3zyb - Revision history

OCA at 11:15, 20 December 2023

OCA — Wed, 20 Dec 2023 11:15:55 GMT

←Older revision		Revision as of 11:15, 20 December 2023
Line 3:		Line 3:
	<StructureSection load='3zyb' size='340' side='right'caption='[[3zyb]], [[Resolution\|resolution]] 2.29Å' scene=''>		<StructureSection load='3zyb' size='340' side='right'caption='[[3zyb]], [[Resolution\|resolution]] 2.29Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3zyb]] is a 11 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Pseae Pseae~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZYB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3zyb]] is a 11 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZYB FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA~~-~~D-GALACTOSE'>GAL</scene>~~, ~~<scene name='pdbligand=PHB:P-HYDROXYBENZOIC+ACID'>PHB</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.29Å</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=~~NH2~~:~~AMINO~~+~~GROUP~~'>~~NH2~~</scene><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene>, <scene name='pdbligand=PHB:P-HYDROXYBENZOIC+ACID'>PHB</scene></td></tr>
-	~~<tr id~~='~~related'><td class~~=~~"sblockLbl"><b>[[Related_structure\|Related~~:~~]]</b~~></td><~~td class~~=~~"sblockDat"><div style~~=~~'overflow~~: ~~auto; max-height: 3em;~~'>~~[[2vxj\|2vxj]], [[1oko\|1oko]], [[1uoj\|1uoj]], [[2wyf\|2wyf]], [[1l7l\|1l7l]], [[3zyf\|3zyf]], [[3zyh\|3zyh]]~~</~~div~~><~~/td></tr>~~	+
-	~~<tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">lecA, pa1L, PA2570 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zyb OCA], [https://pdbe.org/3zyb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zyb RCSB], [https://www.ebi.ac.uk/pdbsum/3zyb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zyb ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zyb OCA], [https://pdbe.org/3zyb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zyb RCSB], [https://www.ebi.ac.uk/pdbsum/3zyb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zyb ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/PA1L_PSEAE PA1L_PSEAE]] D-galactose specific lectin. Binds in decreasing order of affinity: melibiose, methyl-alpha-D-galactoside, D-galactose, methyl-beta-D-galactoside, N-acetyl-D-galactosamine. Similar to plant lectins in its selective (carbohydrate-specific) hemagglutinating activity.	+	[https://www.uniprot.org/uniprot/PA1L_PSEAE PA1L_PSEAE] D-galactose specific lectin. Binds in decreasing order of affinity: melibiose, methyl-alpha-D-galactoside, D-galactose, methyl-beta-D-galactoside, N-acetyl-D-galactosamine. Similar to plant lectins in its selective (carbohydrate-specific) hemagglutinating activity.

	==See Also==		==See Also==
Line 18:		Line 16:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Pseae~~]]	+	[[Category: Pseudomonas aeruginosa PAO1]]
-	[[Category: Bergmann, M]]	+	[[Category: Synthetic construct]]
-	[[Category: Cacciarini, M]]	+	[[Category: Bergmann M]]
-	[[Category: Camara, M]]	+	[[Category: Cacciarini M]]
-	[[Category: Darbre, T]]	+	[[Category: Camara M]]
-	[[Category: Garg, D]]	+	[[Category: Darbre T]]
-	[[Category: Hurley, M]]	+	[[Category: Garg D]]
-	[[Category: Kadam~~, R U~~]]	+	[[Category: Hurley M]]
-	[[Category: Nativi, C]]	+	[[Category: Kadam RU]]
-	[[Category: Reymond, J L]]	+	[[Category: Nativi C]]
-	[[Category: Sattler, M]]	+	[[Category: Reymond J-L]]
-	[[Category: Smyth~~, A R~~]]	+	[[Category: Sattler M]]
-	[[Category: Stocker, A]]	+	[[Category: Smyth AR]]
-	[[Category: Swiderska~~, M A~~]]	+	[[Category: Stocker A]]
-	[[Category: Williams, P]]	+	[[Category: Swiderska MA]]
-	~~[[Category: Adhesin]]~~	+	[[Category: Williams P]]
-	~~[[Category: Galactose-specific]]~~	+
-	~~[[Category: Galactoside]]~~	+
-	~~[[Category: Glycosphingolipid-antigen]]~~	+
-	~~[[Category: Sugar binding protein~~]]	+

