3ztp - Revision history

OCA at 11:12, 20 December 2023

OCA — Wed, 20 Dec 2023 11:12:37 GMT

←Older revision		Revision as of 11:12, 20 December 2023
Line 3:		Line 3:
	<StructureSection load='3ztp' size='340' side='right'caption='[[3ztp]], [[Resolution\|resolution]] 1.37Å' scene=''>		<StructureSection load='3ztp' size='340' side='right'caption='[[3ztp]], [[Resolution\|resolution]] 1.37Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ztp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"aquifex_aeolicus"_huber_and_stetter_2001 "aquifex~~ aeolicus~~" huber and stetter 2001~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZTP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ztp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZTP FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>~~, ~~<scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.37Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height: 3em;~~'>~~[[3zts\|3zts]], [[3ztr\|3ztr]], [[3ztq\|3ztq]], [[3zto\|3zto]]~~</~~div~~><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b></td><td class="sblockDat"><span class='plainlinks~~'>~~[https://en.wikipedia.org/wiki/Nucleoside-diphosphate_kinase Nucleoside-diphosphate kinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.6 2.7.4.6]~~ </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ztp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ztp OCA], [https://pdbe.org/3ztp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ztp RCSB], [https://www.ebi.ac.uk/pdbsum/3ztp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ztp ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ztp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ztp OCA], [https://pdbe.org/3ztp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ztp RCSB], [https://www.ebi.ac.uk/pdbsum/3ztp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ztp ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/NDK_AQUAE NDK_AQUAE]] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (By similarity).	+	[https://www.uniprot.org/uniprot/NDK_AQUAE NDK_AQUAE] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (By similarity).
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 27:		Line 26:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Aquifex aeolicus ~~huber and stetter 2001~~]]	+	[[Category: Aquifex aeolicus]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Nucleoside-diphosphate kinase]]~~	+	[[Category: Boissier F]]
-	[[Category: Boissier, F]]	+	[[Category: Dautant A]]
-	[[Category: Dautant, A]]	+	[[Category: Dupuy J-W]]
-	[[Category: Dupuy, J W]]	+	[[Category: Georgescauld F]]
-	[[Category: Georgescauld, F]]	+	[[Category: Giraud M-F]]
-	[[Category: Giraud, M F]]	+	[[Category: Lascu I]]
-	[[Category: Lascu, I]]	+	[[Category: Moynie L]]
-	[[Category: Moynie, L]]	+	[[Category: Podar M]]
-	[[Category: Podar, M]]	+	[[Category: Sarger C]]
-	[[Category: Sarger, C]]	+
-	~~[[Category: Transferase~~]]	+

OCA at 07:17, 18 August 2022

OCA — Thu, 18 Aug 2022 07:17:14 GMT

←Older revision		Revision as of 07:17, 18 August 2022
Line 1:		Line 1:

	==Orthorhombic crystal form P21212 of the Aquifex aeolicus nucleoside diphosphate kinase==		==Orthorhombic crystal form P21212 of the Aquifex aeolicus nucleoside diphosphate kinase==
-	<StructureSection load='3ztp' size='340' side='right' caption='[[3ztp]], [[Resolution\|resolution]] 1.37Å' scene=''>	+	<StructureSection load='3ztp' size='340' side='right'caption='[[3ztp]], [[Resolution\|resolution]] 1.37Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ztp]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"aquifex_aeolicus"_huber_and_stetter_2001 "aquifex aeolicus" huber and stetter 2001]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTP OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3ZTP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ztp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"aquifex_aeolicus"_huber_and_stetter_2001 "aquifex aeolicus" huber and stetter 2001]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZTP FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3zts\|3zts]], [[3ztr\|3ztr]], [[3ztq\|3ztq]], [[3zto\|3zto]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3zts\|3zts]], [[3ztr\|3ztr]], [[3ztq\|3ztq]], [[3zto\|3zto]]</div></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Nucleoside-diphosphate_kinase Nucleoside-diphosphate kinase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.6 2.7.4.6] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Nucleoside-diphosphate_kinase Nucleoside-diphosphate kinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.6 2.7.4.6] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3ztp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ztp OCA], [~~http~~://pdbe.org/3ztp PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3ztp RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3ztp PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3ztp ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ztp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ztp OCA], [https://pdbe.org/3ztp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ztp RCSB], [https://www.ebi.ac.uk/pdbsum/3ztp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ztp ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/NDK_AQUAE NDK_AQUAE]] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (By similarity).	+	[[https://www.uniprot.org/uniprot/NDK_AQUAE NDK_AQUAE]] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (By similarity).
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 22:		Line 22:

	==See Also==		==See Also==
-	*[[Nucleoside diphosphate kinase\|Nucleoside diphosphate kinase]]	+	*[[Nucleoside diphosphate kinase 3D structures\|Nucleoside diphosphate kinase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 28:		Line 28:
	</StructureSection>		</StructureSection>
	[[Category: Aquifex aeolicus huber and stetter 2001]]		[[Category: Aquifex aeolicus huber and stetter 2001]]
		+	[[Category: Large Structures]]
	[[Category: Nucleoside-diphosphate kinase]]		[[Category: Nucleoside-diphosphate kinase]]
	[[Category: Boissier, F]]		[[Category: Boissier, F]]

OCA at 18:10, 4 August 2016

OCA — Thu, 04 Aug 2016 18:10:44 GMT

←Older revision		Revision as of 18:10, 4 August 2016
Line 1:		Line 1:
		+
	==Orthorhombic crystal form P21212 of the Aquifex aeolicus nucleoside diphosphate kinase==		==Orthorhombic crystal form P21212 of the Aquifex aeolicus nucleoside diphosphate kinase==
	<StructureSection load='3ztp' size='340' side='right' caption='[[3ztp]], [[Resolution\|resolution]] 1.37Å' scene=''>		<StructureSection load='3ztp' size='340' side='right' caption='[[3ztp]], [[Resolution\|resolution]] 1.37Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ztp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Aquifex_aeolicus Aquifex~~ aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZTP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ztp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"aquifex_aeolicus"_huber_and_stetter_2001 "aquifex aeolicus" huber and stetter 2001]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZTP FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3zts\|3zts]], [[3ztr\|3ztr]], [[3ztq\|3ztq]], [[3zto\|3zto]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3zts\|3zts]], [[3ztr\|3ztr]], [[3ztq\|3ztq]], [[3zto\|3zto]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nucleoside-diphosphate_kinase Nucleoside-diphosphate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.6 2.7.4.6] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nucleoside-diphosphate_kinase Nucleoside-diphosphate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.6 2.7.4.6] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ztp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ztp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ztp RCSB], [http://www.ebi.ac.uk/pdbsum/3ztp PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ztp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ztp OCA], [http://pdbe.org/3ztp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ztp RCSB], [http://www.ebi.ac.uk/pdbsum/3ztp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ztp ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 18:		Line 19:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3ztp" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 25:		Line 27:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Aquifex aeolicus]]	+	[[Category: Aquifex aeolicus huber and stetter 2001]]
	[[Category: Nucleoside-diphosphate kinase]]		[[Category: Nucleoside-diphosphate kinase]]
	[[Category: Boissier, F]]		[[Category: Boissier, F]]

OCA at 18:02, 24 December 2014

OCA — Wed, 24 Dec 2014 18:02:49 GMT

←Older revision		Revision as of 18:02, 24 December 2014
Line 8:		Line 8:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ztp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ztp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ztp RCSB], [http://www.ebi.ac.uk/pdbsum/3ztp PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ztp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ztp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ztp RCSB], [http://www.ebi.ac.uk/pdbsum/3ztp PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/NDK_AQUAE NDK_AQUAE]] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (By similarity).
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 16:43, 9 December 2014

