3x3z - Revision history

OCA at 13:40, 8 November 2023

OCA — Wed, 08 Nov 2023 13:40:57 GMT

←Older revision		Revision as of 13:40, 8 November 2023
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	<StructureSection load='3x3z' size='340' side='right'caption='[[3x3z]], [[Resolution\|resolution]] 1.51Å' scene=''>		<StructureSection load='3x3z' size='340' side='right'caption='[[3x3z]], [[Resolution\|resolution]] 1.51Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3x3z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"achromobacter_globiformis"_(conn_1928)_bergey_et_al._1930 "achromobacter~~ globiformis~~" (conn 1928) bergey et al. 1930~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3X3Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3X3Z FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3x3z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3X3Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3X3Z FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>~~</td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.51Å</td></tr>
-	~~<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=TYQ:3-AMINO-6-HYDROXY-TYROSINE'>TYQ</scene~~></td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=TYQ:3-AMINO-6-HYDROXY-TYROSINE'>TYQ</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3x3x\|3x3x]], [[3x3y\|3x3y]], [[3x40\|3x40]], [[3x41\|3x41]], [[3x42\|3x42]]</div></td></tr>	+
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Primary-amine_oxidase Primary-amine oxidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.3.21 1.4.3.21] </span></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3x3z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3x3z OCA], [https://pdbe.org/3x3z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3x3z RCSB], [https://www.ebi.ac.uk/pdbsum/3x3z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3x3z ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3x3z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3x3z OCA], [https://pdbe.org/3x3z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3x3z RCSB], [https://www.ebi.ac.uk/pdbsum/3x3z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3x3z ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/PAOX_ARTGO PAOX_ARTGO]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Arthrobacter globiformis]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Primary-amine oxidase]]~~	+	[[Category: Hamaguchi A]]
-	[[Category: Hamaguchi, A]]	+	[[Category: Hayashi H]]
-	[[Category: Hayashi, H]]	+	[[Category: Kataoka M]]
-	[[Category: Kataoka, M]]	+	[[Category: Kawano Y]]
-	[[Category: Kawano, Y]]	+	[[Category: Murakawa T]]
-	[[Category: Murakawa, T]]	+	[[Category: Nakai T]]
-	[[Category: Nakai, T]]	+	[[Category: Nakanishi S]]
-	[[Category: Nakanishi, S]]	+	[[Category: Okajima T]]
-	[[Category: Okajima, T]]	+	[[Category: Tanizawa K]]
-	[[Category: Tanizawa, K]]	+	[[Category: Yamaguchi H]]
-	[[Category: Yamaguchi, H]]	+
-	~~[[Category: Copper amine oxidase]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: Topaquinone]]~~	+
-	~~[[Category: Tpq~~]]	+

OCA at 05:40, 10 August 2022

OCA — Wed, 10 Aug 2022 05:40:35 GMT

←Older revision		Revision as of 05:40, 10 August 2022
Line 3:		Line 3:
	<StructureSection load='3x3z' size='340' side='right'caption='[[3x3z]], [[Resolution\|resolution]] 1.51Å' scene=''>		<StructureSection load='3x3z' size='340' side='right'caption='[[3x3z]], [[Resolution\|resolution]] 1.51Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3x3z]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"achromobacter_globiformis"_(conn_1928)_bergey_et_al._1930 "achromobacter globiformis" (conn 1928) bergey et al. 1930]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3X3Z OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3X3Z FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3x3z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"achromobacter_globiformis"_(conn_1928)_bergey_et_al._1930 "achromobacter globiformis" (conn 1928) bergey et al. 1930]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3X3Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3X3Z FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=TYQ:3-AMINO-6-HYDROXY-TYROSINE'>TYQ</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=TYQ:3-AMINO-6-HYDROXY-TYROSINE'>TYQ</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3x3x\|3x3x]], [[3x3y\|3x3y]], [[3x40\|3x40]], [[3x41\|3x41]], [[3x42\|3x42]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3x3x\|3x3x]], [[3x3y\|3x3y]], [[3x40\|3x40]], [[3x41\|3x41]], [[3x42\|3x42]]</div></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Primary-amine_oxidase Primary-amine oxidase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.3.21 1.4.3.21] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Primary-amine_oxidase Primary-amine oxidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.3.21 1.4.3.21] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3x3z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3x3z OCA], [~~http~~://pdbe.org/3x3z PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3x3z RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3x3z PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3x3z ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3x3z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3x3z OCA], [https://pdbe.org/3x3z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3x3z RCSB], [https://www.ebi.ac.uk/pdbsum/3x3z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3x3z ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 19:		Line 19:
	</div>		</div>
	<div class="pdbe-citations 3x3z" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 3x3z" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Copper amine oxidase 3D structures\|Copper amine oxidase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 09:59, 25 December 2019

