4d6v - Revision history

OCA at 12:21, 20 December 2023

OCA — Wed, 20 Dec 2023 12:21:44 GMT

←Older revision		Revision as of 12:21, 20 December 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4d6v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cryptococcus_neoformans_var._grubii_H99 Cryptococcus neoformans var. grubii H99]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D6V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4D6V FirstGlance]. <br>		<table><tr><td colspan='2'>[[4d6v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cryptococcus_neoformans_var._grubii_H99 Cryptococcus neoformans var. grubii H99]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D6V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4D6V FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4d6v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d6v OCA], [https://pdbe.org/4d6v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4d6v RCSB], [https://www.ebi.ac.uk/pdbsum/4d6v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4d6v ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.2Å</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4d6v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d6v OCA], [https://pdbe.org/4d6v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4d6v RCSB], [https://www.ebi.ac.uk/pdbsum/4d6v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4d6v ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/J9W3X8_CRYNH J9W3X8_CRYNH]]	+	[https://www.uniprot.org/uniprot/J9W3X8_CRYNH J9W3X8_CRYNH]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 07:49, 14 September 2022

OCA — Wed, 14 Sep 2022 07:49:59 GMT

←Older revision		Revision as of 07:49, 14 September 2022
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	<StructureSection load='4d6v' size='340' side='right'caption='[[4d6v]], [[Resolution\|resolution]] 2.20Å' scene=''>		<StructureSection load='4d6v' size='340' side='right'caption='[[4d6v]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4d6v]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Crynh Crynh~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D6V OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4D6V FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4d6v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cryptococcus_neoformans_var._grubii_H99 Cryptococcus neoformans var. grubii H99]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D6V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4D6V FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4d6v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d6v OCA], [~~http~~://pdbe.org/4d6v PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4d6v RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4d6v PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4d6v ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4d6v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d6v OCA], [https://pdbe.org/4d6v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4d6v RCSB], [https://www.ebi.ac.uk/pdbsum/4d6v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4d6v ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[https://www.uniprot.org/uniprot/J9W3X8_CRYNH J9W3X8_CRYNH]]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Crynh~~]]	+	[[Category: Cryptococcus neoformans var. grubii H99]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Bu, W]]	+	[[Category: Bu W]]
-	[[Category: Chen, Y]]	+	[[Category: Chen Y]]
-	[[Category: Dimitrova~~, V T~~]]	+	[[Category: Dimitrova VT]]
-	[[Category: Ero, R]]	+	[[Category: Ero R]]
-	[[Category: Feng, S]]	+	[[Category: Feng S]]
-	[[Category: Gao~~, Y G~~]]	+	[[Category: Gao YG]]
-	[[Category: Liu, T]]	+	[[Category: Liu T]]
-	[[Category: Tan~~, S M~~]]	+	[[Category: Tan SM]]
-	[[Category: Wang, P]]	+	[[Category: Wang P]]
-	[[Category: Xue, C]]	+	[[Category: Xue C]]
-	~~[[Category: Ribosome binding]]~~	+
-	~~[[Category: Scaffold protein]]~~	+
-	~~[[Category: Signaling protein~~]]	+

OCA at 07:57, 27 March 2019

OCA — Wed, 27 Mar 2019 07:57:12 GMT

←Older revision		Revision as of 07:57, 27 March 2019
Line 1:		Line 1:

	==Crystal structure of signal transducing protein==		==Crystal structure of signal transducing protein==
-	<StructureSection load='4d6v' size='340' side='right' caption='[[4d6v]], [[Resolution\|resolution]] 2.20Å' scene=''>	+	<StructureSection load='4d6v' size='340' side='right'caption='[[4d6v]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4d6v]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D6V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4D6V FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4d6v]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Crynh Crynh]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D6V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4D6V FirstGlance]. <br>
	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4d6v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d6v OCA], [http://pdbe.org/4d6v PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4d6v RCSB], [http://www.ebi.ac.uk/pdbsum/4d6v PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4d6v ProSAT]</span></td></tr>		</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4d6v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d6v OCA], [http://pdbe.org/4d6v PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4d6v RCSB], [http://www.ebi.ac.uk/pdbsum/4d6v PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4d6v ProSAT]</span></td></tr>
	</table>		</table>
Line 19:		Line 19:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Crynh]]
		+	[[Category: Large Structures]]
	[[Category: Bu, W]]		[[Category: Bu, W]]
	[[Category: Chen, Y]]		[[Category: Chen, Y]]

OCA at 07:16, 23 December 2016

OCA — Fri, 23 Dec 2016 07:16:20 GMT

←Older revision		Revision as of 07:16, 23 December 2016
Line 1:		Line 1:
		+
	==Crystal structure of signal transducing protein==		==Crystal structure of signal transducing protein==
	<StructureSection load='4d6v' size='340' side='right' caption='[[4d6v]], [[Resolution\|resolution]] 2.20Å' scene=''>		<StructureSection load='4d6v' size='340' side='right' caption='[[4d6v]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4d6v]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D6V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4D6V FirstGlance]. <br>		<table><tr><td colspan='2'>[[4d6v]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D6V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4D6V FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4d6v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d6v OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4d6v RCSB], [http://www.ebi.ac.uk/pdbsum/4d6v PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4d6v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d6v OCA], [http://pdbe.org/4d6v PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4d6v RCSB], [http://www.ebi.ac.uk/pdbsum/4d6v PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4d6v ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 4d6v" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 12:03, 18 March 2015

