4bm5 - Revision history

OCA at 11:02, 9 May 2024

OCA — Thu, 09 May 2024 11:02:20 GMT

←Older revision		Revision as of 11:02, 9 May 2024
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	<StructureSection load='4bm5' size='340' side='right'caption='[[4bm5]], [[Resolution\|resolution]] 4.20Å' scene=''>		<StructureSection load='4bm5' size='340' side='right'caption='[[4bm5]], [[Resolution\|resolution]] 4.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4bm5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Cyame Cyame~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BM5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BM5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4bm5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cyanidioschyzon_merolae Cyanidioschyzon merolae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BM5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BM5 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4bm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bm5 OCA], [https://pdbe.org/4bm5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4bm5 RCSB], [https://www.ebi.ac.uk/pdbsum/4bm5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4bm5 ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 4.2Å</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4bm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bm5 OCA], [https://pdbe.org/4bm5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4bm5 RCSB], [https://www.ebi.ac.uk/pdbsum/4bm5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4bm5 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/M1V6H9_CYAM1 M1V6H9_CYAM1]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Cyame~~]]	+	[[Category: Cyanidioschyzon merolae]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Chen, L J]]	+	[[Category: Chen L-J]]
-	[[Category: Chu, C C]]	+	[[Category: Chu C-C]]
-	[[Category: Hsiao, C D]]	+	[[Category: Hsiao C-D]]
-	[[Category: Li, H m]]	+	[[Category: Li H-m]]
-	[[Category: Tsai, J Y]]	+	[[Category: Tsai J-Y]]
-	[[Category: Yeh, Y H]]	+	[[Category: Yeh Y-H]]
-	~~[[Category: Protein transport~~]]	+

OCA at 07:18, 31 August 2022

OCA — Wed, 31 Aug 2022 07:18:19 GMT

←Older revision		Revision as of 07:18, 31 August 2022
Line 3:		Line 3:
	<StructureSection load='4bm5' size='340' side='right'caption='[[4bm5]], [[Resolution\|resolution]] 4.20Å' scene=''>		<StructureSection load='4bm5' size='340' side='right'caption='[[4bm5]], [[Resolution\|resolution]] 4.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4bm5]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Cyame Cyame]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BM5 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4BM5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4bm5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cyame Cyame]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BM5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BM5 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4bm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bm5 OCA], [~~http~~://pdbe.org/4bm5 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4bm5 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4bm5 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4bm5 ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4bm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bm5 OCA], [https://pdbe.org/4bm5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4bm5 RCSB], [https://www.ebi.ac.uk/pdbsum/4bm5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4bm5 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 13:57, 13 March 2019

OCA — Wed, 13 Mar 2019 13:57:37 GMT

←Older revision		Revision as of 13:57, 13 March 2019
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	==Chloroplast inner membrane protein TIC110==		==Chloroplast inner membrane protein TIC110==
-	<StructureSection load='4bm5' size='340' side='right' caption='[[4bm5]], [[Resolution\|resolution]] 4.20Å' scene=''>	+	<StructureSection load='4bm5' size='340' side='right'caption='[[4bm5]], [[Resolution\|resolution]] 4.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4bm5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cyame Cyame]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BM5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4BM5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[4bm5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cyame Cyame]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BM5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4BM5 FirstGlance]. <br>
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Cyame]]		[[Category: Cyame]]
		+	[[Category: Large Structures]]
	[[Category: Chen, L J]]		[[Category: Chen, L J]]
	[[Category: Chu, C C]]		[[Category: Chu, C C]]

OCA at 01:03, 5 August 2016

OCA — Fri, 05 Aug 2016 01:03:09 GMT

←Older revision		Revision as of 01:03, 5 August 2016
Line 1:		Line 1:
		+
	==Chloroplast inner membrane protein TIC110==		==Chloroplast inner membrane protein TIC110==
	<StructureSection load='4bm5' size='340' side='right' caption='[[4bm5]], [[Resolution\|resolution]] 4.20Å' scene=''>		<StructureSection load='4bm5' size='340' side='right' caption='[[4bm5]], [[Resolution\|resolution]] 4.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4bm5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Cyanidioschyzon_merolae Cyanidioschyzon merolae~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BM5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4BM5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4bm5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cyame Cyame]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BM5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4BM5 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4bm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bm5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4bm5 RCSB], [http://www.ebi.ac.uk/pdbsum/4bm5 PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4bm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bm5 OCA], [http://pdbe.org/4bm5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4bm5 RCSB], [http://www.ebi.ac.uk/pdbsum/4bm5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4bm5 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 4bm5" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Cyanidioschyzon merolae~~]]	+	[[Category: Cyame]]
	[[Category: Chen, L J]]		[[Category: Chen, L J]]
	[[Category: Chu, C C]]		[[Category: Chu, C C]]

