4dzt - Revision history

OCA at 14:48, 14 March 2024

OCA — Thu, 14 Mar 2024 14:48:40 GMT

←Older revision		Revision as of 14:48, 14 March 2024
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4dzt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DZT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DZT FirstGlance]. <br>		<table><tr><td colspan='2'>[[4dzt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DZT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DZT FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PMS:PHENYLMETHANESULFONIC+ACID'>PMS</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.95Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PMS:PHENYLMETHANESULFONIC+ACID'>PMS</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dzt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dzt OCA], [https://pdbe.org/4dzt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dzt RCSB], [https://www.ebi.ac.uk/pdbsum/4dzt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dzt ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dzt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dzt OCA], [https://pdbe.org/4dzt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dzt RCSB], [https://www.ebi.ac.uk/pdbsum/4dzt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dzt ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/AQL1_THEAQ AQL1_THEAQ]] Aqualysin I is a thermophilic alkaline serine protease.	+	[https://www.uniprot.org/uniprot/AQL1_THEAQ AQL1_THEAQ] Aqualysin I is a thermophilic alkaline serine protease.
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 08:45, 21 September 2022

OCA — Wed, 21 Sep 2022 08:45:14 GMT

←Older revision		Revision as of 08:45, 21 September 2022
Line 3:		Line 3:
	<StructureSection load='4dzt' size='340' side='right'caption='[[4dzt]], [[Resolution\|resolution]] 1.95Å' scene=''>		<StructureSection load='4dzt' size='340' side='right'caption='[[4dzt]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4dzt]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DZT OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4DZT FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4dzt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DZT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DZT FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PMS:PHENYLMETHANESULFONIC+ACID'>PMS</scene~~></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PMS:PHENYLMETHANESULFONIC+ACID'>PMS</scene></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2prk\|2prk]], [[1sup\|1sup]], [[2gko\|2gko]], [[1svn\|1svn]]</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dzt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dzt OCA], [https://pdbe.org/4dzt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dzt RCSB], [https://www.ebi.ac.uk/pdbsum/4dzt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dzt ProSAT]</span></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aqualysin_1 Aqualysin 1], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.111 3.4.21.111] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4dzt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dzt OCA], [~~http~~://pdbe.org/4dzt PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4dzt RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4dzt PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4dzt ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/AQL1_THEAQ AQL1_THEAQ]] Aqualysin I is a thermophilic alkaline serine protease.	+	[[https://www.uniprot.org/uniprot/AQL1_THEAQ AQL1_THEAQ]] Aqualysin I is a thermophilic alkaline serine protease.
-	~~<div style="background-color:#fffaf0;">~~	+
-	~~== Publication Abstract from PubMed ==~~	+
-	Aqualysin I, a thermostable protease found in the culture medium of Thermus aquaticus YT-1, has been purified to homogeneity using a combination of ion-exchange and affinity chromatography. It is a polypeptide with a molecular weight of 28 350 [Kwon, Terada, Matsuzawa & Ohta (1988). Eur. J. Biochem. 173, 491-497] and is most active at 343-353 K and pH about 10.0 [Matsuzawa, Tokugawa, Hamaoki, Mizoguchi, Taguchi, Terada, Kwon & Ohta (1988). Eur. J. Biochem. 171, 441-447]. Crystals of the enzyme are monoclinic, space group P2(1), with cell dimensions a = 40.80 (5), b = 64.39 (6), c = 45.51 (6) A and beta = 109.1 (1) degrees. The asymmetric unit consists of a single molecule (V(m) = 1.99 A(3)Da(-1)). The crystals are stable to X-radiation and scatter to at least 2.8 A resolution.	+
-		+
-	Purification, crystallization and preliminary X-ray investigation of aqualysin I, a heat-stable serine protease.,Green PR, Oliver JD, Strickland LC, Toerner DR, Matsuzawa H, Ohta T Acta Crystallogr D Biol Crystallogr. 1993 May 1;49(Pt 3):349-52. PMID:15299524<ref>PMID:15299524</ref>	+
-		+
-	~~From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>~~	+
-	~~</div>~~	+
-	~~<div class="pdbe-citations 4dzt" style="background-color:#fffaf0;"></div>~~	+
-	~~== References ==~~	+
-	~~<references/>~~	+
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Aqualysin 1]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Thermus aquaticus]]		[[Category: Thermus aquaticus]]
-	[[Category: Barnett~~, B L~~]]	+	[[Category: Barnett BL]]
-	[[Category: Green~~, P R~~]]	+	[[Category: Green PR]]
-	[[Category: Oliver~~, J D~~]]	+	[[Category: Oliver JD]]
-	[[Category: Rydel, T]]	+	[[Category: Rydel T]]
-	[[Category: Strickland~~, L C~~]]	+	[[Category: Strickland LC]]
-	[[Category: Sullivan~~, J F]]~~	+	[[Category: Sullivan JF]]
-	~~[[Category: Calcium binding]]~~	+
-	~~[[Category: Hydrolase-hydrolase inhibitor complex]]~~	+
-	~~[[Category: Inhibitor]]~~	+
-	~~[[Category: Serine protease~~]]	+

