4gzv - Revision history

OCA at 07:50, 3 November 2022

OCA — Thu, 03 Nov 2022 07:50:19 GMT

←Older revision		Revision as of 07:50, 3 November 2022
Line 1:		Line 1:

	==Crystal structure of a lipocalin family protein (BACOVA_00364) from Bacteroides ovatus ATCC 8483 at 1.95 A resolution==		==Crystal structure of a lipocalin family protein (BACOVA_00364) from Bacteroides ovatus ATCC 8483 at 1.95 A resolution==
-	<StructureSection load='4gzv' size='340' side='right' caption='[[4gzv]], [[Resolution\|resolution]] 1.95Å' scene=''>	+	<StructureSection load='4gzv' size='340' side='right'caption='[[4gzv]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4gzv]] is a 8 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Baco1 Baco1~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GZV OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4GZV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4gzv]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_ovatus_ATCC_8483 Bacteroides ovatus ATCC 8483]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GZV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4GZV FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:~~SODIUM+ION~~'>NA</scene>, <scene name='pdbligand=~~UNL~~:~~UNKNOWN~~+~~LIGAND~~'>~~UNL~~</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
-	~~<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=~~MSE~~:~~SELENOMETHIONINE~~'>~~MSE~~</scene>~~</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4gzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gzv OCA], [https://pdbe.org/4gzv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4gzv RCSB], [https://www.ebi.ac.uk/pdbsum/4gzv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4gzv ProSAT]</span></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BACOVA_00364, ZP_02063416.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=411476 BACO1])</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4gzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gzv OCA], [~~http~~://pdbe.org/4gzv PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4gzv RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4gzv PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4gzv ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A7LRD6_BACO1 A7LRD6_BACO1]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Baco1~~]]	+	[[Category: Bacteroides ovatus ATCC 8483]]
-	[[Category: ~~Structural genomic]]~~	+	[[Category: Large Structures]]
-	~~[[Category: An eight-stranded beta barrel]]~~	+
-	~~[[Category: Jcsg]]~~	+
-	~~[[Category: Lipocalin family]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Psi-biology]]~~	+
-	~~[[Category: Unknown function~~]]	+

OCA at 16:27, 5 August 2016

OCA — Fri, 05 Aug 2016 16:27:44 GMT

←Older revision		Revision as of 16:27, 5 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of a lipocalin family protein (BACOVA_00364) from Bacteroides ovatus ATCC 8483 at 1.95 A resolution==		==Crystal structure of a lipocalin family protein (BACOVA_00364) from Bacteroides ovatus ATCC 8483 at 1.95 A resolution==
	<StructureSection load='4gzv' size='340' side='right' caption='[[4gzv]], [[Resolution\|resolution]] 1.95Å' scene=''>		<StructureSection load='4gzv' size='340' side='right' caption='[[4gzv]], [[Resolution\|resolution]] 1.95Å' scene=''>
Line 6:		Line 7:
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BACOVA_00364, ZP_02063416.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=411476 BACO1])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BACOVA_00364, ZP_02063416.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=411476 BACO1])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4gzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gzv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4gzv RCSB], [http://www.ebi.ac.uk/pdbsum/4gzv PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4gzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gzv OCA], [http://pdbe.org/4gzv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4gzv RCSB], [http://www.ebi.ac.uk/pdbsum/4gzv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4gzv ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__

OCA at 11:21, 24 December 2014

OCA — Wed, 24 Dec 2014 11:21:19 GMT

←Older revision		Revision as of 11:21, 24 December 2014
Line 1:		Line 1:
-	==Crystal structure of a ~~hypothetical~~ protein (BACOVA_00364) from Bacteroides ovatus ATCC 8483 at 1.95 A resolution==	+	==Crystal structure of a lipocalin family protein (BACOVA_00364) from Bacteroides ovatus ATCC 8483 at 1.95 A resolution==
	<StructureSection load='4gzv' size='340' side='right' caption='[[4gzv]], [[Resolution\|resolution]] 1.95Å' scene=''>		<StructureSection load='4gzv' size='340' side='right' caption='[[4gzv]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4gzv]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacteroides_ovatus_atcc_8483 Bacteroides ovatus atcc 8483~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GZV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4GZV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4gzv]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Baco1 Baco1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GZV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4GZV FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BACOVA_00364, ZP_02063416.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=411476 ~~Bacteroides ovatus ATCC 8483~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BACOVA_00364, ZP_02063416.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=411476 BACO1])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4gzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gzv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4gzv RCSB], [http://www.ebi.ac.uk/pdbsum/4gzv PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4gzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gzv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4gzv RCSB], [http://www.ebi.ac.uk/pdbsum/4gzv PDBsum]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacteroides ovatus atcc 8483~~]]	+	[[Category: Baco1]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: An eight-stranded beta barrel]]		[[Category: An eight-stranded beta barrel]]