OCA at 07:27, 18 August 2022

OCA — Thu, 18 Aug 2022 07:27:28 GMT

←Older revision		Revision as of 07:27, 18 August 2022
Line 1:		Line 1:

	==CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH GALAG0 AT 2.3 A RESOLUTION==		==CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH GALAG0 AT 2.3 A RESOLUTION==
-	<StructureSection load='3zyb' size='340' side='right' caption='[[3zyb]], [[Resolution\|resolution]] 2.29Å' scene=''>	+	<StructureSection load='3zyb' size='340' side='right'caption='[[3zyb]], [[Resolution\|resolution]] 2.29Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3zyb]] is a 11 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3ZYB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3zyb]] is a 11 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZYB FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=PHB:P-HYDROXYBENZOIC+ACID'>PHB</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=PHB:P-HYDROXYBENZOIC+ACID'>PHB</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vxj\|2vxj]], [[1oko\|1oko]], [[1uoj\|1uoj]], [[2wyf\|2wyf]], [[1l7l\|1l7l]], [[3zyf\|3zyf]], [[3zyh\|3zyh]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2vxj\|2vxj]], [[1oko\|1oko]], [[1uoj\|1uoj]], [[2wyf\|2wyf]], [[1l7l\|1l7l]], [[3zyf\|3zyf]], [[3zyh\|3zyh]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lecA, pa1L, PA2570 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lecA, pa1L, PA2570 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3zyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zyb OCA], [~~http~~://pdbe.org/3zyb PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3zyb RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3zyb PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3zyb ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zyb OCA], [https://pdbe.org/3zyb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zyb RCSB], [https://www.ebi.ac.uk/pdbsum/3zyb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zyb ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/PA1L_PSEAE PA1L_PSEAE]] D-galactose specific lectin. Binds in decreasing order of affinity: melibiose, methyl-alpha-D-galactoside, D-galactose, methyl-beta-D-galactoside, N-acetyl-D-galactosamine. Similar to plant lectins in its selective (carbohydrate-specific) hemagglutinating activity.	+	[[https://www.uniprot.org/uniprot/PA1L_PSEAE PA1L_PSEAE]] D-galactose specific lectin. Binds in decreasing order of affinity: melibiose, methyl-alpha-D-galactoside, D-galactose, methyl-beta-D-galactoside, N-acetyl-D-galactosamine. Similar to plant lectins in its selective (carbohydrate-specific) hemagglutinating activity.

	==See Also==		==See Also==
Line 17:		Line 17:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Pseae]]		[[Category: Pseae]]
	[[Category: Bergmann, M]]		[[Category: Bergmann, M]]