OCA at 07:28, 27 March 2019

OCA — Wed, 27 Mar 2019 07:28:38 GMT

←Older revision		Revision as of 07:28, 27 March 2019
Line 1:		Line 1:

	==Aqualysin I: the crystal structure of a serine protease from an extreme thermophile, Thermus aquaticus YT-1==		==Aqualysin I: the crystal structure of a serine protease from an extreme thermophile, Thermus aquaticus YT-1==
-	<StructureSection load='4dzt' size='340' side='right' caption='[[4dzt]], [[Resolution\|resolution]] 1.95Å' scene=''>	+	<StructureSection load='4dzt' size='340' side='right'caption='[[4dzt]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4dzt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DZT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DZT FirstGlance]. <br>		<table><tr><td colspan='2'>[[4dzt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DZT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DZT FirstGlance]. <br>
Line 25:		Line 25:
	</StructureSection>		</StructureSection>
	[[Category: Aqualysin 1]]		[[Category: Aqualysin 1]]
		+	[[Category: Large Structures]]
	[[Category: Thermus aquaticus]]		[[Category: Thermus aquaticus]]
	[[Category: Barnett, B L]]		[[Category: Barnett, B L]]

OCA at 19:40, 11 August 2016

OCA — Thu, 11 Aug 2016 19:40:32 GMT

←Older revision		Revision as of 19:40, 11 August 2016
Line 1:		Line 1:
		+
	==Aqualysin I: the crystal structure of a serine protease from an extreme thermophile, Thermus aquaticus YT-1==		==Aqualysin I: the crystal structure of a serine protease from an extreme thermophile, Thermus aquaticus YT-1==
	<StructureSection load='4dzt' size='340' side='right' caption='[[4dzt]], [[Resolution\|resolution]] 1.95Å' scene=''>		<StructureSection load='4dzt' size='340' side='right' caption='[[4dzt]], [[Resolution\|resolution]] 1.95Å' scene=''>
Line 6:		Line 7:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2prk\|2prk]], [[1sup\|1sup]], [[2gko\|2gko]], [[1svn\|1svn]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2prk\|2prk]], [[1sup\|1sup]], [[2gko\|2gko]], [[1svn\|1svn]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aqualysin_1 Aqualysin 1], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.111 3.4.21.111] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aqualysin_1 Aqualysin 1], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.111 3.4.21.111] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dzt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dzt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dzt RCSB], [http://www.ebi.ac.uk/pdbsum/4dzt PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dzt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dzt OCA], [http://pdbe.org/4dzt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4dzt RCSB], [http://www.ebi.ac.uk/pdbsum/4dzt PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4dzt ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/AQL1_THEAQ AQL1_THEAQ]] Aqualysin I is a thermophilic alkaline serine protease.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 16:		Line 19:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 4dzt" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 12:25, 4 January 2015

OCA — Sun, 04 Jan 2015 12:25:33 GMT

←Older revision		Revision as of 12:25, 4 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4dzt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DZT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DZT FirstGlance]. <br>		<table><tr><td colspan='2'>[[4dzt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DZT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DZT FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PMS:PHENYLMETHANESULFONIC+ACID'>PMS</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PMS:PHENYLMETHANESULFONIC+ACID'>PMS</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2prk\|2prk]], [[1sup\|1sup]], [[2gko\|2gko]], [[1svn\|1svn]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2prk\|2prk]], [[1sup\|1sup]], [[2gko\|2gko]], [[1svn\|1svn]]</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aqualysin_1 Aqualysin 1], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.111 3.4.21.111] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aqualysin_1 Aqualysin 1], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.111 3.4.21.111] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dzt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dzt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dzt RCSB], [http://www.ebi.ac.uk/pdbsum/4dzt PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dzt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dzt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dzt RCSB], [http://www.ebi.ac.uk/pdbsum/4dzt PDBsum]</span></td></tr>
-	<table>	+	</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 14:		Line 14:
	Purification, crystallization and preliminary X-ray investigation of aqualysin I, a heat-stable serine protease.,Green PR, Oliver JD, Strickland LC, Toerner DR, Matsuzawa H, Ohta T Acta Crystallogr D Biol Crystallogr. 1993 May 1;49(Pt 3):349-52. PMID:15299524<ref>PMID:15299524</ref>		Purification, crystallization and preliminary X-ray investigation of aqualysin I, a heat-stable serine protease.,Green PR, Oliver JD, Strickland LC, Toerner DR, Matsuzawa H, Ohta T Acta Crystallogr D Biol Crystallogr. 1993 May 1;49(Pt 3):349-52. PMID:15299524<ref>PMID:15299524</ref>