OCA — Wed, 25 Dec 2019 09:59:06 GMT

←Older revision		Revision as of 09:59, 25 December 2019
Line 1:		Line 1:

	==Copper amine oxidase from Arthrobacter globiformis: Aminoresorcinol form produced by anaerobic reduction with ethylamine hydrochloride==		==Copper amine oxidase from Arthrobacter globiformis: Aminoresorcinol form produced by anaerobic reduction with ethylamine hydrochloride==
-	<StructureSection load='3x3z' size='340' side='right' caption='[[3x3z]], [[Resolution\|resolution]] 1.51Å' scene=''>	+	<StructureSection load='3x3z' size='340' side='right'caption='[[3x3z]], [[Resolution\|resolution]] 1.51Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3x3z]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"achromobacter_globiformis"_(conn_1928)_bergey_et_al._1930 "achromobacter globiformis" (conn 1928) bergey et al. 1930]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3X3Z OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3X3Z FirstGlance]. <br>		<table><tr><td colspan='2'>[[3x3z]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"achromobacter_globiformis"_(conn_1928)_bergey_et_al._1930 "achromobacter globiformis" (conn 1928) bergey et al. 1930]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3X3Z OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3X3Z FirstGlance]. <br>
Line 10:		Line 10:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3x3z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3x3z OCA], [http://pdbe.org/3x3z PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3x3z RCSB], [http://www.ebi.ac.uk/pdbsum/3x3z PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3x3z ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3x3z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3x3z OCA], [http://pdbe.org/3x3z PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3x3z RCSB], [http://www.ebi.ac.uk/pdbsum/3x3z PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3x3z ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The catalytic reaction of copper amine oxidase proceeds through a ping-pong mechanism comprising two half-reactions. In the initial half-reaction, the substrate amine reduces the Tyr-derived cofactor, topa quinone (TPQ), to an aminoresorcinol form (TPQamr) that is in equilibrium with a semiquinone radical (TPQsq) via an intramolecular electron transfer to the active-site copper. We have analyzed this reductive half-reaction in crystals of the copper amine oxidase from Arthrobacter globiformis. Anerobic soaking of the crystals with an amine substrate shifted the equilibrium toward TPQsq in an "on-copper" conformation, in which the 4-OH group ligated axially to the copper center, which was probably reduced to Cu(I). When the crystals were soaked with substrate in the presence of halide ions, which act as uncompetitive and noncompetitive inhibitors with respect to the amine substrate and dioxygen, respectively, the equilibrium in the crystals shifted toward the "off-copper" conformation of TPQamr. The halide ion was bound to the axial position of the copper center, thereby preventing TPQamr from adopting the on-copper conformation. Furthermore, transient kinetic analyses in the presence of viscogen (glycerol) revealed that only the rate constant in the step of TPQamr/TPQsq interconversion is markedly affected by the viscogen, which probably perturbs the conformational change. These findings unequivocally demonstrate that TPQ undergoes large conformational changes during the reductive half-reaction.
		+
		+	Probing the Catalytic Mechanism of Copper Amine Oxidase from Arthrobacter globiformis with Halide Ions.,Murakawa T, Hamaguchi A, Nakanishi S, Kataoka M, Nakai T, Kawano Y, Yamaguchi H, Hayashi H, Tanizawa K, Okajima T J Biol Chem. 2015 Sep 18;290(38):23094-109. doi: 10.1074/jbc.M115.662726. Epub, 2015 Aug 11. PMID:26269595<ref>PMID:26269595</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 3x3z" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Primary-amine oxidase]]		[[Category: Primary-amine oxidase]]
	[[Category: Hamaguchi, A]]		[[Category: Hamaguchi, A]]

