4h8u - Revision history

OCA at 14:06, 8 November 2023

OCA — Wed, 08 Nov 2023 14:06:35 GMT

←Older revision		Revision as of 14:06, 8 November 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4h8u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhizobium_sp._MX-45 Rhizobium sp. MX-45]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H8U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4H8U FirstGlance]. <br>		<table><tr><td colspan='2'>[[4h8u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhizobium_sp._MX-45 Rhizobium sp. MX-45]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H8U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4H8U FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PRD_900003:sucrose'>PRD_900003</scene>, <scene name='pdbligand=TEU:1-O-ALPHA-D-GLUCOPYRANOSYL-D-FRUCTOSE'>TEU</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PRD_900003:sucrose'>PRD_900003</scene>, <scene name='pdbligand=TEU:1-O-ALPHA-D-GLUCOPYRANOSYL-D-FRUCTOSE'>TEU</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4h8u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4h8u OCA], [https://pdbe.org/4h8u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4h8u RCSB], [https://www.ebi.ac.uk/pdbsum/4h8u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4h8u ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4h8u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4h8u OCA], [https://pdbe.org/4h8u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4h8u RCSB], [https://www.ebi.ac.uk/pdbsum/4h8u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4h8u ProSAT]</span></td></tr>
	</table>		</table>

OCA at 08:05, 3 November 2022

OCA — Thu, 03 Nov 2022 08:05:20 GMT

←Older revision		Revision as of 08:05, 3 November 2022
Line 1:		Line 1:

	==MUTB inactive double mutant D200A-D415N soaked with sucrose and having as bound ligands sucrose in molecule A and the reaction product trehalulose in molecule B==		==MUTB inactive double mutant D200A-D415N soaked with sucrose and having as bound ligands sucrose in molecule A and the reaction product trehalulose in molecule B==
-	<StructureSection load='4h8u' size='340' side='right' caption='[[4h8u]], [[Resolution\|resolution]] 2.00Å' scene=''>	+	<StructureSection load='4h8u' size='340' side='right'caption='[[4h8u]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4h8u]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Rhizobium_sp.~~_mx~~-45 Rhizobium sp. mx-45]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H8U OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4H8U FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4h8u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhizobium_sp._MX-45 Rhizobium sp. MX-45]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H8U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4H8U FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=~~GOL~~:~~GLYCEROL~~'>~~GOL~~</scene>, <scene name='pdbligand=~~SUC~~:~~SUCROSE~~'>~~SUC~~</scene>, <scene name='pdbligand=~~TEU~~:~~1-O-ALPHA-D-GLUCOPYRANOSYL-D-FRUCTOSE~~'>~~TEU~~</scene><~~/td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PRD_900003:sucrose'>PRD_900003</scene>, <scene name='pdbligand=TEU:1-O-ALPHA-D-GLUCOPYRANOSYL-D-FRUCTOSE'>TEU</scene></td></tr>
-	~~<tr id~~='~~related'><td class~~=~~"sblockLbl"><b>[[Related_structure\|Related~~:~~]]</b~~></td>~~<td class="sblockDat">[[1zja\|1zja]]~~, [[2pwh\|2pwh]], [[2pwe\|2pwe]], [[2pwf\|2pwf]], [[2pwd\|2pwd]], [[2pwg\|2pwg]], [[4gi6\|4gi6]], [[4gi8\|4gi8]], [[4gi9\|4gi9]], [[4gia\|4gia]], [[4gin\|4gin]], [[1zjb\|1zjb]], [[4go9\|4go9]], [[4go8\|4go8]], [[4h2c\|4h2c]], [[4h7v\|4h7v]], [[4h8h\|4h8h]]<~~/td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4h8u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4h8u OCA], [https://pdbe.org/4h8u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4h8u RCSB], [https://www.ebi.ac.uk/pdbsum/4h8u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4h8u ProSAT]</span></td></tr>
-	~~<tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b></td><td class="sblockDat">mutB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1071045 Rhizobium sp. MX~~-~~45])</td></tr>~~	+
-	~~<tr id='activity~~'>~~<td class="sblockLbl"><b>Activity:~~</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Isomerase Isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.11.99 5.4.11.99] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4h8u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4h8u OCA], [~~http~~://pdbe.org/4h8u PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4h8u RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4h8u PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4h8u ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/M1E1F6_9HYPH M1E1F6_9HYPH]

