4ak2 - Revision history

OCA at 10:51, 9 May 2024

OCA — Thu, 09 May 2024 10:51:16 GMT

←Older revision		Revision as of 10:51, 9 May 2024
Line 3:		Line 3:
	<StructureSection load='4ak2' size='340' side='right'caption='[[4ak2]], [[Resolution\|resolution]] 1.35Å' scene=''>		<StructureSection load='4ak2' size='340' side='right'caption='[[4ak2]], [[Resolution\|resolution]] 1.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4ak2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Bactn Bactn~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AK2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AK2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4ak2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_VPI-5482 Bacteroides thetaiotaomicron VPI-5482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AK2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AK2 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~"><~~scene name~~='~~pdbligand~~=NA:~~SODIUM+ION'~~>NA</~~scene~~>, <scene name='pdbligand=IDS:2-O-SULFO-ALPHA-L-IDOPYRANURONIC+ACID'>IDS</scene>, <scene name='pdbligand=~~SGN~~:~~N,O6-DISULFO-GLUCOSAMINE~~'>~~SGN~~</scene><~~/td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.35Å</td></tr>
-	~~<tr id~~='~~related'><td class~~=~~"sblockLbl"><b>[[Related_structure\|Related~~:~~]]</b></td><td class="sblockDat"><div style='overflow: auto; max~~-~~height: 3em;~~'>~~[[4ak1\|4ak1]]~~</~~div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IDS:2-O-SULFO-ALPHA-L-IDOPYRANURONIC+ACID'>IDS</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SGN:N,O6-DISULFO-GLUCOSAMINE'>SGN</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ak2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ak2 OCA], [https://pdbe.org/4ak2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ak2 RCSB], [https://www.ebi.ac.uk/pdbsum/4ak2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ak2 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ak2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ak2 OCA], [https://pdbe.org/4ak2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ak2 RCSB], [https://www.ebi.ac.uk/pdbsum/4ak2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ak2 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q89YS0_BACTN Q89YS0_BACTN]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 21:		Line 23:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bactn~~]]	+	[[Category: Bacteroides thetaiotaomicron VPI-5482]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Basle, A]]	+	[[Category: Basle A]]
-	[[Category: Bolam~~, D N~~]]	+	[[Category: Bolam DN]]
-	[[Category: Czjzek, M]]	+	[[Category: Czjzek M]]
-	[[Category: Firbank~~, S J~~]]	+	[[Category: Firbank SJ]]
-	[[Category: Lowe~~, E C~~]]	+	[[Category: Lowe EC]]
-	[[Category: Murray, H]]	+	[[Category: Murray H]]
-	[[Category: Thomas, S]]	+	[[Category: Thomas S]]
-	~~[[Category: Heparan sulphate]]~~	+
-	~~[[Category: Heparin-binding protein~~]]	+

OCA at 05:36, 25 August 2022

OCA — Thu, 25 Aug 2022 05:36:44 GMT

←Older revision		Revision as of 05:36, 25 August 2022
Line 3:		Line 3:
	<StructureSection load='4ak2' size='340' side='right'caption='[[4ak2]], [[Resolution\|resolution]] 1.35Å' scene=''>		<StructureSection load='4ak2' size='340' side='right'caption='[[4ak2]], [[Resolution\|resolution]] 1.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4ak2]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Bactn Bactn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AK2 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=4AK2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4ak2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bactn Bactn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AK2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AK2 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=IDS:2-O-SULFO-ALPHA-L-IDOPYRANURONIC+ACID'>IDS</scene>, <scene name='pdbligand=SGN:N,O6-DISULFO-GLUCOSAMINE'>SGN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=IDS:2-O-SULFO-ALPHA-L-IDOPYRANURONIC+ACID'>IDS</scene>, <scene name='pdbligand=SGN:N,O6-DISULFO-GLUCOSAMINE'>SGN</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4ak1\|4ak1]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[4ak1\|4ak1]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=4ak2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ak2 OCA], [~~http~~://pdbe.org/4ak2 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4ak2 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4ak2 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4ak2 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ak2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ak2 OCA], [https://pdbe.org/4ak2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ak2 RCSB], [https://www.ebi.ac.uk/pdbsum/4ak2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ak2 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 10:54, 16 September 2020

OCA — Wed, 16 Sep 2020 10:54:12 GMT

←Older revision		Revision as of 10:54, 16 September 2020
Line 1:		Line 1:

	==Structure of BT4661, a SusE-like surface located polysaccharide binding protein from the Bacteroides thetaiotaomicron heparin utilisation locus==		==Structure of BT4661, a SusE-like surface located polysaccharide binding protein from the Bacteroides thetaiotaomicron heparin utilisation locus==
-	<StructureSection load='4ak2' size='340' side='right' caption='[[4ak2]], [[Resolution\|resolution]] 1.35Å' scene=''>	+	<StructureSection load='4ak2' size='340' side='right'caption='[[4ak2]], [[Resolution\|resolution]] 1.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4ak2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bactn Bactn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AK2 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4AK2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4ak2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bactn Bactn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AK2 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=4AK2 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=~~IDS~~:~~2-O-SULFO-ALPHA-L-IDOPYRANURONIC~~+~~ACID~~'>~~IDS~~</scene>, <scene name='pdbligand=NA:~~SODIUM~~+~~ION~~'>NA</scene>, <scene name='pdbligand=SGN:N,O6-DISULFO-GLUCOSAMINE'>SGN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=IDS:2-O-SULFO-ALPHA-L-IDOPYRANURONIC+ACID'>IDS</scene>, <scene name='pdbligand=SGN:N,O6-DISULFO-GLUCOSAMINE'>SGN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4ak1\|4ak1]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4ak1\|4ak1]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4ak2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ak2 OCA], [http://pdbe.org/4ak2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ak2 RCSB], [http://www.ebi.ac.uk/pdbsum/4ak2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ak2 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=4ak2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ak2 OCA], [http://pdbe.org/4ak2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ak2 RCSB], [http://www.ebi.ac.uk/pdbsum/4ak2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ak2 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 22:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Bactn]]		[[Category: Bactn]]
		+	[[Category: Large Structures]]
	[[Category: Basle, A]]		[[Category: Basle, A]]
	[[Category: Bolam, D N]]		[[Category: Bolam, D N]]

OCA at 07:02, 12 December 2018

OCA — Wed, 12 Dec 2018 07:02:43 GMT

←Older revision		Revision as of 07:02, 12 December 2018
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4ak2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bactn Bactn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AK2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4AK2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[4ak2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bactn Bactn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AK2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4AK2 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:~~SODIUM~~+~~ION~~'>NA</scene>, <scene name='pdbligand=~~IDS~~:~~2-O-SULFO-ALPHA-L-IDOPYRANURONIC~~+~~ACID~~'>~~IDS~~</scene>, <scene name='pdbligand=SGN:N,O6-DISULFO-GLUCOSAMINE'>SGN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=IDS:2-O-SULFO-ALPHA-L-IDOPYRANURONIC+ACID'>IDS</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SGN:N,O6-DISULFO-GLUCOSAMINE'>SGN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4ak1\|4ak1]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4ak1\|4ak1]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ak2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ak2 OCA], [http://pdbe.org/4ak2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ak2 RCSB], [http://www.ebi.ac.uk/pdbsum/4ak2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ak2 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ak2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ak2 OCA], [http://pdbe.org/4ak2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ak2 RCSB], [http://www.ebi.ac.uk/pdbsum/4ak2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ak2 ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The human microbiota, which plays an important role in health and disease, uses complex carbohydrates as a major source of nutrients. Utilization hierarchy indicates that the host glycosaminoglycans heparin (Hep) and heparan sulfate (HS) are high-priority carbohydrates for Bacteroides thetaiotaomicron, a prominent member of the human microbiota. The sulfation patterns of these glycosaminoglycans are highly variable, which presents a significant enzymatic challenge to the polysaccharide lyases and sulfatases that mediate degradation. It is possible that the bacterium recruits lyases with highly plastic specificities and expresses a repertoire of enzymes that target substructures of the glycosaminoglycans with variable sulfation or that the glycans are desulfated before cleavage by the lyases. To distinguish between these mechanisms, the components of the B. thetaiotaomicron Hep/HS degrading apparatus were analyzed. The data showed that the bacterium expressed a single-surface endo-acting lyase that cleaved HS, reflecting its higher molecular weight compared with Hep. Both Hep and HS oligosaccharides imported into the periplasm were degraded by a repertoire of lyases, with each enzyme displaying specificity for substructures within these glycosaminoglycans that display a different degree of sulfation. Furthermore, the crystal structures of a key surface glycan binding protein, which is able to bind both Hep and HS, and periplasmic sulfatases reveal the major specificity determinants for these proteins. The locus described here is highly conserved within the human gut Bacteroides, indicating that the model developed is of generic relevance to this important microbial community.
		+
		+	How members of the human gut microbiota overcome the sulfation problem posed by glycosaminoglycans.,Cartmell A, Lowe EC, Basle A, Firbank SJ, Ndeh DA, Murray H, Terrapon N, Lombard V, Henrissat B, Turnbull JE, Czjzek M, Gilbert HJ, Bolam DN Proc Natl Acad Sci U S A. 2017 Jul 3;114(27):7037-7042. doi:, 10.1073/pnas.1704367114. Epub 2017 Jun 19. PMID:28630303<ref>PMID:28630303</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 4ak2" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 17:17, 11 August 2016

OCA — Thu, 11 Aug 2016 17:17:13 GMT

←Older revision		Revision as of 17:17, 11 August 2016
Line 1:		Line 1:
		+
	==Structure of BT4661, a SusE-like surface located polysaccharide binding protein from the Bacteroides thetaiotaomicron heparin utilisation locus==		==Structure of BT4661, a SusE-like surface located polysaccharide binding protein from the Bacteroides thetaiotaomicron heparin utilisation locus==
	<StructureSection load='4ak2' size='340' side='right' caption='[[4ak2]], [[Resolution\|resolution]] 1.35Å' scene=''>		<StructureSection load='4ak2' size='340' side='right' caption='[[4ak2]], [[Resolution\|resolution]] 1.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4ak2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacteroides_thetaiotaomicron_vpi-5482 Bacteroides thetaiotaomicron vpi-5482~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AK2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4AK2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4ak2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bactn Bactn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AK2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4AK2 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=IDS:2-O-SULFO-ALPHA-L-IDOPYRANURONIC+ACID'>IDS</scene>, <scene name='pdbligand=SGN:N,O6-DISULFO-GLUCOSAMINE'>SGN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=IDS:2-O-SULFO-ALPHA-L-IDOPYRANURONIC+ACID'>IDS</scene>, <scene name='pdbligand=SGN:N,O6-DISULFO-GLUCOSAMINE'>SGN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4ak1\|4ak1]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4ak1\|4ak1]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ak2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ak2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ak2 RCSB], [http://www.ebi.ac.uk/pdbsum/4ak2 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ak2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ak2 OCA], [http://pdbe.org/4ak2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ak2 RCSB], [http://www.ebi.ac.uk/pdbsum/4ak2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ak2 ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacteroides thetaiotaomicron vpi-5482~~]]	+	[[Category: Bactn]]
	[[Category: Basle, A]]		[[Category: Basle, A]]
	[[Category: Bolam, D N]]		[[Category: Bolam, D N]]

OCA at 10:48, 4 January 2015

OCA — Sun, 04 Jan 2015 10:48:00 GMT

←Older revision		Revision as of 10:48, 4 January 2015
Line 1:		Line 1:
-	~~[[Image:4ak2.jpg\|left\|200px]]~~	+	==Structure of BT4661, a SusE-like surface located polysaccharide binding protein from the Bacteroides thetaiotaomicron heparin utilisation locus==
-		+	<StructureSection load='4ak2' size='340' side='right' caption='[[4ak2]], [[Resolution\|resolution]] 1.35Å' scene=''>
-	~~{{STRUCTURE_4ak2\| PDB=4ak2 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4ak2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_vpi-5482 Bacteroides thetaiotaomicron vpi-5482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AK2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4AK2 FirstGlance]. <br>
-	===Structure of BT4661, a SusE-like surface located polysaccharide binding protein from the Bacteroides thetaiotaomicron heparin utilisation locus===	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=IDS:2-O-SULFO-ALPHA-L-IDOPYRANURONIC+ACID'>IDS</scene>, <scene name='pdbligand=SGN:N,O6-DISULFO-GLUCOSAMINE'>SGN</scene></td></tr>
-		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4ak1\|4ak1]]</td></tr>
-		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ak2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ak2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ak2 RCSB], [http://www.ebi.ac.uk/pdbsum/4ak2 PDBsum]</span></td></tr>
-	==~~About this Structure~~==	+	</table>
-	[[4ak2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_vpi-5482 Bacteroides thetaiotaomicron vpi-5482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AK2 OCA].	+	__TOC__
		+	</StructureSection>
	[[Category: Bacteroides thetaiotaomicron vpi-5482]]		[[Category: Bacteroides thetaiotaomicron vpi-5482]]
-	[[Category: Basle, A.]]	+	[[Category: Basle, A]]
-	[[Category: Bolam, D N.]]	+	[[Category: Bolam, D N]]
-	[[Category: Czjzek, M.]]	+	[[Category: Czjzek, M]]
-	[[Category: Firbank, S J.]]	+	[[Category: Firbank, S J]]
-	[[Category: Lowe, E C.]]	+	[[Category: Lowe, E C]]
-	[[Category: Murray, H.]]	+	[[Category: Murray, H]]
-	[[Category: Thomas, S.]]	+	[[Category: Thomas, S]]
	[[Category: Heparan sulphate]]		[[Category: Heparan sulphate]]
	[[Category: Heparin-binding protein]]		[[Category: Heparin-binding protein]]

OCA at 14:22, 6 March 2013

OCA — Wed, 06 Mar 2013 14:22:41 GMT

←Older revision		Revision as of 14:22, 6 March 2013
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:4ak2.jpg\|left\|200px]]

-	~~The entry~~ 4ak2 ~~is ON HOLD~~ ~~until Paper Publication~~	+	{{STRUCTURE_4ak2\| PDB=4ak2 \| SCENE= }}

-	~~Authors: Lowe~~, ~~E.C., Basle, A., Czjzek, M., Thomas, S., Murray, H., Firbank, S.J., Bolam, D.N.~~	+	===Structure of BT4661, a SusE-like surface located polysaccharide binding protein from the Bacteroides thetaiotaomicron heparin utilisation locus===

-	~~Description:~~ Structure ~~of BT4661,~~ a ~~SusE~~-~~like surface located polysaccharide binding protein~~ from ~~the~~ Bacteroides thetaiotaomicron ~~heparin utilisation locus~~	+
		+	==About this Structure==
		+	[[4ak2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_vpi-5482 Bacteroides thetaiotaomicron vpi-5482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AK2 OCA].
		+	[[Category: Bacteroides thetaiotaomicron vpi-5482]]
		+	[[Category: Basle, A.]]
		+	[[Category: Bolam, D N.]]
		+	[[Category: Czjzek, M.]]
		+	[[Category: Firbank, S J.]]
		+	[[Category: Lowe, E C.]]
		+	[[Category: Murray, H.]]
		+	[[Category: Thomas, S.]]
		+	[[Category: Heparan sulphate]]
		+	[[Category: Heparin-binding protein]]

OCA: Protected "4ak2" [edit=sysop:move=sysop]

OCA — Wed, 29 Feb 2012 08:20:28 GMT

Protected "4ak2" [edit=sysop:move=sysop]

←Older revision

Revision as of 08:20, 29 February 2012

OCA: New page: '''Unreleased structure''' The entry 4ak2 is ON HOLD until Paper Publication Authors: Lowe, E.C., Basle, A., Czjzek, M., Thomas, S., Murray, H., Firbank, S.J., Bolam, D.N. Description:...

OCA — Wed, 29 Feb 2012 08:20:27 GMT

New page: '''Unreleased structure''' The entry 4ak2 is ON HOLD until Paper Publication Authors: Lowe, E.C., Basle, A., Czjzek, M., Thomas, S., Murray, H., Firbank, S.J., Bolam, D.N. Description:...

New page

'''Unreleased structure'''

The entry 4ak2 is ON HOLD until Paper Publication

Authors: Lowe, E.C., Basle, A., Czjzek, M., Thomas, S., Murray, H., Firbank, S.J., Bolam, D.N.

Description: Structure of BT4661, a SusE-like surface located polysaccharide binding protein from the Bacteroides thetaiotaomicron heparin utilisation locus