OCA at 16:41, 27 February 2019

OCA — Wed, 27 Feb 2019 16:41:15 GMT

←Older revision		Revision as of 16:41, 27 February 2019
Line 3:		Line 3:
	<StructureSection load='3x3z' size='340' side='right' caption='[[3x3z]], [[Resolution\|resolution]] 1.51Å' scene=''>		<StructureSection load='3x3z' size='340' side='right' caption='[[3x3z]], [[Resolution\|resolution]] 1.51Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3x3z]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3X3Z OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3X3Z FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3x3z]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"achromobacter_globiformis"_(conn_1928)_bergey_et_al._1930 "achromobacter globiformis" (conn 1928) bergey et al. 1930]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3X3Z OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3X3Z FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=TYQ:3-AMINO-6-HYDROXY-TYROSINE'>TYQ</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=TYQ:3-AMINO-6-HYDROXY-TYROSINE'>TYQ</scene></td></tr>

OCA at 14:16, 24 May 2017

OCA — Wed, 24 May 2017 14:16:11 GMT

←Older revision		Revision as of 14:16, 24 May 2017
Line 1:		Line 1:
		+
	==Copper amine oxidase from Arthrobacter globiformis: Aminoresorcinol form produced by anaerobic reduction with ethylamine hydrochloride==		==Copper amine oxidase from Arthrobacter globiformis: Aminoresorcinol form produced by anaerobic reduction with ethylamine hydrochloride==
	<StructureSection load='3x3z' size='340' side='right' caption='[[3x3z]], [[Resolution\|resolution]] 1.51Å' scene=''>		<StructureSection load='3x3z' size='340' side='right' caption='[[3x3z]], [[Resolution\|resolution]] 1.51Å' scene=''>
Line 7:		Line 8:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3x3x\|3x3x]], [[3x3y\|3x3y]], [[3x40\|3x40]], [[3x41\|3x41]], [[3x42\|3x42]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3x3x\|3x3x]], [[3x3y\|3x3y]], [[3x40\|3x40]], [[3x41\|3x41]], [[3x42\|3x42]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Primary-amine_oxidase Primary-amine oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.3.21 1.4.3.21] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Primary-amine_oxidase Primary-amine oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.3.21 1.4.3.21] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3x3z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3x3z OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3x3z RCSB], [http://www.ebi.ac.uk/pdbsum/3x3z PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3x3z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3x3z OCA], [http://pdbe.org/3x3z PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3x3z RCSB], [http://www.ebi.ac.uk/pdbsum/3x3z PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3x3z ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__

