4ba1 - Revision history

OCA at 11:46, 20 December 2023

OCA — Wed, 20 Dec 2023 11:46:37 GMT

←Older revision		Revision as of 11:46, 20 December 2023
Line 3:		Line 3:
	<StructureSection load='4ba1' size='340' side='right'caption='[[4ba1]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='4ba1' size='340' side='right'caption='[[4ba1]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4ba1]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Atcc_35091 Atcc 35091~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BA1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BA1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4ba1]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus Saccharolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BA1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BA1 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene~~></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.8Å</td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2br2\|2br2]], [[2c37\|2c37]], [[2c38\|2c38]], [[2c39\|2c39]], [[2je6\|2je6]], [[2jea\|2jea]], [[2jeb\|2jeb]], [[4ba2\|4ba2]]</div></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ba1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ba1 OCA], [https://pdbe.org/4ba1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ba1 RCSB], [https://www.ebi.ac.uk/pdbsum/4ba1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ba1 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ba1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ba1 OCA], [https://pdbe.org/4ba1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ba1 RCSB], [https://www.ebi.ac.uk/pdbsum/4ba1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ba1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/~~ECX2_SULSO ECX2_SULSO~~]~~] Probably~~ involved in ~~the~~ 3'->5' ~~degradation of a variety of RNA species (Potential)~~. ~~[[https://www.uniprot.org/uniprot/ECR1_SULSO ECR1_SULSO]] Probably involved in degradation of a variety of RNA species; could act a~~ RNA-~~binding component of the exosome (Potential)~~. [~~[https~~://~~www.uniprot.org~~/~~uniprot/ECX1_SULSO ECX1_SULSO]] Probably involved in the 3'-~~>~~5' degradation of a variety of RNA species (Potential).~~	+	[https://www.uniprot.org/uniprot/RRP41_SACS2 RRP41_SACS2] Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteromeric RNA-tails. Binds RNA.[HAMAP-Rule:MF_00591]<ref>PMID:15951817</ref> <ref>PMID:17380186</ref> <ref>PMID:20488184</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 23:		Line 23:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Atcc 35091]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Conti, E~~]]	+	[[Category: Saccharolobus solfataricus]]
-	[[Category: ~~Lorentzen,~~ E]]	+	[[Category: Conti E]]
-	[[Category: ~~Hydrolase]]~~	+	[[Category: Lorentzen E]]
-	~~[[Category: Rna degradation~~]]	+

OCA at 07:05, 31 August 2022

OCA — Wed, 31 Aug 2022 07:05:21 GMT

←Older revision		Revision as of 07:05, 31 August 2022
Line 3:		Line 3:
	<StructureSection load='4ba1' size='340' side='right'caption='[[4ba1]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='4ba1' size='340' side='right'caption='[[4ba1]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4ba1]] is a 3 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Atcc_35091 Atcc 35091]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BA1 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4BA1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4ba1]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_35091 Atcc 35091]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BA1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BA1 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2br2\|2br2]], [[2c37\|2c37]], [[2c38\|2c38]], [[2c39\|2c39]], [[2je6\|2je6]], [[2jea\|2jea]], [[2jeb\|2jeb]], [[4ba2\|4ba2]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2br2\|2br2]], [[2c37\|2c37]], [[2c38\|2c38]], [[2c39\|2c39]], [[2je6\|2je6]], [[2jea\|2jea]], [[2jeb\|2jeb]], [[4ba2\|4ba2]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4ba1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ba1 OCA], [~~http~~://pdbe.org/4ba1 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4ba1 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4ba1 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4ba1 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ba1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ba1 OCA], [https://pdbe.org/4ba1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ba1 RCSB], [https://www.ebi.ac.uk/pdbsum/4ba1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ba1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/ECX2_SULSO ECX2_SULSO]] Probably involved in the 3'->5' degradation of a variety of RNA species (Potential). [[~~http~~://www.uniprot.org/uniprot/ECR1_SULSO ECR1_SULSO]] Probably involved in degradation of a variety of RNA species; could act a RNA-binding component of the exosome (Potential). [[~~http~~://www.uniprot.org/uniprot/ECX1_SULSO ECX1_SULSO]] Probably involved in the 3'->5' degradation of a variety of RNA species (Potential).	+	[[https://www.uniprot.org/uniprot/ECX2_SULSO ECX2_SULSO]] Probably involved in the 3'->5' degradation of a variety of RNA species (Potential). [[https://www.uniprot.org/uniprot/ECR1_SULSO ECR1_SULSO]] Probably involved in degradation of a variety of RNA species; could act a RNA-binding component of the exosome (Potential). [[https://www.uniprot.org/uniprot/ECX1_SULSO ECX1_SULSO]] Probably involved in the 3'->5' degradation of a variety of RNA species (Potential).
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 13:26, 13 March 2019