	==See Also==		==See Also==
Line 15:		Line 14:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Isomerase~~]]	+	[[Category: Large Structures]]
-	[[Category: Rhizobium sp. mx-45]]	+	[[Category: Rhizobium sp. MX-45]]
-	[[Category: Aghajari, N]]	+	[[Category: Aghajari N]]
-	[[Category: Haser, R]]	+	[[Category: Haser R]]
-	[[Category: Lipski, A]]	+	[[Category: Lipski A]]
-	~~[[Category: Calcium binding]]~~	+
-	~~[[Category: Glycoside hydrolase]]~~	+
-	~~[[Category: Isomaltulose synthase like inactive mutant]]~~	+
-	~~[[Category: Sucrose isomerase]]~~	+
-	~~[[Category: Tim-barrel]]~~	+
-	~~[[Category: Trehalulose synthase~~]]	+

OCA at 12:16, 4 August 2016

OCA — Thu, 04 Aug 2016 12:16:38 GMT

←Older revision		Revision as of 12:16, 4 August 2016
Line 1:		Line 1:
		+
	==MUTB inactive double mutant D200A-D415N soaked with sucrose and having as bound ligands sucrose in molecule A and the reaction product trehalulose in molecule B==		==MUTB inactive double mutant D200A-D415N soaked with sucrose and having as bound ligands sucrose in molecule A and the reaction product trehalulose in molecule B==
	<StructureSection load='4h8u' size='340' side='right' caption='[[4h8u]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='4h8u' size='340' side='right' caption='[[4h8u]], [[Resolution\|resolution]] 2.00Å' scene=''>
Line 7:		Line 8:
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">mutB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1071045 Rhizobium sp. MX-45])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">mutB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1071045 Rhizobium sp. MX-45])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Isomerase Isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.11.99 5.4.11.99] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Isomerase Isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.11.99 5.4.11.99] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4h8u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4h8u OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4h8u RCSB], [http://www.ebi.ac.uk/pdbsum/4h8u PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4h8u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4h8u OCA], [http://pdbe.org/4h8u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4h8u RCSB], [http://www.ebi.ac.uk/pdbsum/4h8u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4h8u ProSAT]</span></td></tr>
	</table>		</table>

OCA at 10:54, 21 December 2014

OCA — Sun, 21 Dec 2014 10:54:01 GMT

←Older revision		Revision as of 10:54, 21 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_4h8u\| PDB=4h8u \| SCENE= }}~~	+	==MUTB inactive double mutant D200A-D415N soaked with sucrose and having as bound ligands sucrose in molecule A and the reaction product trehalulose in molecule B==
-	===MUTB inactive double mutant D200A-D415N soaked with sucrose and having as bound ligands sucrose in molecule A and the reaction product trehalulose in molecule B===	+	<StructureSection load='4h8u' size='340' side='right' caption='[[4h8u]], [[Resolution\|resolution]] 2.00Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4h8u]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhizobium_sp._mx-45 Rhizobium sp. mx-45]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H8U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4H8U FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SUC:SUCROSE'>SUC</scene>, <scene name='pdbligand=TEU:1-O-ALPHA-D-GLUCOPYRANOSYL-D-FRUCTOSE'>TEU</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zja\|1zja]], [[2pwh\|2pwh]], [[2pwe\|2pwe]], [[2pwf\|2pwf]], [[2pwd\|2pwd]], [[2pwg\|2pwg]], [[4gi6\|4gi6]], [[4gi8\|4gi8]], [[4gi9\|4gi9]], [[4gia\|4gia]], [[4gin\|4gin]], [[1zjb\|1zjb]], [[4go9\|4go9]], [[4go8\|4go8]], [[4h2c\|4h2c]], [[4h7v\|4h7v]], [[4h8h\|4h8h]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">mutB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1071045 Rhizobium sp. MX-45])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Isomerase Isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.11.99 5.4.11.99] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4h8u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4h8u OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4h8u RCSB], [http://www.ebi.ac.uk/pdbsum/4h8u PDBsum]</span></td></tr>
		+	</table>

-	==~~About this Structure~~==	+	==See Also==
-	[[~~4h8u~~]] ~~is a 2 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Rhizobium_sp._mx-45 Rhizobium sp. mx-45]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H8U OCA].~~	+	*[[Trehalulose synthase\|Trehalulose synthase]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Isomerase]]		[[Category: Isomerase]]
	[[Category: Rhizobium sp. mx-45]]		[[Category: Rhizobium sp. mx-45]]
-	[[Category: Aghajari, N.]]	+	[[Category: Aghajari, N]]
-	[[Category: Haser, R.]]	+	[[Category: Haser, R]]
-	[[Category: Lipski, A.]]	+	[[Category: Lipski, A]]
	[[Category: Calcium binding]]		[[Category: Calcium binding]]
	[[Category: Glycoside hydrolase]]		[[Category: Glycoside hydrolase]]
	[[Category: Isomaltulose synthase like inactive mutant]]		[[Category: Isomaltulose synthase like inactive mutant]]
-	[[Category: Isomerase]]
	[[Category: Sucrose isomerase]]		[[Category: Sucrose isomerase]]
	[[Category: Tim-barrel]]		[[Category: Tim-barrel]]
	[[Category: Trehalulose synthase]]		[[Category: Trehalulose synthase]]

