3zoq - Revision history

OCA at 11:08, 20 December 2023

OCA — Wed, 20 Dec 2023 11:08:42 GMT

←Older revision		Revision as of 11:08, 20 December 2023
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	<StructureSection load='3zoq' size='340' side='right'caption='[[3zoq]], [[Resolution\|resolution]] 1.45Å' scene=''>		<StructureSection load='3zoq' size='340' side='right'caption='[[3zoq]], [[Resolution\|resolution]] 1.45Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3zoq]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Bacsu Bacsu~~] and [https://en.wikipedia.org/wiki/~~Bpph2 Bpph2~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZOQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZOQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3zoq]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168] and [https://en.wikipedia.org/wiki/Bacillus_virus_phi29 Bacillus virus phi29]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZOQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZOQ FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>~~, ~~<scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.45Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height: 3em;~~'>~~[[3zor\|3zor]]~~</~~div~~><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b></td><td class="sblockDat"><span class='plainlinks~~'>~~[https://en.wikipedia.org/wiki/Uracil-DNA_glycosylase Uracil-DNA glycosylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.27 3.2.2.27]~~ </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zoq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zoq OCA], [https://pdbe.org/3zoq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zoq RCSB], [https://www.ebi.ac.uk/pdbsum/3zoq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zoq ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zoq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zoq OCA], [https://pdbe.org/3zoq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zoq RCSB], [https://www.ebi.ac.uk/pdbsum/3zoq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zoq ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/UNG_BACSU UNG_BACSU]] Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (By similarity).	+	[https://www.uniprot.org/uniprot/UNG_BACSU UNG_BACSU] Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (By similarity).
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 27:		Line 26:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacsu~~]]	+	[[Category: Bacillus subtilis subsp. subtilis str. 168]]
-	[[Category: ~~Bpph2~~]]	+	[[Category: Bacillus virus phi29]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Uracil-DNA glycosylase]]~~	+	[[Category: Banos-Sanz JI]]
-	[[Category: Banos-Sanz~~, J I~~]]	+	[[Category: Gonzalez B]]
-	[[Category: Gonzalez, B]]	+	[[Category: Mojardin L]]
-	[[Category: Mojardin, L]]	+	[[Category: Salas M]]
-	[[Category: Salas, M]]	+	[[Category: Sanz-Aparicio J]]
-	[[Category: Sanz-Aparicio, J]]	+
-	~~[[Category: Hydrolase-viral protein complex~~]]	+

OCA at 07:06, 18 August 2022

OCA — Thu, 18 Aug 2022 07:06:06 GMT

←Older revision		Revision as of 07:06, 18 August 2022
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	==Structure of BsUDG-p56 complex==		==Structure of BsUDG-p56 complex==
-	<StructureSection load='3zoq' size='340' side='right' caption='[[3zoq]], [[Resolution\|resolution]] 1.45Å' scene=''>	+	<StructureSection load='3zoq' size='340' side='right'caption='[[3zoq]], [[Resolution\|resolution]] 1.45Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3zoq]] is a 3 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Bacsu Bacsu] and [~~http~~://en.wikipedia.org/wiki/Bpph2 Bpph2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZOQ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3ZOQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3zoq]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacsu Bacsu] and [https://en.wikipedia.org/wiki/Bpph2 Bpph2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZOQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZOQ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3zor\|3zor]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3zor\|3zor]]</div></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Uracil-DNA_glycosylase Uracil-DNA glycosylase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.27 3.2.2.27] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Uracil-DNA_glycosylase Uracil-DNA glycosylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.27 3.2.2.27] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3zoq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zoq OCA], [~~http~~://pdbe.org/3zoq PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3zoq RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3zoq PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3zoq ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zoq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zoq OCA], [https://pdbe.org/3zoq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zoq RCSB], [https://www.ebi.ac.uk/pdbsum/3zoq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zoq ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/UNG_BACSU UNG_BACSU]] Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (By similarity).	+	[[https://www.uniprot.org/uniprot/UNG_BACSU UNG_BACSU]] Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (By similarity).
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 22:		Line 22:

	==See Also==		==See Also==
-	*[[DNA glycosylase\|DNA glycosylase]]	+	*[[DNA glycosylase 3D structures\|DNA glycosylase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 29:		Line 29:
	[[Category: Bacsu]]		[[Category: Bacsu]]
	[[Category: Bpph2]]		[[Category: Bpph2]]
		+	[[Category: Large Structures]]
	[[Category: Uracil-DNA glycosylase]]		[[Category: Uracil-DNA glycosylase]]
	[[Category: Banos-Sanz, J I]]		[[Category: Banos-Sanz, J I]]

OCA at 08:02, 6 March 2019

OCA — Wed, 06 Mar 2019 08:02:07 GMT

←Older revision		Revision as of 08:02, 6 March 2019
Line 1:		Line 1:

	==Structure of BsUDG-p56 complex==		==Structure of BsUDG-p56 complex==
-	<StructureSection load='3zoq' size='340' side='right' caption='[[3zoq]], [[Resolution\|resolution]] 1.45Å' scene=''>	+	<StructureSection load='3zoq' size='340' side='right' caption='[[3zoq]], [[Resolution\|resolution]] 1.45Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3zoq]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacsu Bacsu] and [http://en.wikipedia.org/wiki/Bpph2 Bpph2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZOQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZOQ FirstGlance]. <br>		<table><tr><td colspan='2'>[[3zoq]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacsu Bacsu] and [http://en.wikipedia.org/wiki/Bpph2 Bpph2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZOQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZOQ FirstGlance]. <br>

OCA at 16:48, 27 February 2019

OCA — Wed, 27 Feb 2019 16:48:23 GMT

←Older revision		Revision as of 16:48, 27 February 2019
Line 23:		Line 23:
	==See Also==		==See Also==
	*[[DNA glycosylase\|DNA glycosylase]]		*[[DNA glycosylase\|DNA glycosylase]]
-	*[[Uracil-DNA glycosylase\|Uracil-DNA glycosylase]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 20:39, 4 August 2016

OCA — Thu, 04 Aug 2016 20:39:31 GMT

←Older revision		Revision as of 20:39, 4 August 2016
Line 1:		Line 1:
		+
	==Structure of BsUDG-p56 complex==		==Structure of BsUDG-p56 complex==
	<StructureSection load='3zoq' size='340' side='right' caption='[[3zoq]], [[Resolution\|resolution]] 1.45Å' scene=''>		<StructureSection load='3zoq' size='340' side='right' caption='[[3zoq]], [[Resolution\|resolution]] 1.45Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3zoq]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacillus_phage_phi29 Bacillus phage phi29~~] and [http://en.wikipedia.org/wiki/~~Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZOQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZOQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3zoq]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacsu Bacsu] and [http://en.wikipedia.org/wiki/Bpph2 Bpph2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZOQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZOQ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3zor\|3zor]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3zor\|3zor]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Uracil-DNA_glycosylase Uracil-DNA glycosylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.27 3.2.2.27] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Uracil-DNA_glycosylase Uracil-DNA glycosylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.27 3.2.2.27] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zoq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zoq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3zoq RCSB], [http://www.ebi.ac.uk/pdbsum/3zoq PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zoq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zoq OCA], [http://pdbe.org/3zoq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3zoq RCSB], [http://www.ebi.ac.uk/pdbsum/3zoq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3zoq ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 18:		Line 19:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3zoq" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
		+	*[[DNA glycosylase\|DNA glycosylase]]
	*[[Uracil-DNA glycosylase\|Uracil-DNA glycosylase]]		*[[Uracil-DNA glycosylase\|Uracil-DNA glycosylase]]
	== References ==		== References ==
Line 25:		Line 28:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacillus phage phi29~~]]	+	[[Category: Bacsu]]
-	[[Category: ~~Bacillus subtilis subsp. subtilis str. 168~~]]	+	[[Category: Bpph2]]
	[[Category: Uracil-DNA glycosylase]]		[[Category: Uracil-DNA glycosylase]]
	[[Category: Banos-Sanz, J I]]		[[Category: Banos-Sanz, J I]]

OCA at 12:58, 25 December 2014

OCA — Thu, 25 Dec 2014 12:58:07 GMT

←Older revision		Revision as of 12:58, 25 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3zoq\| PDB~~=3zoq \| ~~SCENE~~= }}	+	==Structure of BsUDG-p56 complex==
-	===~~Structure of BsUDG~~-~~p56 complex~~===	+	<StructureSection load='3zoq' size='340' side='right' caption='[[3zoq]], [[Resolution\|resolution]] 1.45Å' scene=''>
-	~~{{ABSTRACT_PUBMED_23671337}}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[3zoq]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_phage_phi29 Bacillus phage phi29] and [http://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZOQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZOQ FirstGlance]. <br>
-	==Function==	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3zor\|3zor]]</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Uracil-DNA_glycosylase Uracil-DNA glycosylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.27 3.2.2.27] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zoq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zoq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3zoq RCSB], [http://www.ebi.ac.uk/pdbsum/3zoq PDBsum]</span></td></tr>
		+	</table>
		+	== Function ==
	[[http://www.uniprot.org/uniprot/UNG_BACSU UNG_BACSU]] Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (By similarity).		[[http://www.uniprot.org/uniprot/UNG_BACSU UNG_BACSU]] Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (By similarity).
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Uracil-DNA glycosylase (UDG) is a key repair enzyme responsible for removing uracil residues from DNA. Interestingly, UDG is the only enzyme known to be inhibited by two different DNA mimic proteins: p56 encoded by the Bacillus subtilis phage 29 and the well-characterized protein Ugi encoded by the B. subtilis phage PBS1/PBS2. Atomic-resolution crystal structures of the B. subtilis UDG both free and in complex with p56, combined with site-directed mutagenesis analysis, allowed us to identify the key amino acid residues required for enzyme activity, DNA binding and complex formation. An important requirement for complex formation is the recognition carried out by p56 of the protruding Phe191 residue from B. subtilis UDG, whose side-chain is inserted into the DNA minor groove to replace the flipped-out uracil. A comparative analysis of both p56 and Ugi inhibitors enabled us to identify their common and distinctive features. Thereby, our results provide an insight into how two DNA mimic proteins with different structural and biochemical properties are able to specifically block the DNA-binding domain of the same enzyme.
		+
		+	Crystal structure and functional insights into uracil-DNA glycosylase inhibition by phage 29 DNA mimic protein p56.,Banos-Sanz JI, Mojardin L, Sanz-Aparicio J, Lazaro JM, Villar L, Serrano-Heras G, Gonzalez B, Salas M Nucleic Acids Res. 2013 May 13. PMID:23671337<ref>PMID:23671337</ref>