OCA — Tue, 09 Dec 2014 16:43:06 GMT

←Older revision		Revision as of 16:43, 9 December 2014
Line 1:		Line 1:
-	[[~~Image:~~3ztp.~~png~~\|~~left~~\|~~200px~~]]	+	==Orthorhombic crystal form P21212 of the Aquifex aeolicus nucleoside diphosphate kinase==
		+	<StructureSection load='3ztp' size='340' side='right' caption='[[3ztp]], [[Resolution\|resolution]] 1.37Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3ztp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZTP FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3zts\|3zts]], [[3ztr\|3ztr]], [[3ztq\|3ztq]], [[3zto\|3zto]]</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nucleoside-diphosphate_kinase Nucleoside-diphosphate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.6 2.7.4.6] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ztp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ztp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ztp RCSB], [http://www.ebi.ac.uk/pdbsum/3ztp PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The nucleoside diphosphate kinase (Ndk) catalyzes the reversible transfer of the gamma-phosphate from nucleoside triphosphate to nucleoside diphosphate. Ndks form hexamers or two types of tetramers made of the same building block, namely, the common dimer. The secondary interfaces of the Type I tetramer found in Myxococcus xanthus Ndk and of the Type II found in Escherichia coli Ndk involve the opposite sides of subunits. Up to now, the few available structures of Ndk from thermophiles were hexameric. Here, we determined the X-ray structures of four crystal forms of the Ndk from the hyperthermophilic bacterium Aquifex aeolicus (Aa-Ndk). Aa-Ndk displays numerous features of thermostable proteins and is made of the common dimer but it is a tetramer of Type I. Indeed, the insertion of three residues in a surface-exposed spiral loop, named the Kpn-loop, leads to the formation of a two-turn alpha-helix that prevents both hexamer and Type II tetramer assembly. Moreover, the side chain of the cysteine at position 133, which is not present in other Ndk sequences, adopts two alternate conformations. Through the secondary interface, each one forms a disulfide bridge with the equivalent Cys133 from the neighboring subunit. This disulfide bridge was progressively broken during X-ray data collection by radiation damage. Such crosslinks counterbalance the weakness of the common-dimer interface. A 40% decrease of the kinase activity at 60 degrees C after reduction and alkylation of the protein corroborates the structural relevance of the disulfide bridge on the tetramer assembly and enzymatic function. Proteins 2012. (c) 2012 Wiley Periodicals, Inc.

-	~~{{STRUCTURE_3ztp\| PDB=3ztp \| SCENE= }}~~	+	An intersubunit disulfide bridge stabilizes the tetrameric nucleoside diphosphate kinase of Aquifex aeolicus.,Boissier F, Georgescauld F, Moynie L, Dupuy JW, Sarger C, Podar M, Lascu I, Giraud MF, Dautant A Proteins. 2012 Jun;80(6):1658-68. doi: 10.1002/prot.24062. Epub 2012 Mar 29. PMID:22467275<ref>PMID:22467275</ref>

-	~~===Orthorhombic crystal form P21212~~ of the ~~Aquifex aeolicus nucleoside diphosphate kinase===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_22467275}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[3ztp]] is a 2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Aquifex_aeolicus Aquifex aeolicus]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTP OCA].~~	+

	==See Also==		==See Also==
	*[[Nucleoside diphosphate kinase\|Nucleoside diphosphate kinase]]		*[[Nucleoside diphosphate kinase\|Nucleoside diphosphate kinase]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:022467275<~~/~~ref~~><~~ref group="xtra">PMID:017330300</ref><ref group="xtra">PMID:008263923</ref><references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Aquifex aeolicus]]		[[Category: Aquifex aeolicus]]
	[[Category: Nucleoside-diphosphate kinase]]		[[Category: Nucleoside-diphosphate kinase]]
-	[[Category: Boissier, F.]]	+	[[Category: Boissier, F]]
-	[[Category: Dautant, A.]]	+	[[Category: Dautant, A]]
-	[[Category: Dupuy, J W.]]	+	[[Category: Dupuy, J W]]
-	[[Category: Georgescauld, F.]]	+	[[Category: Georgescauld, F]]
-	[[Category: Giraud, M F.]]	+	[[Category: Giraud, M F]]
-	[[Category: Lascu, I.]]	+	[[Category: Lascu, I]]
-	[[Category: Moynie, L.]]	+	[[Category: Moynie, L]]
-	[[Category: Podar, M.]]	+	[[Category: Podar, M]]
-	[[Category: Sarger, C.]]	+	[[Category: Sarger, C]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA at 07:46, 20 October 2012

OCA — Sat, 20 Oct 2012 07:46:48 GMT

←Older revision		Revision as of 07:46, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[3ztp]] is a 2 chain structure ~~of [[Nucleoside diphosphate kinase]]~~ with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTP OCA].	+	[[3ztp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTP OCA].