OCA at 10:05, 21 December 2014

OCA — Sun, 21 Dec 2014 10:05:17 GMT

←Older revision		Revision as of 10:05, 21 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_4bm5\| PDB~~=4bm5 \| ~~SCENE~~= }}	+	==Chloroplast inner membrane protein TIC110==
-	===~~Chloroplast inner membrane protein TIC110~~===	+	<StructureSection load='4bm5' size='340' side='right' caption='[[4bm5]], [[Resolution\|resolution]] 4.20Å' scene=''>
-	~~{{ABSTRACT_PUBMED_23711301}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4bm5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cyanidioschyzon_merolae Cyanidioschyzon merolae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BM5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4BM5 FirstGlance]. <br>
		+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4bm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bm5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4bm5 RCSB], [http://www.ebi.ac.uk/pdbsum/4bm5 PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Tic110 is a major component of the chloroplast protein import translocon. Two functions with mutually exclusive structures have been proposed for Tic110: a protein-conducting channel with six transmembrane domains and a scaffold with two N-terminal transmembrane domains followed by a large soluble domain for binding transit peptides and other stromal translocon components. To investigate the structure of Tic110, Tic110 from Cyanidioschyzon merolae (CmTic110) was characterized. We constructed three fragments, CmTic110A , CmTic110B and CmTic110C , with increasing N-terminal truncations, to perform small-angle X-ray scattering (SAXS) and X-ray crystallography analyses and DALI structural comparison. Here we report the molecular envelope of CmTic110B and CmTic110C determined by SAXS, and the crystal structure of CmTic110C at 4.2 A. Our data indicate that the C-terminal half of CmTic110 possesses a rod-shaped helix-repeat structure that is too flattened and elongated to be a channel. The structure is most similar to the HEAT-repeat motif that functions as scaffolds for protein-protein interactions. This article is protected by copyright. All rights reserved.

-	~~==About this Structure==~~	+	Structural characterizations of chloroplast translocon protein Tic110.,Tsai JY, Chu CC, Yeh YH, Chen LJ, Li HM, Hsiao CD Plant J. 2013 May 25. doi: 10.1111/tpj.12249. PMID:23711301<ref>PMID:23711301</ref>
-	~~[[4bm5]] is a 1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Cyanidioschyzon_merolae Cyanidioschyzon merolae]~~. ~~Full crystallographic information is available from [http~~:/~~/oca~~.~~weizmann~~.~~ac.il~~/~~oca-bin/ocashort?id=4BM5 OCA].~~	+

-	==~~Reference~~==	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~<ref group="xtra">PMID:023711301</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	</div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Cyanidioschyzon merolae]]		[[Category: Cyanidioschyzon merolae]]
-	[[Category: Chen, L J.]]	+	[[Category: Chen, L J]]
-	[[Category: Chu, C C.]]	+	[[Category: Chu, C C]]
-	[[Category: Hsiao, C D.]]	+	[[Category: Hsiao, C D]]
-	[[Category: Li, H m.]]	+	[[Category: Li, H m]]
-	[[Category: Tsai, J Y.]]	+	[[Category: Tsai, J Y]]
-	[[Category: Yeh, Y H.]]	+	[[Category: Yeh, Y H]]
	[[Category: Protein transport]]		[[Category: Protein transport]]

OCA at 15:01, 19 June 2013

OCA — Wed, 19 Jun 2013 15:01:24 GMT

←Older revision		Revision as of 15:01, 19 June 2013
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{STRUCTURE_4bm5\| PDB=4bm5 \| SCENE= }}
		+	===Chloroplast inner membrane protein TIC110===
		+	{{ABSTRACT_PUBMED_23711301}}

-	~~The entry~~ 4bm5 is ~~ON HOLD~~	+	==About this Structure==
		+	[[4bm5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cyanidioschyzon_merolae Cyanidioschyzon merolae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BM5 OCA].

-	~~Authors~~: ~~Tsai~~, J.~~-Y.,~~ Chu, C.-C., ~~Yeh, Y~~.~~-H., Chen, L.-J.,~~ Li, H.-m., ~~Hsiao, C.-D~~.	+	==Reference==
-		+	<ref group="xtra">PMID:023711301</ref><references group="xtra"/><references/>
-	~~Description~~: ~~Structure of cmC~~	+	[[Category: Cyanidioschyzon merolae]]
		+	[[Category: Chen, L J.]]
		+	[[Category: Chu, C C.]]
		+	[[Category: Hsiao, C D.]]
		+	[[Category: Li, H m.]]
		+	[[Category: Tsai, J Y.]]
		+	[[Category: Yeh, Y H.]]
		+	[[Category: Protein transport]]

OCA: Protected "4bm5" [edit=sysop:move=sysop]

OCA — Thu, 16 May 2013 06:42:13 GMT

Protected "4bm5" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:42, 16 May 2013

OCA: New page: '''Unreleased structure''' The entry 4bm5 is ON HOLD Authors: Tsai, J.-Y., Chu, C.-C., Yeh, Y.-H., Chen, L.-J., Li, H.-m., Hsiao, C.-D. Description: Structure of cmC

OCA — Thu, 16 May 2013 06:42:12 GMT

New page: '''Unreleased structure''' The entry 4bm5 is ON HOLD Authors: Tsai, J.-Y., Chu, C.-C., Yeh, Y.-H., Chen, L.-J., Li, H.-m., Hsiao, C.-D. Description: Structure of cmC

New page

'''Unreleased structure'''

The entry 4bm5 is ON HOLD

Authors: Tsai, J.-Y., Chu, C.-C., Yeh, Y.-H., Chen, L.-J., Li, H.-m., Hsiao, C.-D.

Description: Structure of cmC