate release, the tRNA translocates and rotates relative to the enzyme, and C(7)(5) addition occurs in the same active pocket as C(7)(4) addition. At both the C(7)(4)-adding and C(7)(5)-adding stages, CTP is selected by Watson-Crick-like hydrogen bonds between the cytosine of CTP and conserved Asp and Arg residues in the pocket. After C(7)(4)C(7)(5) addition and pyrophosphate release, the tRNA translocates further and drops off the enzyme, and the CC-adding enzyme terminates RNA polymerization.

-	~~==About this~~ Structure==	+	Translocation and rotation of tRNA during template-independent RNA polymerization by tRNA nucleotidyltransferase.,Yamashita S, Takeshita D, Tomita K Structure. 2014 Feb 4;22(2):315-25. doi: 10.1016/j.str.2013.12.002. Epub 2014 Jan, 2. PMID:24389024<ref>PMID:24389024</ref>
-	~~[[3wfq]] is a 8 chain structure~~. ~~Full crystallographic information is available from [http~~:/~~/oca~~.~~weizmann~~.ac.il/~~oca-bin~~/~~ocashort?id~~=~~3WFQ OCA~~].	+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Aquae]]
	[[Category: CCA tRNA nucleotidyltransferase]]		[[Category: CCA tRNA nucleotidyltransferase]]
	[[Category: Takeshita, D.]]		[[Category: Takeshita, D.]]

OCA at 12:11, 1 January 2014

OCA — Wed, 01 Jan 2014 12:11:43 GMT

←Older revision		Revision as of 12:11, 1 January 2014
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-	~~'''Unreleased structure'''~~	+	{{STRUCTURE_3wfq\| PDB=3wfq \| SCENE= }}
		+	===tRNA processing enzyme complex 1===

-	~~The entry~~ 3wfq is ~~ON HOLD until Paper Publication~~	+	==About this Structure==
-		+	[[3wfq]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WFQ OCA].
-	~~Authors~~: ~~Yamashita, S.,~~ Takeshita, D., Tomita, K.	+	[[Category: CCA tRNA nucleotidyltransferase]]
-		+	[[Category: Takeshita, D.]]
-	~~Description~~: ~~tRNA processing enzyme~~ complex 1	+	[[Category: Tomita, K.]]
		+	[[Category: Yamashita, S.]]
		+	[[Category: Terminal nucleotide transferase]]
		+	[[Category: Transferase-rna complex]]

OCA at 05:32, 23 October 2013

OCA — Wed, 23 Oct 2013 05:32:56 GMT

←Older revision		Revision as of 05:32, 23 October 2013
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3wfq is ON HOLD	+	The entry 3wfq is ON HOLD until Paper Publication

	Authors: Yamashita, S., Takeshita, D., Tomita, K.		Authors: Yamashita, S., Takeshita, D., Tomita, K.

	Description: tRNA processing enzyme complex 1		Description: tRNA processing enzyme complex 1