OCA — Wed, 13 Mar 2019 13:26:51 GMT

←Older revision		Revision as of 13:26, 13 March 2019
Line 1:		Line 1:

	==Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate==		==Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate==
-	<StructureSection load='4ba1' size='340' side='right' caption='[[4ba1]], [[Resolution\|resolution]] 1.80Å' scene=''>	+	<StructureSection load='4ba1' size='340' side='right'caption='[[4ba1]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4ba1]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_35091 Atcc 35091]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BA1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4BA1 FirstGlance]. <br>		<table><tr><td colspan='2'>[[4ba1]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_35091 Atcc 35091]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BA1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4BA1 FirstGlance]. <br>
Line 24:		Line 24:
	</StructureSection>		</StructureSection>
	[[Category: Atcc 35091]]		[[Category: Atcc 35091]]
		+	[[Category: Large Structures]]
	[[Category: Conti, E]]		[[Category: Conti, E]]
	[[Category: Lorentzen, E]]		[[Category: Lorentzen, E]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Rna degradation]]		[[Category: Rna degradation]]

OCA at 11:26, 4 August 2016

OCA — Thu, 04 Aug 2016 11:26:23 GMT

←Older revision		Revision as of 11:26, 4 August 2016
Line 1:		Line 1:
		+
	==Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate==		==Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate==
	<StructureSection load='4ba1' size='340' side='right' caption='[[4ba1]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='4ba1' size='340' side='right' caption='[[4ba1]], [[Resolution\|resolution]] 1.80Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2br2\|2br2]], [[2c37\|2c37]], [[2c38\|2c38]], [[2c39\|2c39]], [[2je6\|2je6]], [[2jea\|2jea]], [[2jeb\|2jeb]], [[4ba2\|4ba2]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2br2\|2br2]], [[2c37\|2c37]], [[2c38\|2c38]], [[2c39\|2c39]], [[2je6\|2je6]], [[2jea\|2jea]], [[2jeb\|2jeb]], [[4ba2\|4ba2]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ba1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ba1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ba1 RCSB], [http://www.ebi.ac.uk/pdbsum/4ba1 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ba1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ba1 OCA], [http://pdbe.org/4ba1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ba1 RCSB], [http://www.ebi.ac.uk/pdbsum/4ba1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ba1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 18:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 4ba1" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 13:52, 24 December 2014