OCA at 09:21, 10 December 2014

OCA — Wed, 10 Dec 2014 09:21:14 GMT

←Older revision		Revision as of 09:21, 10 December 2014
Line 1:		Line 1:
-	~~[[Image:4gzv.png\|left\|200px]]~~	+	==Crystal structure of a hypothetical protein (BACOVA_00364) from Bacteroides ovatus ATCC 8483 at 1.95 A resolution==
-		+	<StructureSection load='4gzv' size='340' side='right' caption='[[4gzv]], [[Resolution\|resolution]] 1.95Å' scene=''>
-	~~{{STRUCTURE_4gzv\| PDB=4gzv \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4gzv]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_ovatus_atcc_8483 Bacteroides ovatus atcc 8483]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GZV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4GZV FirstGlance]. <br>
-	===Crystal structure of a hypothetical protein (BACOVA_00364) from Bacteroides ovatus ATCC 8483 at 1.95 A resolution===	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
-		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BACOVA_00364, ZP_02063416.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=411476 Bacteroides ovatus ATCC 8483])</td></tr>
-	==~~About this Structure~~==	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4gzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gzv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4gzv RCSB], [http://www.ebi.ac.uk/pdbsum/4gzv PDBsum]</span></td></tr>
-	[[4gzv]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_ovatus_atcc_8483 Bacteroides ovatus atcc 8483]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GZV OCA].	+	</table>
		+	__TOC__
		+	</StructureSection>
	[[Category: Bacteroides ovatus atcc 8483]]		[[Category: Bacteroides ovatus atcc 8483]]
-	[[Category: ~~JCSG, Joint Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
	[[Category: An eight-stranded beta barrel]]		[[Category: An eight-stranded beta barrel]]
	[[Category: Jcsg]]		[[Category: Jcsg]]
-	[[Category: Joint center for structural genomic]]
	[[Category: Lipocalin family]]		[[Category: Lipocalin family]]
-	[[Category: Protein structure initiative]]	+	[[Category: PSI, Protein structure initiative]]
	[[Category: Psi-biology]]		[[Category: Psi-biology]]
-	[[Category: Structural genomic]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA at 07:17, 14 November 2012

OCA — Wed, 14 Nov 2012 07:17:38 GMT

←Older revision		Revision as of 07:17, 14 November 2012
Line 1:		Line 1:
-	[[Image:4gzv.~~jpg~~\|left\|200px]]	+	[[Image:4gzv.png\|left\|200px]]

	{{STRUCTURE_4gzv\| PDB=4gzv \| SCENE= }}		{{STRUCTURE_4gzv\| PDB=4gzv \| SCENE= }}

OCA at 14:03, 8 November 2012

OCA — Thu, 08 Nov 2012 14:03:50 GMT

←Older revision		Revision as of 14:03, 8 November 2012
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:4gzv.jpg\|left\|200px]]

-	~~The entry~~ 4gzv ~~is ON HOLD~~	+	{{STRUCTURE_4gzv\| PDB=4gzv \| SCENE= }}

-	~~Authors: Joint Center for Structural Genomics~~ (~~JCSG~~)	+	===Crystal structure of a hypothetical protein (BACOVA_00364) from Bacteroides ovatus ATCC 8483 at 1.95 A resolution===

-	~~Description: Crystal structure of~~ a ~~hypothetical protein (BACOVA_00364)~~ from Bacteroides ovatus ~~ATCC~~ 8483 ~~at 1~~.~~95 A resolution~~	+
		+	==About this Structure==
		+	[[4gzv]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_ovatus_atcc_8483 Bacteroides ovatus atcc 8483]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GZV OCA].
		+	[[Category: Bacteroides ovatus atcc 8483]]
		+	[[Category: JCSG, Joint Center for Structural Genomics.]]
		+	[[Category: An eight-stranded beta barrel]]
		+	[[Category: Jcsg]]
		+	[[Category: Joint center for structural genomic]]
		+	[[Category: Lipocalin family]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-biology]]
		+	[[Category: Structural genomic]]
		+	[[Category: Unknown function]]

OCA: Protected "4gzv" [edit=sysop:move=sysop]

OCA — Wed, 12 Sep 2012 04:58:03 GMT

Protected "4gzv" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:58, 12 September 2012

OCA: New page: '''Unreleased structure''' The entry 4gzv is ON HOLD Authors: Joint Center for Structural Genomics (JCSG) Description: Crystal structure of a hypothetical protein (BACOVA_00364) from B...

OCA — Wed, 12 Sep 2012 04:58:02 GMT

New page: '''Unreleased structure''' The entry 4gzv is ON HOLD Authors: Joint Center for Structural Genomics (JCSG) Description: Crystal structure of a hypothetical protein (BACOVA_00364) from B...

New page

'''Unreleased structure'''

The entry 4gzv is ON HOLD

Authors: Joint Center for Structural Genomics (JCSG)

Description: Crystal structure of a hypothetical protein (BACOVA_00364) from Bacteroides ovatus ATCC 8483 at 1.95 A resolution