OCA — Wed, 18 Mar 2015 12:03:29 GMT

←Older revision		Revision as of 12:03, 18 March 2015
Line 1:		Line 1:
-	'''~~Unreleased~~ structure'''	+	==Crystal structure of signal transducing protein==
		+	<StructureSection load='4d6v' size='340' side='right' caption='[[4d6v]], [[Resolution\|resolution]] 2.20Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4d6v]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D6V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4D6V FirstGlance]. <br>
		+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4d6v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d6v OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4d6v RCSB], [http://www.ebi.ac.uk/pdbsum/4d6v PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The atypical Gbeta-like/RACK1 Gib2 protein promotes cAMP signalling that plays a central role in regulating the virulence of Cryptococcus neoformans. Gib2 contains a seven-bladed beta transducin structure and is emerging as a scaffold protein interconnecting signalling pathways through interactions with various protein partners. Here, we present the crystal structure of Gib2 at a 2.2-A resolution. The structure allows us to analyse the association between Gib2 and the ribosome, as well as to identify the Gib2 amino acid residues involved in ribosome binding. Our studies not only suggest that Gib2 has a role in protein translation but also present Gib2 as a physical link at the crossroads of various regulatory pathways important for the growth and virulence of C. neoformans.

-	~~The entry 4d6v is ON HOLD until Paper Publication~~	+	Crystal structure of Gib2, a signal-transducing protein scaffold associated with ribosomes in Cryptococcus neoformans.,Ero R, Dimitrova VT, Chen Y, Bu W, Feng S, Liu T, Wang P, Xue C, Tan SM, Gao YG Sci Rep. 2015 Mar 3;5:8688. doi: 10.1038/srep08688. PMID:25732347<ref>PMID:25732347</ref>

-	~~Authors: Ero~~, R.~~, Dimitrova, V~~.T.~~, Chen, Y.,~~ Bu, W~~., Feng, S., Liu, T., Wang, P., Xue, C., Tan, S.M., Gao~~, Y~~.G.~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~Description~~: ~~Crystal structure of signal transducing protein~~	+	== References ==
-	[[Category: ~~Unreleased Structures~~]]	+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Bu, W]]
		+	[[Category: Chen, Y]]
		+	[[Category: Dimitrova, V T]]
		+	[[Category: Ero, R]]
	[[Category: Feng, S]]		[[Category: Feng, S]]
-	[[Category: ~~Tan, S.M]]~~	+	[[Category: Gao, Y G]]
-	~~[[Category: Ero, R]]~~	+
-	~~[[Category: Chen~~, Y]]	+
	[[Category: Liu, T]]		[[Category: Liu, T]]
-	[[Category: ~~Gao~~, ~~Y.G~~]]	+	[[Category: Tan, S M]]
-	[[Category: Bu, W]]	+	[[Category: Wang, P]]
	[[Category: Xue, C]]		[[Category: Xue, C]]
-	[[Category: ~~Wang, P~~]]	+	[[Category: Ribosome binding]]
-	[[Category: ~~Dimitrova, V.T~~]]	+	[[Category: Scaffold protein]]
		+	[[Category: Signaling protein]]

OCA at 13:54, 24 December 2014

OCA — Wed, 24 Dec 2014 13:54:10 GMT

←Older revision		Revision as of 13:54, 24 December 2014
Line 6:		Line 6:

	Description: Crystal structure of signal transducing protein		Description: Crystal structure of signal transducing protein
		+	[[Category: Unreleased Structures]]
		+	[[Category: Feng, S]]
		+	[[Category: Tan, S.M]]
		+	[[Category: Ero, R]]
		+	[[Category: Chen, Y]]
		+	[[Category: Liu, T]]
		+	[[Category: Gao, Y.G]]
		+	[[Category: Bu, W]]
		+	[[Category: Xue, C]]
		+	[[Category: Wang, P]]
		+	[[Category: Dimitrova, V.T]]

OCA at 12:56, 10 December 2014

OCA — Wed, 10 Dec 2014 12:56:06 GMT

←Older revision		Revision as of 12:56, 10 December 2014
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4d6v is ON HOLD	+	The entry 4d6v is ON HOLD until Paper Publication

	Authors: Ero, R., Dimitrova, V.T., Chen, Y., Bu, W., Feng, S., Liu, T., Wang, P., Xue, C., Tan, S.M., Gao, Y.G.		Authors: Ero, R., Dimitrova, V.T., Chen, Y., Bu, W., Feng, S., Liu, T., Wang, P., Xue, C., Tan, S.M., Gao, Y.G.

	Description: Crystal structure of signal transducing protein		Description: Crystal structure of signal transducing protein

OCA: Protected "4d6v" [edit=sysop:move=sysop]

OCA — Wed, 26 Nov 2014 06:27:11 GMT

Protected "4d6v" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:27, 26 November 2014

OCA: New page: '''Unreleased structure''' The entry 4d6v is ON HOLD Authors: Ero, R., Dimitrova, V.T., Chen, Y., Bu, W., Feng, S., Liu, T., Wang, P., Xue, C., Tan, S.M., Gao, Y.G. Description: Crysta...

OCA — Wed, 26 Nov 2014 06:27:10 GMT

New page: '''Unreleased structure''' The entry 4d6v is ON HOLD Authors: Ero, R., Dimitrova, V.T., Chen, Y., Bu, W., Feng, S., Liu, T., Wang, P., Xue, C., Tan, S.M., Gao, Y.G. Description: Crysta...

New page

'''Unreleased structure'''

The entry 4d6v is ON HOLD

Authors: Ero, R., Dimitrova, V.T., Chen, Y., Bu, W., Feng, S., Liu, T., Wang, P., Xue, C., Tan, S.M., Gao, Y.G.

Description: Crystal structure of signal transducing protein