OCA at 16:51, 27 February 2019

OCA — Wed, 27 Feb 2019 16:51:59 GMT

←Older revision		Revision as of 16:51, 27 February 2019
Line 3:		Line 3:
	<StructureSection load='3zyb' size='340' side='right' caption='[[3zyb]], [[Resolution\|resolution]] 2.29Å' scene=''>		<StructureSection load='3zyb' size='340' side='right' caption='[[3zyb]], [[Resolution\|resolution]] 2.29Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3zyb]] is a 16 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZYB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3zyb]] is a 11 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZYB FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=PHB:P-HYDROXYBENZOIC+ACID'>PHB</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=PHB:P-HYDROXYBENZOIC+ACID'>PHB</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vxj\|2vxj]], [[1oko\|1oko]], [[1uoj\|1uoj]], [[2wyf\|2wyf]], [[1l7l\|1l7l]], [[3zyf\|3zyf]], [[3zyh\|3zyh]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vxj\|2vxj]], [[1oko\|1oko]], [[1uoj\|1uoj]], [[2wyf\|2wyf]], [[1l7l\|1l7l]], [[3zyf\|3zyf]], [[3zyh\|3zyh]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lecA, pa1L, PA2570 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zyb OCA], [http://pdbe.org/3zyb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3zyb RCSB], [http://www.ebi.ac.uk/pdbsum/3zyb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3zyb ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zyb OCA], [http://pdbe.org/3zyb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3zyb RCSB], [http://www.ebi.ac.uk/pdbsum/3zyb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3zyb ProSAT]</span></td></tr>
	</table>		</table>
Line 16:		Line 17:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Pseae]]
	[[Category: Bergmann, M]]		[[Category: Bergmann, M]]
	[[Category: Cacciarini, M]]		[[Category: Cacciarini, M]]

OCA at 07:51, 9 March 2017

OCA — Thu, 09 Mar 2017 07:51:03 GMT

←Older revision		Revision as of 07:51, 9 March 2017
Line 3:		Line 3:
	<StructureSection load='3zyb' size='340' side='right' caption='[[3zyb]], [[Resolution\|resolution]] 2.29Å' scene=''>		<StructureSection load='3zyb' size='340' side='right' caption='[[3zyb]], [[Resolution\|resolution]] 2.29Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3zyb]] is a 16 chain structure ~~with sequence from [http://en.wikipedia.org/wiki/Pseae Pseae]~~. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZYB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3zyb]] is a 16 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZYB FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=PHB:P-HYDROXYBENZOIC+ACID'>PHB</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=PHB:P-HYDROXYBENZOIC+ACID'>PHB</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
Line 16:		Line 16:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Pseae]]
	[[Category: Bergmann, M]]		[[Category: Bergmann, M]]
	[[Category: Cacciarini, M]]		[[Category: Cacciarini, M]]

OCA at 04:47, 5 August 2016

OCA — Fri, 05 Aug 2016 04:47:15 GMT

←Older revision		Revision as of 04:47, 5 August 2016
Line 1:		Line 1:
		+
	==CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH GALAG0 AT 2.3 A RESOLUTION==		==CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH GALAG0 AT 2.3 A RESOLUTION==
	<StructureSection load='3zyb' size='340' side='right' caption='[[3zyb]], [[Resolution\|resolution]] 2.29Å' scene=''>		<StructureSection load='3zyb' size='340' side='right' caption='[[3zyb]], [[Resolution\|resolution]] 2.29Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3zyb]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Pseudomonas_aeruginosa Pseudomonas aeruginosa~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZYB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3zyb]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZYB FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=PHB:P-HYDROXYBENZOIC+ACID'>PHB</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=PHB:P-HYDROXYBENZOIC+ACID'>PHB</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vxj\|2vxj]], [[1oko\|1oko]], [[1uoj\|1uoj]], [[2wyf\|2wyf]], [[1l7l\|1l7l]], [[3zyf\|3zyf]], [[3zyh\|3zyh]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vxj\|2vxj]], [[1oko\|1oko]], [[1uoj\|1uoj]], [[2wyf\|2wyf]], [[1l7l\|1l7l]], [[3zyf\|3zyf]], [[3zyh\|3zyh]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zyb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3zyb RCSB], [http://www.ebi.ac.uk/pdbsum/3zyb PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zyb OCA], [http://pdbe.org/3zyb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3zyb RCSB], [http://www.ebi.ac.uk/pdbsum/3zyb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3zyb ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 15:		Line 16:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Pseudomonas aeruginosa~~]]	+	[[Category: Pseae]]
	[[Category: Bergmann, M]]		[[Category: Bergmann, M]]
	[[Category: Cacciarini, M]]		[[Category: Cacciarini, M]]