OCA at 08:18, 29 September 2013

OCA — Sun, 29 Sep 2013 08:18:03 GMT

←Older revision		Revision as of 08:18, 29 September 2013
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{STRUCTURE_4h8u\| PDB=4h8u \| SCENE= }}
		+	===MUTB inactive double mutant D200A-D415N soaked with sucrose and having as bound ligands sucrose in molecule A and the reaction product trehalulose in molecule B===

-	~~The entry~~ 4h8u is ~~ON HOLD until Paper Publication~~	+	==About this Structure==
-		+	[[4h8u]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhizobium_sp._mx-45 Rhizobium sp. mx-45]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H8U OCA].
-	~~Authors~~: ~~Lipski, A~~., Haser, R., ~~Aghajari, N~~.	+	[[Category: Isomerase]]
-		+	[[Category: Rhizobium sp. mx-45]]
-	~~Description~~: ~~MUTB~~ inactive ~~double~~ mutant ~~D200A~~-~~D415N soaked with sucrose and having as bound ligands sucrose in molecule A and the reaction product trehalulose in molecule B~~	+	[[Category: Aghajari, N.]]
		+	[[Category: Haser, R.]]
		+	[[Category: Lipski, A.]]
		+	[[Category: Calcium binding]]
		+	[[Category: Glycoside hydrolase]]
		+	[[Category: Isomaltulose synthase like inactive mutant]]
		+	[[Category: Isomerase]]
		+	[[Category: Sucrose isomerase]]
		+	[[Category: Tim-barrel]]
		+	[[Category: Trehalulose synthase]]

OCA at 08:37, 31 October 2012

OCA — Wed, 31 Oct 2012 08:37:27 GMT

←Older revision		Revision as of 08:37, 31 October 2012
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4h8u is ON HOLD	+	The entry 4h8u is ON HOLD until Paper Publication

	Authors: Lipski, A., Haser, R., Aghajari, N.		Authors: Lipski, A., Haser, R., Aghajari, N.

	Description: MUTB inactive double mutant D200A-D415N soaked with sucrose and having as bound ligands sucrose in molecule A and the reaction product trehalulose in molecule B		Description: MUTB inactive double mutant D200A-D415N soaked with sucrose and having as bound ligands sucrose in molecule A and the reaction product trehalulose in molecule B

OCA at 06:33, 17 October 2012

OCA — Wed, 17 Oct 2012 06:33:48 GMT

←Older revision		Revision as of 06:33, 17 October 2012
Line 3:		Line 3:
	The entry 4h8u is ON HOLD		The entry 4h8u is ON HOLD

-	Authors: ~~LIPSKI~~, A., ~~HASER~~, R., ~~AGHAJARI~~, N.	+	Authors: Lipski, A., Haser, R., Aghajari, N.

-	Description: MUTB ~~INACTIVE DOUBLE MUTANT~~ D200A-D415N ~~SOAKED WITH SUCROSE AND HAVING AS BOUND LIGANDS SUCROSE IN MOLECULE~~ A ~~AND THE REACTION PRODUCT TREHALULOSE IN MOLECULE~~ B	+	Description: MUTB inactive double mutant D200A-D415N soaked with sucrose and having as bound ligands sucrose in molecule A and the reaction product trehalulose in molecule B

OCA: Protected "4h8u" [edit=sysop:move=sysop]

OCA — Wed, 03 Oct 2012 05:49:53 GMT

Protected "4h8u" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:49, 3 October 2012

OCA: New page: '''Unreleased structure''' The entry 4h8u is ON HOLD Authors: LIPSKI, A., HASER, R., AGHAJARI, N. Description: MUTB INACTIVE DOUBLE MUTANT D200A-D415N SOAKED WITH SUCROSE AND HAVING AS...

OCA — Wed, 03 Oct 2012 05:49:52 GMT

New page: '''Unreleased structure''' The entry 4h8u is ON HOLD Authors: LIPSKI, A., HASER, R., AGHAJARI, N. Description: MUTB INACTIVE DOUBLE MUTANT D200A-D415N SOAKED WITH SUCROSE AND HAVING AS...

New page

'''Unreleased structure'''

The entry 4h8u is ON HOLD

Authors: LIPSKI, A., HASER, R., AGHAJARI, N.

Description: MUTB INACTIVE DOUBLE MUTANT D200A-D415N SOAKED WITH SUCROSE AND HAVING AS BOUND LIGANDS SUCROSE IN MOLECULE A AND THE REACTION PRODUCT TREHALULOSE IN MOLECULE B