-	From ~~MEDLINEÂ®~~/~~PubMedÂ®~~, a database of the U.S. National Library of Medicine.<br>	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
	== References ==		== References ==
Line 22:		Line 22:
	[[Category: Aqualysin 1]]		[[Category: Aqualysin 1]]
	[[Category: Thermus aquaticus]]		[[Category: Thermus aquaticus]]
-	[[Category: Barnett, B L.]]	+	[[Category: Barnett, B L]]
-	[[Category: Green, P R.]]	+	[[Category: Green, P R]]
-	[[Category: Oliver, J D.]]	+	[[Category: Oliver, J D]]
-	[[Category: Rydel, T.]]	+	[[Category: Rydel, T]]
-	[[Category: Strickland, L C.]]	+	[[Category: Strickland, L C]]
-	[[Category: Sullivan, J F.]]	+	[[Category: Sullivan, J F]]
	[[Category: Calcium binding]]		[[Category: Calcium binding]]
	[[Category: Hydrolase-hydrolase inhibitor complex]]		[[Category: Hydrolase-hydrolase inhibitor complex]]
	[[Category: Inhibitor]]		[[Category: Inhibitor]]
	[[Category: Serine protease]]		[[Category: Serine protease]]

OCA at 07:22, 5 June 2014

OCA — Thu, 05 Jun 2014 07:22:13 GMT

←Older revision		Revision as of 07:22, 5 June 2014
Line 1:		Line 1:
-	[[~~Image:~~4dzt.~~jpg~~\|~~left~~\|~~200px~~]]	+	==Aqualysin I: the crystal structure of a serine protease from an extreme thermophile, Thermus aquaticus YT-1==
		+	<StructureSection load='4dzt' size='340' side='right' caption='[[4dzt]], [[Resolution\|resolution]] 1.95Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4dzt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DZT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DZT FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PMS:PHENYLMETHANESULFONIC+ACID'>PMS</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2prk\|2prk]], [[1sup\|1sup]], [[2gko\|2gko]], [[1svn\|1svn]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aqualysin_1 Aqualysin 1], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.111 3.4.21.111] </span></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dzt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dzt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dzt RCSB], [http://www.ebi.ac.uk/pdbsum/4dzt PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Aqualysin I, a thermostable protease found in the culture medium of Thermus aquaticus YT-1, has been purified to homogeneity using a combination of ion-exchange and affinity chromatography. It is a polypeptide with a molecular weight of 28 350 [Kwon, Terada, Matsuzawa & Ohta (1988). Eur. J. Biochem. 173, 491-497] and is most active at 343-353 K and pH about 10.0 [Matsuzawa, Tokugawa, Hamaoki, Mizoguchi, Taguchi, Terada, Kwon & Ohta (1988). Eur. J. Biochem. 171, 441-447]. Crystals of the enzyme are monoclinic, space group P2(1), with cell dimensions a = 40.80 (5), b = 64.39 (6), c = 45.51 (6) A and beta = 109.1 (1) degrees. The asymmetric unit consists of a single molecule (V(m) = 1.99 A(3)Da(-1)). The crystals are stable to X-radiation and scatter to at least 2.8 A resolution.