OCA at 15:53, 25 December 2014

OCA — Thu, 25 Dec 2014 15:53:47 GMT

←Older revision		Revision as of 15:53, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3zyb]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZYB FirstGlance]. <br>		<table><tr><td colspan='2'>[[3zyb]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZYB FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=PHB:P-HYDROXYBENZOIC+ACID'>PHB</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=PHB:P-HYDROXYBENZOIC+ACID'>PHB</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vxj\|2vxj]], [[1oko\|1oko]], [[1uoj\|1uoj]], [[2wyf\|2wyf]], [[1l7l\|1l7l]], [[3zyf\|3zyf]], [[3zyh\|3zyh]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vxj\|2vxj]], [[1oko\|1oko]], [[1uoj\|1uoj]], [[2wyf\|2wyf]], [[1l7l\|1l7l]], [[3zyf\|3zyf]], [[3zyh\|3zyh]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zyb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3zyb RCSB], [http://www.ebi.ac.uk/pdbsum/3zyb PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zyb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3zyb RCSB], [http://www.ebi.ac.uk/pdbsum/3zyb PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/PA1L_PSEAE PA1L_PSEAE]] D-galactose specific lectin. Binds in decreasing order of affinity: melibiose, methyl-alpha-D-galactoside, D-galactose, methyl-beta-D-galactoside, N-acetyl-D-galactosamine. Similar to plant lectins in its selective (carbohydrate-specific) hemagglutinating activity.

	==See Also==		==See Also==
Line 14:		Line 16:
	</StructureSection>		</StructureSection>
	[[Category: Pseudomonas aeruginosa]]		[[Category: Pseudomonas aeruginosa]]
-	[[Category: Bergmann, M.]]	+	[[Category: Bergmann, M]]
-	[[Category: Cacciarini, M.]]	+	[[Category: Cacciarini, M]]
-	[[Category: Camara, M.]]	+	[[Category: Camara, M]]
-	[[Category: Darbre, T.]]	+	[[Category: Darbre, T]]
-	[[Category: Garg, D.]]	+	[[Category: Garg, D]]
-	[[Category: Hurley, M.]]	+	[[Category: Hurley, M]]
-	[[Category: Kadam, R U.]]	+	[[Category: Kadam, R U]]
-	[[Category: Nativi, C.]]	+	[[Category: Nativi, C]]
-	[[Category: Reymond, J L.]]	+	[[Category: Reymond, J L]]
-	[[Category: Sattler, M.]]	+	[[Category: Sattler, M]]
-	[[Category: Smyth, A R.]]	+	[[Category: Smyth, A R]]
-	[[Category: Stocker, A.]]	+	[[Category: Stocker, A]]
-	[[Category: Swiderska, M A.]]	+	[[Category: Swiderska, M A]]
-	[[Category: Williams, P.]]	+	[[Category: Williams, P]]
	[[Category: Adhesin]]		[[Category: Adhesin]]
	[[Category: Galactose-specific]]		[[Category: Galactose-specific]]

OCA at 08:07, 5 June 2014

OCA — Thu, 05 Jun 2014 08:07:25 GMT

←Older revision		Revision as of 08:07, 5 June 2014
Line 1:		Line 1:
-	[[~~Image:~~3zyb.~~png~~\|~~left~~\|~~200px~~]]	+	==CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH GALAG0 AT 2.3 A RESOLUTION==
		+	<StructureSection load='3zyb' size='340' side='right' caption='[[3zyb]], [[Resolution\|resolution]] 2.29Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3zyb]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZYB FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=PHB:P-HYDROXYBENZOIC+ACID'>PHB</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vxj\|2vxj]], [[1oko\|1oko]], [[1uoj\|1uoj]], [[2wyf\|2wyf]], [[1l7l\|1l7l]], [[3zyf\|3zyf]], [[3zyh\|3zyh]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zyb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3zyb RCSB], [http://www.ebi.ac.uk/pdbsum/3zyb PDBsum]</span></td></tr>
		+	<table>

