4ip4 - Revision history

OCA at 15:28, 20 September 2023

OCA — Wed, 20 Sep 2023 15:28:19 GMT

←Older revision		Revision as of 15:28, 20 September 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4ip4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruegeria_sp._TM1040 Ruegeria sp. TM1040]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IP4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4IP4 FirstGlance]. <br>		<table><tr><td colspan='2'>[[4ip4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruegeria_sp._TM1040 Ruegeria sp. TM1040]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IP4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4IP4 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO2:CARBON+DIOXIDE'>CO2</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.128Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO2:CARBON+DIOXIDE'>CO2</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ip4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ip4 OCA], [https://pdbe.org/4ip4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ip4 RCSB], [https://www.ebi.ac.uk/pdbsum/4ip4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ip4 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ip4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ip4 OCA], [https://pdbe.org/4ip4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ip4 RCSB], [https://www.ebi.ac.uk/pdbsum/4ip4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ip4 ProSAT]</span></td></tr>
	</table>		</table>

OCA at 21:01, 16 November 2022

OCA — Wed, 16 Nov 2022 21:01:37 GMT

←Older revision		Revision as of 21:01, 16 November 2022
Line 1:		Line 1:

	==Crystal structure of l-fuconate dehydratase from Silicibacter sp. tm1040 liganded with Mg==		==Crystal structure of l-fuconate dehydratase from Silicibacter sp. tm1040 liganded with Mg==
-	<StructureSection load='4ip4' size='340' side='right' caption='[[4ip4]], [[Resolution\|resolution]] 2.13Å' scene=''>	+	<StructureSection load='4ip4' size='340' side='right'caption='[[4ip4]], [[Resolution\|resolution]] 2.13Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4ip4]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Ruest Ruest~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IP4 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4IP4 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4ip4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruegeria_sp._TM1040 Ruegeria sp. TM1040]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IP4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4IP4 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CO2:CARBON+DIOXIDE'>CO2</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO2:CARBON+DIOXIDE'>CO2</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4ip5\|4ip5]]</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ip4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ip4 OCA], [https://pdbe.org/4ip4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ip4 RCSB], [https://www.ebi.ac.uk/pdbsum/4ip4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ip4 ProSAT]</span></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TM1040_3391 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=292414 RUEST])~~</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4ip4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ip4 OCA], [~~http~~://pdbe.org/4ip4 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4ip4 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4ip4 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4ip4 ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q1GLV3_RUEST Q1GLV3_RUEST]
		+
		+	==See Also==
		+	*[[Mandelate racemase/muconate lactonizing enzyme 3D structures\|Mandelate racemase/muconate lactonizing enzyme 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Ruest~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Almo, S C~~]]	+	[[Category: Ruegeria sp. TM1040]]
-	[[Category: ~~Fedorov, A A~~]]	+	[[Category: Almo SC]]
-	[[Category: Fedorov~~, E V~~]]	+	[[Category: Fedorov AA]]
-	[[Category: ~~Gerlt, J A~~]]	+	[[Category: Fedorov EV]]
-	[[Category: ~~Lukk, T~~]]	+	[[Category: Gerlt JA]]
-	[[Category: ~~Enolase fold]]~~	+	[[Category: Lukk T]]
-	~~[[Category: Glycerol in the active site]]~~	+
-	~~[[Category: Isomerase]]~~	+
-	~~[[Category: L-fuconate dehydratase~~]]	+

OCA at 10:47, 4 August 2016

OCA — Thu, 04 Aug 2016 10:47:51 GMT

←Older revision		Revision as of 10:47, 4 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of l-fuconate dehydratase from Silicibacter sp. tm1040 liganded with Mg==		==Crystal structure of l-fuconate dehydratase from Silicibacter sp. tm1040 liganded with Mg==
	<StructureSection load='4ip4' size='340' side='right' caption='[[4ip4]], [[Resolution\|resolution]] 2.13Å' scene=''>		<StructureSection load='4ip4' size='340' side='right' caption='[[4ip4]], [[Resolution\|resolution]] 2.13Å' scene=''>
Line 6:		Line 7:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4ip5\|4ip5]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4ip5\|4ip5]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TM1040_3391 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=292414 RUEST])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TM1040_3391 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=292414 RUEST])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ip4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ip4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ip4 RCSB], [http://www.ebi.ac.uk/pdbsum/4ip4 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ip4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ip4 OCA], [http://pdbe.org/4ip4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ip4 RCSB], [http://www.ebi.ac.uk/pdbsum/4ip4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ip4 ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__