-	<!--	+	Purification, crystallization and preliminary X-ray investigation of aqualysin I, a heat-stable serine protease.,Green PR, Oliver JD, Strickland LC, Toerner DR, Matsuzawa H, Ohta T Acta Crystallogr D Biol Crystallogr. 1993 May 1;49(Pt 3):349-52. PMID:15299524<ref>PMID:15299524</ref>
-	~~The line below this paragraph~~, ~~containing "STRUCTURE_4dzt"~~, ~~creates the "Structure Box" on the page~~.	+
-	~~You may change the PDB parameter~~ (~~which sets the PDB file loaded into the applet~~)	+
-	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~	+
-	~~or leave the SCENE parameter empty for the default display.~~	+
-	-->	+
-	~~{{STRUCTURE_4dzt\| PDB=4dzt \| SCENE= }}~~	+

-	~~===Aqualysin I: the crystal structure~~ of ~~a serine protease from an extreme thermophile, Thermus aquaticus YT-1===~~	+	From MEDLINEÂ®/PubMedÂ®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-		+	== References ==
-	~~<!--~~	+	<references/>
-	~~The line below this paragraph, {{ABSTRACT_PUBMED_15299524}}, adds~~ the ~~Publication Abstract to the page~~	+	__TOC__
-	~~(as it appears on PubMed at http://www~~.~~pubmed~~.~~gov), where 15299524 is the PubMed ID number~~.	+	</StructureSection>
-	-->	+
-	~~{{ABSTRACT_PUBMED_15299524}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[4dzt]] is a 1 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DZT OCA].~~	+
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:015299524<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Aqualysin 1]]		[[Category: Aqualysin 1]]
	[[Category: Thermus aquaticus]]		[[Category: Thermus aquaticus]]

OCA at 07:54, 28 March 2012

OCA — Wed, 28 Mar 2012 07:54:28 GMT

←Older revision		Revision as of 07:54, 28 March 2012
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:4dzt.jpg\|left\|200px]]

-	The ~~entry 4dzt~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_4dzt", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_4dzt\| PDB=4dzt \| SCENE= }}

-	~~Authors~~: ~~Barnett~~, ~~B.L., Green, P.R., Strickland, L.C., Oliver, J.D., Rydel, T., Sullivan, J.F.~~	+	===Aqualysin I: the crystal structure of a serine protease from an extreme thermophile, Thermus aquaticus YT-1===

-	~~Description: Aqualysin I~~: the ~~crystal structure of~~ a ~~serine protease~~ from ~~an extreme thermophile,~~ Thermus aquaticus YT-1	+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_15299524}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 15299524 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_15299524}}
		+
		+	==About this Structure==
		+	[[4dzt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DZT OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:015299524</ref><references group="xtra"/>
		+	[[Category: Aqualysin 1]]
		+	[[Category: Thermus aquaticus]]
		+	[[Category: Barnett, B L.]]
		+	[[Category: Green, P R.]]
		+	[[Category: Oliver, J D.]]
		+	[[Category: Rydel, T.]]
		+	[[Category: Strickland, L C.]]
		+	[[Category: Sullivan, J F.]]
		+	[[Category: Calcium binding]]
		+	[[Category: Hydrolase-hydrolase inhibitor complex]]
		+	[[Category: Inhibitor]]
		+	[[Category: Serine protease]]

OCA at 07:14, 21 March 2012

OCA — Wed, 21 Mar 2012 07:14:02 GMT

←Older revision		Revision as of 07:14, 21 March 2012
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4dzt is ON HOLD	+	The entry 4dzt is ON HOLD until Paper Publication

	Authors: Barnett, B.L., Green, P.R., Strickland, L.C., Oliver, J.D., Rydel, T., Sullivan, J.F.		Authors: Barnett, B.L., Green, P.R., Strickland, L.C., Oliver, J.D., Rydel, T., Sullivan, J.F.

	Description: Aqualysin I: the crystal structure of a serine protease from an extreme thermophile, Thermus aquaticus YT-1		Description: Aqualysin I: the crystal structure of a serine protease from an extreme thermophile, Thermus aquaticus YT-1

OCA at 06:14, 14 March 2012

OCA — Wed, 14 Mar 2012 06:14:17 GMT

←Older revision		Revision as of 06:14, 14 March 2012
Line 5:		Line 5:
	Authors: Barnett, B.L., Green, P.R., Strickland, L.C., Oliver, J.D., Rydel, T., Sullivan, J.F.		Authors: Barnett, B.L., Green, P.R., Strickland, L.C., Oliver, J.D., Rydel, T., Sullivan, J.F.

-	Description: Aqualysin I: ~~The~~ crystal structure of a serine protease from an extreme thermophile, Thermus aquaticus YT-1.	+	Description: Aqualysin I: the crystal structure of a serine protease from an extreme thermophile, Thermus aquaticus YT-1

OCA: Protected "4dzt" [edit=sysop:move=sysop]

OCA — Thu, 08 Mar 2012 05:31:15 GMT

Protected "4dzt" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:31, 8 March 2012