4dkm - Revision history

OCA at 08:20, 6 December 2023

OCA — Wed, 06 Dec 2023 08:20:52 GMT

←Older revision		Revision as of 08:20, 6 December 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4dkm]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Branchiostoma_floridae Branchiostoma floridae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DKM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DKM FirstGlance]. <br>		<table><tr><td colspan='2'>[[4dkm]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Branchiostoma_floridae Branchiostoma floridae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DKM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DKM FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.95Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dkm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dkm OCA], [https://pdbe.org/4dkm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dkm RCSB], [https://www.ebi.ac.uk/pdbsum/4dkm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dkm ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dkm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dkm OCA], [https://pdbe.org/4dkm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dkm RCSB], [https://www.ebi.ac.uk/pdbsum/4dkm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dkm ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/C3YRA3_BRAFL C3YRA3_BRAFL]]	+	[https://www.uniprot.org/uniprot/C3YRA3_BRAFL C3YRA3_BRAFL]

	==See Also==		==See Also==

OCA at 08:23, 21 September 2022

OCA — Wed, 21 Sep 2022 08:23:10 GMT

←Older revision		Revision as of 08:23, 21 September 2022
Line 1:		Line 1:

	==Crystal Structure of Amphioxus GFPc1a==		==Crystal Structure of Amphioxus GFPc1a==
-	<StructureSection load='4dkm' size='340' side='right' caption='[[4dkm]], [[Resolution\|resolution]] 1.95Å' scene=''>	+	<StructureSection load='4dkm' size='340' side='right'caption='[[4dkm]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4dkm]] is a 8 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Amphioxus Amphioxus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DKM OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4DKM FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4dkm]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Branchiostoma_floridae Branchiostoma floridae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DKM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DKM FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BRAFLDRAFT_75523 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7739 Amphioxus])~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dkm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dkm OCA], [https://pdbe.org/4dkm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dkm RCSB], [https://www.ebi.ac.uk/pdbsum/4dkm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dkm ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4dkm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dkm OCA], [~~http~~://pdbe.org/4dkm PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4dkm RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4dkm PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4dkm ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[[https://www.uniprot.org/uniprot/C3YRA3_BRAFL C3YRA3_BRAFL]]

	==See Also==		==See Also==
-	*[[Green Fluorescent Protein\|Green Fluorescent Protein]]	+	*[[Green Fluorescent Protein 3D structures\|Green Fluorescent Protein 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Amphioxus~~]]	+	[[Category: Branchiostoma floridae]]
-	[[Category: ~~Bomati, E K~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Deheyn, D D~~]]	+	[[Category: Bomati EK]]
-	[[Category: ~~Beta-can]]~~	+	[[Category: Deheyn DD]]
-	~~[[Category: Chromophore]]~~	+
-	~~[[Category: Fluorescent protein~~]]	+

OCA at 13:52, 5 August 2016

OCA — Fri, 05 Aug 2016 13:52:12 GMT

←Older revision		Revision as of 13:52, 5 August 2016
Line 1:		Line 1:
		+
	==Crystal Structure of Amphioxus GFPc1a==		==Crystal Structure of Amphioxus GFPc1a==
	<StructureSection load='4dkm' size='340' side='right' caption='[[4dkm]], [[Resolution\|resolution]] 1.95Å' scene=''>		<StructureSection load='4dkm' size='340' side='right' caption='[[4dkm]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4dkm]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Branchiostoma_floridae Branchiostoma floridae~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DKM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DKM FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4dkm]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Amphioxus Amphioxus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DKM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DKM FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BRAFLDRAFT_75523 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7739 ~~Branchiostoma floridae~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BRAFLDRAFT_75523 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7739 Amphioxus])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dkm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dkm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dkm RCSB], [http://www.ebi.ac.uk/pdbsum/4dkm PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dkm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dkm OCA], [http://pdbe.org/4dkm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4dkm RCSB], [http://www.ebi.ac.uk/pdbsum/4dkm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4dkm ProSAT]</span></td></tr>
	</table>		</table>

Line 12:		Line 13:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Branchiostoma floridae~~]]	+	[[Category: Amphioxus]]
	[[Category: Bomati, E K]]		[[Category: Bomati, E K]]
	[[Category: Deheyn, D D]]		[[Category: Deheyn, D D]]