OCA at 17:35, 21 December 2014

OCA — Sun, 21 Dec 2014 17:35:23 GMT

←Older revision		Revision as of 17:35, 21 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_4ip4\| PDB=4ip4 \| SCENE= }}~~	+	==Crystal structure of l-fuconate dehydratase from Silicibacter sp. tm1040 liganded with Mg==
-	===Crystal structure of l-fuconate dehydratase from Silicibacter sp. tm1040 liganded with Mg===	+	<StructureSection load='4ip4' size='340' side='right' caption='[[4ip4]], [[Resolution\|resolution]] 2.13Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[4ip4]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ruest Ruest]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IP4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4IP4 FirstGlance]. <br>
-	[[4ip4]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IP4 OCA].	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CO2:CARBON+DIOXIDE'>CO2</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	[[Category: Almo, S C.]]	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4ip5\|4ip5]]</td></tr>
-	[[Category: Fedorov, A A.]]	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TM1040_3391 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=292414 RUEST])</td></tr>
-	[[Category: Fedorov, E V.]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ip4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ip4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ip4 RCSB], [http://www.ebi.ac.uk/pdbsum/4ip4 PDBsum]</span></td></tr>
-	[[Category: Gerlt, J A.]]	+	</table>
-	[[Category: Lukk, T.]]	+	__TOC__
		+	</StructureSection>
		+	[[Category: Ruest]]
		+	[[Category: Almo, S C]]
		+	[[Category: Fedorov, A A]]
		+	[[Category: Fedorov, E V]]
		+	[[Category: Gerlt, J A]]
		+	[[Category: Lukk, T]]
	[[Category: Enolase fold]]		[[Category: Enolase fold]]
	[[Category: Glycerol in the active site]]		[[Category: Glycerol in the active site]]
	[[Category: Isomerase]]		[[Category: Isomerase]]
	[[Category: L-fuconate dehydratase]]		[[Category: L-fuconate dehydratase]]

OCA at 07:31, 4 December 2013

OCA — Wed, 04 Dec 2013 07:31:33 GMT

←Older revision		Revision as of 07:31, 4 December 2013
Line 1:		Line 1:
-	~~'''Unreleased~~ structure~~'''~~	+	{{STRUCTURE_4ip4\| PDB=4ip4 \| SCENE= }}
		+	===Crystal structure of l-fuconate dehydratase from Silicibacter sp. tm1040 liganded with Mg===

-	~~The entry~~ 4ip4 is ~~ON HOLD until Paper Publication~~	+	==About this Structure==
-		+	[[4ip4]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IP4 OCA].
-	~~Authors~~: Fedorov, A.A., Fedorov, E.V.~~, Lukk, T.,~~ Gerlt, J.A., ~~Almo, S.C~~.	+	[[Category: Almo, S C.]]
-		+	[[Category: Fedorov, A A.]]
-	~~Description~~: ~~Crystal structure of l~~-fuconate dehydratase ~~from Silicibacter sp. tm1040 liganded with mg~~	+	[[Category: Fedorov, E V.]]
		+	[[Category: Gerlt, J A.]]
		+	[[Category: Lukk, T.]]
		+	[[Category: Enolase fold]]
		+	[[Category: Glycerol in the active site]]
		+	[[Category: Isomerase]]
		+	[[Category: L-fuconate dehydratase]]

OCA at 12:26, 6 February 2013

OCA — Wed, 06 Feb 2013 12:26:59 GMT

←Older revision		Revision as of 12:26, 6 February 2013
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4ip4 is ON HOLD	+	The entry 4ip4 is ON HOLD until Paper Publication

-	Authors: Fedorov, A.A., Fedorov, E.V., Lukk,T., Gerlt, J.A., Almo, S.C.	+	Authors: Fedorov, A.A., Fedorov, E.V., Lukk, T., Gerlt, J.A., Almo, S.C.

-	Description: ~~CRYSTAL STRUCTURE OF L~~-~~FUCONATE DEHYDRATASE FROM~~ Silicibacter sp. ~~TM1040 LIGANDED WITH MG~~	+	Description: Crystal structure of l-fuconate dehydratase from Silicibacter sp. tm1040 liganded with mg

OCA: Protected "4ip4" [edit=sysop:move=sysop]

OCA — Wed, 16 Jan 2013 08:28:34 GMT

Protected "4ip4" [edit=sysop:move=sysop]

←Older revision

Revision as of 08:28, 16 January 2013

OCA: New page: '''Unreleased structure''' The entry 4ip4 is ON HOLD Authors: Fedorov, A.A., Fedorov, E.V., Lukk,T., Gerlt, J.A., Almo, S.C. Description: CRYSTAL STRUCTURE OF L-FUCONATE DEHYDRATASE FR...

OCA — Wed, 16 Jan 2013 08:28:33 GMT

New page: '''Unreleased structure''' The entry 4ip4 is ON HOLD Authors: Fedorov, A.A., Fedorov, E.V., Lukk,T., Gerlt, J.A., Almo, S.C. Description: CRYSTAL STRUCTURE OF L-FUCONATE DEHYDRATASE FR...

New page

'''Unreleased structure'''

The entry 4ip4 is ON HOLD

Authors: Fedorov, A.A., Fedorov, E.V., Lukk,T., Gerlt, J.A., Almo, S.C.

Description: CRYSTAL STRUCTURE OF L-FUCONATE DEHYDRATASE FROM Silicibacter sp. TM1040 LIGANDED WITH MG