-	~~==About this Structure==~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~[[3zoq]] is~~ a ~~3 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Bacillus_phage_phi29 Bacillus phage phi29] and [http://en~~.~~wikipedia.org~~/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZOQ OCA].	+	</div>

-	==~~Reference~~==	+	==See Also==
-	~~<ref group~~=~~"xtra">PMID:023671337</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	*[[Uracil-DNA glycosylase\|Uracil-DNA glycosylase]]
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Bacillus phage phi29]]		[[Category: Bacillus phage phi29]]
	[[Category: Bacillus subtilis subsp. subtilis str. 168]]		[[Category: Bacillus subtilis subsp. subtilis str. 168]]
	[[Category: Uracil-DNA glycosylase]]		[[Category: Uracil-DNA glycosylase]]
-	[[Category: Banos-Sanz, J I.]]	+	[[Category: Banos-Sanz, J I]]
-	[[Category: Gonzalez, B.]]	+	[[Category: Gonzalez, B]]
-	[[Category: Mojardin, L.]]	+	[[Category: Mojardin, L]]
-	[[Category: Salas, M.]]	+	[[Category: Salas, M]]
-	[[Category: Sanz-Aparicio, J.]]	+	[[Category: Sanz-Aparicio, J]]
	[[Category: Hydrolase-viral protein complex]]		[[Category: Hydrolase-viral protein complex]]

OCA at 15:50, 19 June 2013

OCA — Wed, 19 Jun 2013 15:50:57 GMT

←Older revision		Revision as of 15:50, 19 June 2013
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-	~~'''Unreleased structure'''~~	+	{{STRUCTURE_3zoq\| PDB=3zoq \| SCENE= }}
		+	===Structure of BsUDG-p56 complex===
		+	{{ABSTRACT_PUBMED_23671337}}

-	~~The entry 3zoq is ON HOLD until Paper Publication~~	+	==Function==
		+	[[http://www.uniprot.org/uniprot/UNG_BACSU UNG_BACSU]] Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (By similarity).

-	~~Authors~~: ~~Banos-Sanz, J~~.I.~~, Sanz-Aparicio, J~~.~~, Gonzalez, B~~.	+	==About this Structure==
		+	[[3zoq]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_phage_phi29 Bacillus phage phi29] and [http://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZOQ OCA].

-	~~Description~~: ~~Structure of BsUDG~~-~~p56~~ complex	+	==Reference==
		+	<ref group="xtra">PMID:023671337</ref><references group="xtra"/><references/>
		+	[[Category: Bacillus phage phi29]]
		+	[[Category: Bacillus subtilis subsp. subtilis str. 168]]
		+	[[Category: Uracil-DNA glycosylase]]
		+	[[Category: Banos-Sanz, J I.]]
		+	[[Category: Gonzalez, B.]]
		+	[[Category: Mojardin, L.]]
		+	[[Category: Salas, M.]]
		+	[[Category: Sanz-Aparicio, J.]]
		+	[[Category: Hydrolase-viral protein complex]]

OCA: Protected "3zoq" [edit=sysop:move=sysop]

OCA — Wed, 06 Mar 2013 13:35:38 GMT

Protected "3zoq" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:35, 6 March 2013

OCA: New page: '''Unreleased structure''' The entry 3zoq is ON HOLD until Paper Publication Authors: Banos-Sanz, J.I., Sanz-Aparicio, J., Gonzalez, B. Description: Structure of BsUDG-p56 complex

OCA — Wed, 06 Mar 2013 13:35:37 GMT

New page: '''Unreleased structure''' The entry 3zoq is ON HOLD until Paper Publication Authors: Banos-Sanz, J.I., Sanz-Aparicio, J., Gonzalez, B. Description: Structure of BsUDG-p56 complex

New page

'''Unreleased structure'''

The entry 3zoq is ON HOLD until Paper Publication

Authors: Banos-Sanz, J.I., Sanz-Aparicio, J., Gonzalez, B.

Description: Structure of BsUDG-p56 complex