OCA at 12:21, 20 August 2015

OCA — Thu, 20 Aug 2015 12:21:21 GMT

←Older revision		Revision as of 12:21, 20 August 2015
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==Copper amine oxidase from Arthrobacter globiformis: Aminoresorcinol form produced by anaerobic reduction with ethylamine hydrochloride==
-		+	<StructureSection load='3x3z' size='340' side='right' caption='[[3x3z]], [[Resolution\|resolution]] 1.51Å' scene=''>
-	~~The entry~~ 3x3z is ~~ON HOLD until Paper Publication~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[3x3z]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3X3Z OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3X3Z FirstGlance]. <br>
-	~~Authors~~: ~~Okajima, T~~.~~, Nakanishi, S~~.~~, Murakawa, T~~.~~, Kataoka, M~~.~~, Hayashi, H~~.~~, Hamaguchi, A~~., ~~Nakai~~, T., ~~Kawano~~, Y., ~~Yamaguchi~~, H., ~~Tanizawa~~, K.	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=TYQ:3-AMINO-6-HYDROXY-TYROSINE'>TYQ</scene></td></tr>
-	~~Description~~: ~~Copper~~ amine oxidase ~~from Arthrobacter globiformis: Aminoresorcinol form produced by anaerobic reduction~~ with ~~ethylamine hydrochloride~~	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3x3x\|3x3x]], [[3x3y\|3x3y]], [[3x40\|3x40]], [[3x41\|3x41]], [[3x42\|3x42]]</td></tr>
-	[~~[Category~~: ~~Unreleased Structures]~~]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Primary-amine_oxidase Primary-amine oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.3.21 1.4.3.21] </span></td></tr>
-	[[~~Category~~: ~~Yamaguchi~~, H]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3x3z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3x3z OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3x3z RCSB], [http://www.ebi.ac.uk/pdbsum/3x3z PDBsum]</span></td></tr>
-	[[Category: ~~Hayashi, H~~]]	+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Primary-amine oxidase]]
	[[Category: Hamaguchi, A]]		[[Category: Hamaguchi, A]]
-	[[Category: ~~Nakanishi~~, S]]	+	[[Category: Hayashi, H]]
-	[[Category: ~~Tanizawa~~, K]]	+	[[Category: Kataoka, M]]
	[[Category: Kawano, Y]]		[[Category: Kawano, Y]]
-	[[Category: Nakai, T]]
	[[Category: Murakawa, T]]		[[Category: Murakawa, T]]
		+	[[Category: Nakai, T]]
		+	[[Category: Nakanishi, S]]
	[[Category: Okajima, T]]		[[Category: Okajima, T]]
-	[[Category: ~~Kataoka~~, M]]	+	[[Category: Tanizawa, K]]
		+	[[Category: Yamaguchi, H]]
		+	[[Category: Copper amine oxidase]]
		+	[[Category: Oxidoreductase]]
		+	[[Category: Topaquinone]]
		+	[[Category: Tpq]]

OCA at 06:20, 30 April 2015

OCA — Thu, 30 Apr 2015 06:20:53 GMT

←Older revision		Revision as of 06:20, 30 April 2015
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3x3z is ON HOLD	+	The entry 3x3z is ON HOLD until Paper Publication

	Authors: Okajima, T., Nakanishi, S., Murakawa, T., Kataoka, M., Hayashi, H., Hamaguchi, A., Nakai, T., Kawano, Y., Yamaguchi, H., Tanizawa, K.		Authors: Okajima, T., Nakanishi, S., Murakawa, T., Kataoka, M., Hayashi, H., Hamaguchi, A., Nakai, T., Kawano, Y., Yamaguchi, H., Tanizawa, K.

OCA: Protected "3x3z" [edit=sysop:move=sysop]

OCA — Wed, 18 Mar 2015 07:14:06 GMT

Protected "3x3z" [edit=sysop:move=sysop]

←Older revision

Revision as of 07:14, 18 March 2015

OCA: New page: '''Unreleased structure''' The entry 3x3z is ON HOLD Authors: Okajima, T., Nakanishi, S., Murakawa, T., Kataoka, M., Hayashi, H., Hamaguchi, A., Nakai, T., Kawano, Y., Yamaguchi, H., Ta...

OCA — Wed, 18 Mar 2015 07:14:04 GMT

New page: '''Unreleased structure''' The entry 3x3z is ON HOLD Authors: Okajima, T., Nakanishi, S., Murakawa, T., Kataoka, M., Hayashi, H., Hamaguchi, A., Nakai, T., Kawano, Y., Yamaguchi, H., Ta...

New page

'''Unreleased structure'''

The entry 3x3z is ON HOLD

Authors: Okajima, T., Nakanishi, S., Murakawa, T., Kataoka, M., Hayashi, H., Hamaguchi, A., Nakai, T., Kawano, Y., Yamaguchi, H., Tanizawa, K.

Description: Copper amine oxidase from Arthrobacter globiformis: Aminoresorcinol form produced by anaerobic reduction with ethylamine hydrochloride
[[Category: Unreleased Structures]]
[[Category: Yamaguchi, H]]
[[Category: Hayashi, H]]
[[Category: Hamaguchi, A]]
[[Category: Nakanishi, S]]
[[Category: Tanizawa, K]]
[[Category: Kawano, Y]]
[[Category: Nakai, T]]
[[Category: Murakawa, T]]
[[Category: Okajima, T]]
[[Category: Kataoka, M]]