OCA at 09:49, 21 December 2014

OCA — Sun, 21 Dec 2014 09:49:39 GMT

←Older revision		Revision as of 09:49, 21 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_4dkm~~\| ~~PDB~~=4dkm \| ~~SCENE~~= }}	+	==Crystal Structure of Amphioxus GFPc1a==
-	===~~Crystal Structure of Amphioxus GFPc1a~~===	+	<StructureSection load='4dkm' size='340' side='right' caption='[[4dkm]], [[Resolution\|resolution]] 1.95Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4dkm]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Branchiostoma_floridae Branchiostoma floridae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DKM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DKM FirstGlance]. <br>
		+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BRAFLDRAFT_75523 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7739 Branchiostoma floridae])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dkm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dkm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dkm RCSB], [http://www.ebi.ac.uk/pdbsum/4dkm PDBsum]</span></td></tr>
		+	</table>

-	==~~About this Structure~~==	+	==See Also==
-	[[~~4dkm~~]] ~~is a 8 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Branchiostoma_floridae Branchiostoma floridae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DKM OCA].~~	+	*[[Green Fluorescent Protein\|Green Fluorescent Protein]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Branchiostoma floridae]]		[[Category: Branchiostoma floridae]]
-	[[Category: Bomati, E K.]]	+	[[Category: Bomati, E K]]
-	[[Category: Deheyn, D D.]]	+	[[Category: Deheyn, D D]]
	[[Category: Beta-can]]		[[Category: Beta-can]]
	[[Category: Chromophore]]		[[Category: Chromophore]]
	[[Category: Fluorescent protein]]		[[Category: Fluorescent protein]]

OCA at 07:28, 16 May 2013

OCA — Thu, 16 May 2013 07:28:15 GMT

←Older revision		Revision as of 07:28, 16 May 2013
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{STRUCTURE_4dkm\| PDB=4dkm \| SCENE= }}
		+	===Crystal Structure of Amphioxus GFPc1a===

-	~~The entry~~ 4dkm is ~~ON HOLD until May 15 2014~~	+	==About this Structure==
-		+	[[4dkm]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Branchiostoma_floridae Branchiostoma floridae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DKM OCA].
-	~~Authors~~: ~~Deheyn, D~~.D., Bomati, E.K.	+	[[Category: Branchiostoma floridae]]
-		+	[[Category: Bomati, E K.]]
-	~~Description~~: ~~Crystal Structure of Amphioxus GFPc1a~~	+	[[Category: Deheyn, D D.]]
		+	[[Category: Beta-can]]
		+	[[Category: Chromophore]]
		+	[[Category: Fluorescent protein]]

OCA at 07:06, 8 May 2013

OCA — Wed, 08 May 2013 07:06:39 GMT

←Older revision		Revision as of 07:06, 8 May 2013
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4dkm is ON HOLD until May 08 2014	+	The entry 4dkm is ON HOLD until May 15 2014

	Authors: Deheyn, D.D., Bomati, E.K.		Authors: Deheyn, D.D., Bomati, E.K.

	Description: Crystal Structure of Amphioxus GFPc1a		Description: Crystal Structure of Amphioxus GFPc1a

OCA at 08:13, 16 January 2013

OCA — Wed, 16 Jan 2013 08:13:57 GMT

←Older revision		Revision as of 08:13, 16 January 2013
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4dkm is ON HOLD until ~~Paper Publication~~	+	The entry 4dkm is ON HOLD until May 08 2014

	Authors: Deheyn, D.D., Bomati, E.K.		Authors: Deheyn, D.D., Bomati, E.K.

	Description: Crystal Structure of Amphioxus GFPc1a		Description: Crystal Structure of Amphioxus GFPc1a

OCA: Protected "4dkm" [edit=sysop:move=sysop]

OCA — Wed, 15 Feb 2012 06:22:25 GMT

Protected "4dkm" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:22, 15 February 2012

OCA: New page: '''Unreleased structure''' The entry 4dkm is ON HOLD until Paper Publication Authors: Deheyn, D.D., Bomati, E.K. Description: Crystal Structure of Amphioxus GFPc1a

OCA — Wed, 15 Feb 2012 06:22:24 GMT

New page: '''Unreleased structure''' The entry 4dkm is ON HOLD until Paper Publication Authors: Deheyn, D.D., Bomati, E.K. Description: Crystal Structure of Amphioxus GFPc1a

New page

'''Unreleased structure'''

The entry 4dkm is ON HOLD until Paper Publication

Authors: Deheyn, D.D., Bomati, E.K.

Description: Crystal Structure of Amphioxus GFPc1a