OCA — Wed, 24 Dec 2014 13:52:35 GMT

←Older revision		Revision as of 13:52, 24 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_4ba1\| PDB=4ba1 \| SCENE= }}~~	+	==Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate==
-	===Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate===	+	<StructureSection load='4ba1' size='340' side='right' caption='[[4ba1]], [[Resolution\|resolution]] 1.80Å' scene=''>
-	~~{{ABSTRACT_PUBMED_23319881}}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4ba1]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_35091 Atcc 35091]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BA1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4BA1 FirstGlance]. <br>
-	==Function==	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2br2\|2br2]], [[2c37\|2c37]], [[2c38\|2c38]], [[2c39\|2c39]], [[2je6\|2je6]], [[2jea\|2jea]], [[2jeb\|2jeb]], [[4ba2\|4ba2]]</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ba1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ba1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ba1 RCSB], [http://www.ebi.ac.uk/pdbsum/4ba1 PDBsum]</span></td></tr>
		+	</table>
		+	== Function ==
	[[http://www.uniprot.org/uniprot/ECX2_SULSO ECX2_SULSO]] Probably involved in the 3'->5' degradation of a variety of RNA species (Potential). [[http://www.uniprot.org/uniprot/ECR1_SULSO ECR1_SULSO]] Probably involved in degradation of a variety of RNA species; could act a RNA-binding component of the exosome (Potential). [[http://www.uniprot.org/uniprot/ECX1_SULSO ECX1_SULSO]] Probably involved in the 3'->5' degradation of a variety of RNA species (Potential).		[[http://www.uniprot.org/uniprot/ECX2_SULSO ECX2_SULSO]] Probably involved in the 3'->5' degradation of a variety of RNA species (Potential). [[http://www.uniprot.org/uniprot/ECR1_SULSO ECR1_SULSO]] Probably involved in degradation of a variety of RNA species; could act a RNA-binding component of the exosome (Potential). [[http://www.uniprot.org/uniprot/ECX1_SULSO ECX1_SULSO]] Probably involved in the 3'->5' degradation of a variety of RNA species (Potential).
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The RNA exosome is an important protein complex that functions in the 3' processing and degradation of RNA in archaeal and eukaryotic organisms. The archaeal exosome is functionally similar to bacterial polynucleotide phosphorylase (PNPase) and RNase PH enzymes as it uses inorganic phosphate (Pi) to processively cleave RNA substrates releasing nucleoside diphosphates. To shed light on the mechanism of catalysis, we have determined the crystal structures of mutant archaeal exosome in complex with either Pi or with both RNA and Pi at resolutions of 1.8 A and 2.5 A, respectively. These structures represent views of precatalytic states of the enzyme and allow the accurate determination of the substrate binding geometries. In the structure with both Pi and RNA bound, the Pi closely approaches the phosphate of the 3'-end nucleotide of the RNA and is in a perfect position to perform a nucleophilic attack. The presence of negative charge resulting from the close contacts between the phosphates appears to be neutralized by conserved positively charged residues in the active site of the archaeal exosome. The high degree of structural conservation between the archaeal exosome and the PNPase including the requirement for divalent metal ions for catalysis is discussed.

-	~~==About this Structure==~~	+	Crystal structure of a 9-subunit archaeal exosome in pre-catalytic States of the phosphorolytic reaction.,Lorentzen E, Conti E Archaea. 2012;2012:721869. doi: 10.1155/2012/721869. Epub 2012 Dec 20. PMID:23319881<ref>PMID:23319881</ref>
-	~~[[4ba1]] is~~ a ~~3 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Atcc_35091 Atcc 35091]~~. ~~Full crystallographic information is available from [http~~://~~oca~~.~~weizmann~~.~~ac.il~~/~~oca-bin/ocashort?id=4BA1 OCA].~~	+

-	==~~Reference~~==	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~<ref group="xtra">PMID:023319881</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	</div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Atcc 35091]]		[[Category: Atcc 35091]]
-	[[Category: Conti, E.]]	+	[[Category: Conti, E]]
-	[[Category: Lorentzen, E.]]	+	[[Category: Lorentzen, E]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Rna degradation]]		[[Category: Rna degradation]]