-	~~<!--~~	+	==See Also==
-	~~The line below this paragraph, containing "STRUCTURE_3zyb", creates the "Structure Box" on the page.~~	+	*[[Galactose-binding lectin\|Galactose-binding lectin]]
-	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~	+	__TOC__
-	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~	+	</StructureSection>
-	~~or leave the SCENE parameter empty for the default display.~~	+
-	~~-->~~	+
-	~~{{STRUCTURE_3zyb\| PDB~~=~~3zyb \| SCENE~~= }}	+
-		+
-	~~===CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH GALAG0 AT 2.3 A RESOLUTION===~~	+
-		+
-		+
-	~~==About this Structure~~==	+
-	[[~~3zyb~~]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA].	+
-		+
-	~~==Reference==~~	+
-	<~~ref group="xtra">PMID:021919164</ref><references group="xtra"~~/>	+
	[[Category: Pseudomonas aeruginosa]]		[[Category: Pseudomonas aeruginosa]]
	[[Category: Bergmann, M.]]		[[Category: Bergmann, M.]]

OCA at 08:17, 25 April 2012

OCA — Wed, 25 Apr 2012 08:17:57 GMT

←Older revision		Revision as of 08:17, 25 April 2012
Line 14:		Line 14:
	==About this Structure==		==About this Structure==
	[[3zyb]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA].		[[3zyb]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:021919164</ref><references group="xtra"/>
	[[Category: Pseudomonas aeruginosa]]		[[Category: Pseudomonas aeruginosa]]
	[[Category: Bergmann, M.]]		[[Category: Bergmann, M.]]

OCA at 04:56, 28 September 2011

OCA — Wed, 28 Sep 2011 04:56:26 GMT

←Older revision		Revision as of 04:56, 28 September 2011
Line 1:		Line 1:
-	[[Image:3zyb.~~jpg~~\|left\|200px]]	+	[[Image:3zyb.png\|left\|200px]]

	<!--		<!--

OCA at 06:19, 21 September 2011

OCA — Wed, 21 Sep 2011 06:19:29 GMT

←Older revision		Revision as of 06:19, 21 September 2011
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3zyb.jpg\|left\|200px]]

-	The ~~entry 3zyb~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3zyb", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3zyb\| PDB=3zyb \| SCENE= }}

-	~~Authors: Kadam, R.U., Bergmann, M., Hurley, M., Garg, D., Cacciarini, M., Swiderska, M~~.A~~., Nativi, C., Sattler, M., Smyth, A.R., Williams, P., Camara, M., Stocker, A., Darbre, T., Reymond, J.-L.~~	+	===CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH GALAG0 AT 2.3 A RESOLUTION===

-	~~Description~~: ~~CRYSTAL STRUCTURE OF PA~~-~~IL LECTIN COMPLEXED WITH GALAG0 AT 2~~.3 A ~~RESOLUTION~~	+
		+	==About this Structure==
		+	[[3zyb]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA].
		+	[[Category: Pseudomonas aeruginosa]]
		+	[[Category: Bergmann, M.]]
		+	[[Category: Cacciarini, M.]]
		+	[[Category: Camara, M.]]
		+	[[Category: Darbre, T.]]
		+	[[Category: Garg, D.]]
		+	[[Category: Hurley, M.]]
		+	[[Category: Kadam, R U.]]
		+	[[Category: Nativi, C.]]
		+	[[Category: Reymond, J L.]]
		+	[[Category: Sattler, M.]]
		+	[[Category: Smyth, A R.]]
		+	[[Category: Stocker, A.]]
		+	[[Category: Swiderska, M A.]]
		+	[[Category: Williams, P.]]
		+	[[Category: Adhesin]]
		+	[[Category: Galactose-specific]]
		+	[[Category: Galactoside]]
		+	[[Category: Glycosphingolipid-antigen]]
		+	[[Category: Sugar binding protein]]