	==See Also==		==See Also==

OCA at 17:24, 25 July 2012

OCA — Wed, 25 Jul 2012 17:24:45 GMT

←Older revision		Revision as of 17:24, 25 July 2012
Line 1:		Line 1:
	[[Image:3ztp.png\|left\|200px]]		[[Image:3ztp.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3ztp", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3ztp\| PDB=3ztp \| SCENE= }}		{{STRUCTURE_3ztp\| PDB=3ztp \| SCENE= }}

	===Orthorhombic crystal form P21212 of the Aquifex aeolicus nucleoside diphosphate kinase===		===Orthorhombic crystal form P21212 of the Aquifex aeolicus nucleoside diphosphate kinase===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_22467275}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 22467275 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_22467275}}		{{ABSTRACT_PUBMED_22467275}}

OCA at 05:22, 23 May 2012

OCA — Wed, 23 May 2012 05:22:45 GMT

←Older revision		Revision as of 05:22, 23 May 2012
Line 1:		Line 1:
-	[[Image:3ztp.~~jpg~~\|left\|200px]]	+	[[Image:3ztp.png\|left\|200px]]

	<!--		<!--
Line 13:		Line 13:

	<!--		<!--
-	The line below this paragraph, {{~~ABSTRACT_PUBMED_17330300~~}}, adds the Publication Abstract to the page	+	The line below this paragraph, {{ABSTRACT_PUBMED_22467275}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where ~~17330300~~ is the PubMed ID number.	+	(as it appears on PubMed at http://www.pubmed.gov), where 22467275 is the PubMed ID number.
	-->		-->
-	{{~~ABSTRACT_PUBMED_17330300~~}}	+	{{ABSTRACT_PUBMED_22467275}}

	==About this Structure==		==About this Structure==
-	[[3ztp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTP OCA].	+	[[3ztp]] is a 2 chain structure of [[Nucleoside diphosphate kinase]] with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTP OCA].
		+
		+	==See Also==
		+	*[[Nucleoside diphosphate kinase\|Nucleoside diphosphate kinase]]

	==Reference==		==Reference==
-	<ref group="xtra">PMID:017330300</ref><ref group="xtra">PMID:008263923</ref><references group="xtra"/>	+	<ref group="xtra">PMID:022467275</ref><ref group="xtra">PMID:017330300</ref><ref group="xtra">PMID:008263923</ref><references group="xtra"/>
	[[Category: Aquifex aeolicus]]		[[Category: Aquifex aeolicus]]
	[[Category: Nucleoside-diphosphate kinase]]		[[Category: Nucleoside-diphosphate kinase]]

OCA at 06:47, 14 March 2012

OCA — Wed, 14 Mar 2012 06:47:54 GMT

←Older revision		Revision as of 06:47, 14 March 2012
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-	~~'''Unreleased structure'''~~	+	[[Image:3ztp.jpg\|left\|200px]]

-	The ~~entry 3ztp~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3ztp", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3ztp\| PDB=3ztp \| SCENE= }}

-	~~Authors: Boissier, F., Georgescauld, F., Moynie, L., Dupuy, J.-W., Sarget, C., Giraud, M.-F., Podar, M., Dautant, A.~~	+	===Orthorhombic crystal form P21212 of the Aquifex aeolicus nucleoside diphosphate kinase===

-	~~Description~~: ~~Orthorhombic crystal form P21212 of~~ the Aquifex aeolicus ~~nucleoside~~ diphosphate kinase	+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_17330300}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 17330300 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_17330300}}
		+
		+	==About this Structure==
		+	[[3ztp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTP OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:017330300</ref><ref group="xtra">PMID:008263923</ref><references group="xtra"/>
		+	[[Category: Aquifex aeolicus]]
		+	[[Category: Nucleoside-diphosphate kinase]]
		+	[[Category: Boissier, F.]]
		+	[[Category: Dautant, A.]]
		+	[[Category: Dupuy, J W.]]
		+	[[Category: Georgescauld, F.]]
		+	[[Category: Giraud, M F.]]
		+	[[Category: Lascu, I.]]
		+	[[Category: Moynie, L.]]
		+	[[Category: Podar, M.]]
		+	[[Category: Sarger, C.]]
		+	[[Category: Transferase]]

OCA: Protected "3ztp" [edit=sysop:move=sysop]

OCA — Wed, 20 Jul 2011 06:21:43 GMT

Protected "3ztp" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:21, 20 July 2011