OCA at 07:17, 15 January 2014

OCA — Wed, 15 Jan 2014 07:17:12 GMT

←Older revision		Revision as of 07:17, 15 January 2014
Line 1:		Line 1:
-	[[Image:4ba1.png\|left\|200px]]
-
	{{STRUCTURE_4ba1\| PDB=4ba1 \| SCENE= }}		{{STRUCTURE_4ba1\| PDB=4ba1 \| SCENE= }}
-
	===Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate===		===Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate===
-
	{{ABSTRACT_PUBMED_23319881}}		{{ABSTRACT_PUBMED_23319881}}
		+
		+	==Function==
		+	[[http://www.uniprot.org/uniprot/ECX2_SULSO ECX2_SULSO]] Probably involved in the 3'->5' degradation of a variety of RNA species (Potential). [[http://www.uniprot.org/uniprot/ECR1_SULSO ECR1_SULSO]] Probably involved in degradation of a variety of RNA species; could act a RNA-binding component of the exosome (Potential). [[http://www.uniprot.org/uniprot/ECX1_SULSO ECX1_SULSO]] Probably involved in the 3'->5' degradation of a variety of RNA species (Potential).

	==About this Structure==		==About this Structure==
-	[[4ba1]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Sulfolobus_solfataricus Sulfolobus solfataricus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BA1 OCA].	+	[[4ba1]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_35091 Atcc 35091]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BA1 OCA].
-	[[Category: ~~Sulfolobus solfataricus~~]]	+
		+	==Reference==
		+	<ref group="xtra">PMID:023319881</ref><references group="xtra"/><references/>
		+	[[Category: Atcc 35091]]
	[[Category: Conti, E.]]		[[Category: Conti, E.]]
	[[Category: Lorentzen, E.]]		[[Category: Lorentzen, E.]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Rna degradation]]		[[Category: Rna degradation]]

OCA at 12:33, 30 January 2013

OCA — Wed, 30 Jan 2013 12:33:09 GMT

←Older revision		Revision as of 12:33, 30 January 2013
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	===Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate===		===Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate===

		+	{{ABSTRACT_PUBMED_23319881}}

	==About this Structure==		==About this Structure==

OCA at 14:44, 28 November 2012

OCA — Wed, 28 Nov 2012 14:44:49 GMT

←Older revision		Revision as of 14:44, 28 November 2012
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-	[[Image:4ba1.~~jpg~~\|left\|200px]]	+	[[Image:4ba1.png\|left\|200px]]

	{{STRUCTURE_4ba1\| PDB=4ba1 \| SCENE= }}		{{STRUCTURE_4ba1\| PDB=4ba1 \| SCENE= }}
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	[[Category: Conti, E.]]		[[Category: Conti, E.]]
	[[Category: Lorentzen, E.]]		[[Category: Lorentzen, E.]]
-	[[Category: Hydroalse]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Rna degradation]]		[[Category: Rna degradation]]

OCA at 06:24, 3 October 2012

OCA — Wed, 03 Oct 2012 06:24:31 GMT

←Older revision		Revision as of 06:24, 3 October 2012
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-	~~'''Unreleased structure'''~~	+	[[Image:4ba1.jpg\|left\|200px]]

-	~~The entry~~ 4ba1 ~~is ON HOLD~~ ~~until Paper Publication~~	+	{{STRUCTURE_4ba1\| PDB=4ba1 \| SCENE= }}

-	~~Authors: Lorentzen, E., Conti, E.~~	+	===Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate===

-	~~Description~~: ~~Archaeal exosome (Rrp4~~-~~Rrp41(D182A)-Rrp42) bound to inorganic phosphate~~	+
		+	==About this Structure==
		+	[[4ba1]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus Sulfolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BA1 OCA].
		+	[[Category: Sulfolobus solfataricus]]
		+	[[Category: Conti, E.]]
		+	[[Category: Lorentzen, E.]]
		+	[[Category: Hydroalse]]
		+	[[Category: Hydrolase]]
		+	[[Category: Rna degradation]]

OCA at 19:59, 26 September 2012

OCA — Wed, 26 Sep 2012 19:59:13 GMT

←Older revision		Revision as of 19:59, 26 September 2012
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4ba1 is ON HOLD	+	The entry 4ba1 is ON HOLD until Paper Publication

	Authors: Lorentzen, E., Conti, E.		Authors: Lorentzen, E., Conti, E.

	Description: Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate		Description: Archaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphate