4jj9 - Revision history

OCA at 11:16, 24 November 2022

OCA — Thu, 24 Nov 2022 11:16:16 GMT

←Older revision		Revision as of 11:16, 24 November 2022
Line 1:		Line 1:

	==Crystal Structure of 5-carboxymethyl-2-hydroxymuconate delta-isomerase==		==Crystal Structure of 5-carboxymethyl-2-hydroxymuconate delta-isomerase==
-	<StructureSection load='4jj9' size='340' side='right' caption='[[4jj9]], [[Resolution\|resolution]] 1.76Å' scene=''>	+	<StructureSection load='4jj9' size='340' side='right'caption='[[4jj9]], [[Resolution\|resolution]] 1.76Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4jj9]] is a 3 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Alcaligenes_bronchisepticus Alcaligenes bronchisepticus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JJ9 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4JJ9 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4jj9]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bordetella_bronchiseptica_RB50 Bordetella bronchiseptica RB50]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JJ9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4JJ9 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"~~><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	~~<tr~~ id~~='NonStdRes'><td class~~="~~sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat~~"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>~~</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4jj9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jj9 OCA], [https://pdbe.org/4jj9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4jj9 RCSB], [https://www.ebi.ac.uk/pdbsum/4jj9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4jj9 ProSAT]</span></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BB0738~~, ~~hpaF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=257310 Alcaligenes bronchisepticus])~~<~~/td></tr>~~	+
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b></td><td class="sblockDat"><span class='plainlinks~~'>[http://en.wikipedia.org/wiki/5-carboxymethyl-2-hydroxymuconate_Delta-isomerase 5-carboxymethyl-2-hydroxymuconate Delta-isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.3.10 5.3.3.10] </~~span~~></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4jj9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jj9 OCA], [~~http~~://pdbe.org/4jj9 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4jj9 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4jj9 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4jj9 ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A0A0H3LHY8_BORBR A0A0H3LHY8_BORBR]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~5-carboxymethyl-2-hydroxymuconate Delta-isomerase~~]]	+	[[Category: Bordetella bronchiseptica RB50]]
-	[[Category: ~~Alcaligenes bronchisepticus~~]]	+	[[Category: Large Structures]]
-	[[Category: Almo~~, S C~~]]	+	[[Category: Al Obaidi N]]
-	[[Category: Chamala, S]]	+	[[Category: Almo SC]]
-	[[Category: Eswaramoorthy, S]]	+	[[Category: Chamala S]]
-	[[Category: Evans, B]]	+	[[Category: Eswaramoorthy S]]
-	[[Category: Foti, F]]	+	[[Category: Evans B]]
-	[[Category: Gizzi, A]]	+	[[Category: Foti F]]
-	[[Category: Hillerich, B]]	+	[[Category: Gizzi A]]
-	[[Category: Kar, A]]	+	[[Category: Hillerich B]]
-	[[Category: Lafleur, J]]	+	[[Category: Kar A]]
-	~~[[Category: Structural genomic]]~~	+	[[Category: Lafleur J]]
-	~~[[Category: Obaidi, N Al~~]]	+	[[Category: Seidel R]]
-	[[Category: Seidel, R]]	+	[[Category: Swaminathan S]]
-	[[Category: Swaminathan, S]]	+	[[Category: Villigas G]]
-	[[Category: Villigas, G]]	+	[[Category: Zencheck W]]
-	[[Category: Zencheck, W]]	+
-	~~[[Category: Alpha-beeta]]~~	+
-	~~[[Category: Homoprotocatechuate catabolic pathway]]~~	+
-	~~[[Category: Isomerase]]~~	+
-	~~[[Category: Nysgrc]]~~	+
-	~~[[Category: Psi-biology]]~~	+
-	~~[[Category: Trimer~~]]	+

OCA at 06:34, 5 August 2016

OCA — Fri, 05 Aug 2016 06:34:48 GMT

←Older revision		Revision as of 06:34, 5 August 2016
Line 1:		Line 1:
		+
	==Crystal Structure of 5-carboxymethyl-2-hydroxymuconate delta-isomerase==		==Crystal Structure of 5-carboxymethyl-2-hydroxymuconate delta-isomerase==
	<StructureSection load='4jj9' size='340' side='right' caption='[[4jj9]], [[Resolution\|resolution]] 1.76Å' scene=''>		<StructureSection load='4jj9' size='340' side='right' caption='[[4jj9]], [[Resolution\|resolution]] 1.76Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4jj9]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bordetella_bronchiseptica_rb50 Bordetella bronchiseptica rb50~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JJ9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4JJ9 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4jj9]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Alcaligenes_bronchisepticus Alcaligenes bronchisepticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JJ9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4JJ9 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BB0738, hpaF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=257310 ~~Bordetella bronchiseptica RB50~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BB0738, hpaF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=257310 Alcaligenes bronchisepticus])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/5-carboxymethyl-2-hydroxymuconate_Delta-isomerase 5-carboxymethyl-2-hydroxymuconate Delta-isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.3.10 5.3.3.10] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/5-carboxymethyl-2-hydroxymuconate_Delta-isomerase 5-carboxymethyl-2-hydroxymuconate Delta-isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.3.10 5.3.3.10] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jj9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jj9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4jj9 RCSB], [http://www.ebi.ac.uk/pdbsum/4jj9 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jj9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jj9 OCA], [http://pdbe.org/4jj9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4jj9 RCSB], [http://www.ebi.ac.uk/pdbsum/4jj9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4jj9 ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase]]		[[Category: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase]]
-	[[Category: ~~Bordetella bronchiseptica rb50~~]]	+	[[Category: Alcaligenes bronchisepticus]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: Chamala, S]]		[[Category: Chamala, S]]

OCA at 15:05, 21 December 2014

OCA — Sun, 21 Dec 2014 15:05:53 GMT

←Older revision		Revision as of 15:05, 21 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_4jj9\| PDB=4jj9 \| SCENE= }}~~	+	==Crystal Structure of 5-carboxymethyl-2-hydroxymuconate delta-isomerase==
-	===Crystal Structure of 5-carboxymethyl-2-hydroxymuconate delta-isomerase===	+	<StructureSection load='4jj9' size='340' side='right' caption='[[4jj9]], [[Resolution\|resolution]] 1.76Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[4jj9]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bordetella_bronchiseptica_rb50 Bordetella bronchiseptica rb50]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JJ9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4JJ9 FirstGlance]. <br>
-	[[4jj9]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bordetella_bronchiseptica_rb50 Bordetella bronchiseptica rb50]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JJ9 OCA].	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BB0738, hpaF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=257310 Bordetella bronchiseptica RB50])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/5-carboxymethyl-2-hydroxymuconate_Delta-isomerase 5-carboxymethyl-2-hydroxymuconate Delta-isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.3.10 5.3.3.10] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jj9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jj9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4jj9 RCSB], [http://www.ebi.ac.uk/pdbsum/4jj9 PDBsum]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
	[[Category: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase]]		[[Category: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase]]
	[[Category: Bordetella bronchiseptica rb50]]		[[Category: Bordetella bronchiseptica rb50]]
-	[[Category: Almo, S C.]]	+	[[Category: Almo, S C]]
-	[[Category: Chamala, S.]]	+	[[Category: Chamala, S]]
-	[[Category: Eswaramoorthy, S.]]	+	[[Category: Eswaramoorthy, S]]
-	[[Category: Evans, B.]]	+	[[Category: Evans, B]]
-	[[Category: Foti, F.]]	+	[[Category: Foti, F]]
-	[[Category: Gizzi, A.]]	+	[[Category: Gizzi, A]]
-	[[Category: Hillerich, B.]]	+	[[Category: Hillerich, B]]
-	[[Category: Kar, A.]]	+	[[Category: Kar, A]]
-	[[Category: Lafleur, J.]]	+	[[Category: Lafleur, J]]
-	[[Category: ~~NYSGRC, New York~~ Structural ~~Genomics Research Consortium.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Obaidi, N Al.]]	+	[[Category: Obaidi, N Al]]
-	[[Category: Seidel, R.]]	+	[[Category: Seidel, R]]
-	[[Category: Swaminathan, S.]]	+	[[Category: Swaminathan, S]]
-	[[Category: Villigas, G.]]	+	[[Category: Villigas, G]]
-	[[Category: Zencheck, W.]]	+	[[Category: Zencheck, W]]
	[[Category: Alpha-beeta]]		[[Category: Alpha-beeta]]
	[[Category: Homoprotocatechuate catabolic pathway]]		[[Category: Homoprotocatechuate catabolic pathway]]
	[[Category: Isomerase]]		[[Category: Isomerase]]
-	[[Category: New york structural genomics research consortium]]
	[[Category: Nysgrc]]		[[Category: Nysgrc]]
	[[Category: Psi-biology]]		[[Category: Psi-biology]]
-	[[Category: Structural genomic]]
	[[Category: Trimer]]		[[Category: Trimer]]

OCA at 07:55, 2 May 2013

OCA — Thu, 02 May 2013 07:55:10 GMT

←Older revision		Revision as of 07:55, 2 May 2013
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{STRUCTURE_4jj9\| PDB=4jj9 \| SCENE= }}
		+	===Crystal Structure of 5-carboxymethyl-2-hydroxymuconate delta-isomerase===

-	~~The entry~~ 4jj9 is ~~ON HOLD~~	+	==About this Structure==
-		+	[[4jj9]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bordetella_bronchiseptica_rb50 Bordetella bronchiseptica rb50]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JJ9 OCA].
-	~~Authors~~: ~~Eswaramoorthy~~, S., Chamala, S., Evans, B., Foti, F., Gizzi, A., Hillerich, B., Kar, A., Lafleur, J., Seidel, R., Villigas, G., Zencheck, W.~~, Al Obaidi, N., Almo, S.C., Swaminathan, S.,~~ New ~~York Structural Genomics Research Consortium (NYSGRC)~~	+	[[Category: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase]]
-		+	[[Category: Bordetella bronchiseptica rb50]]
-	~~Description~~: ~~Crystal Structure of 5~~-~~carboxymethyl-2-hydroxymuconate delta-isomerase~~	+	[[Category: Almo, S C.]]
		+	[[Category: Chamala, S.]]
		+	[[Category: Eswaramoorthy, S.]]
		+	[[Category: Evans, B.]]
		+	[[Category: Foti, F.]]
		+	[[Category: Gizzi, A.]]
		+	[[Category: Hillerich, B.]]
		+	[[Category: Kar, A.]]
		+	[[Category: Lafleur, J.]]
		+	[[Category: NYSGRC, New York Structural Genomics Research Consortium.]]
		+	[[Category: Obaidi, N Al.]]
		+	[[Category: Seidel, R.]]
		+	[[Category: Swaminathan, S.]]
		+	[[Category: Villigas, G.]]
		+	[[Category: Zencheck, W.]]
		+	[[Category: Alpha-beeta]]
		+	[[Category: Homoprotocatechuate catabolic pathway]]
		+	[[Category: Isomerase]]
		+	[[Category: New york structural genomics research consortium]]
		+	[[Category: Nysgrc]]
		+	[[Category: Psi-biology]]
		+	[[Category: Structural genomic]]
		+	[[Category: Trimer]]

OCA at 16:20, 20 March 2013

OCA — Wed, 20 Mar 2013 16:20:22 GMT

←Older revision		Revision as of 16:20, 20 March 2013
Line 3:		Line 3:
	The entry 4jj9 is ON HOLD		The entry 4jj9 is ON HOLD

-	Authors: Eswaramoorthy, S., ~~CHAMALA~~, S., ~~EVANS~~, B., ~~FOTI~~, F., ~~GIZZI~~, A., ~~HILLERICH~~, B., ~~KAR~~, A., ~~LAFLEUR~~, J., ~~SEIDEL~~, R., ~~VILLIGAS~~, G., ~~ZENCHECK~~, W., ~~AL OBAIDI~~, N., Almo, S.C., Swaminathan, S., New York Structural Genomics Research Consortium (NYSGRC)	+	Authors: Eswaramoorthy, S., Chamala, S., Evans, B., Foti, F., Gizzi, A., Hillerich, B., Kar, A., Lafleur, J., Seidel, R., Villigas, G., Zencheck, W., Al Obaidi, N., Almo, S.C., Swaminathan, S., New York Structural Genomics Research Consortium (NYSGRC)

	Description: Crystal Structure of 5-carboxymethyl-2-hydroxymuconate delta-isomerase		Description: Crystal Structure of 5-carboxymethyl-2-hydroxymuconate delta-isomerase

OCA: Protected "4jj9" [edit=sysop:move=sysop]

OCA — Wed, 13 Mar 2013 10:03:53 GMT

Protected "4jj9" [edit=sysop:move=sysop]

←Older revision

Revision as of 10:03, 13 March 2013

OCA: New page: '''Unreleased structure''' The entry 4jj9 is ON HOLD Authors: Eswaramoorthy, S., CHAMALA, S., EVANS, B., FOTI, F., GIZZI, A., HILLERICH, B., KAR, A., LAFLEUR, J., SEIDEL, R., VILLIGAS, ...

OCA — Wed, 13 Mar 2013 10:03:52 GMT

New page: '''Unreleased structure''' The entry 4jj9 is ON HOLD Authors: Eswaramoorthy, S., CHAMALA, S., EVANS, B., FOTI, F., GIZZI, A., HILLERICH, B., KAR, A., LAFLEUR, J., SEIDEL, R., VILLIGAS, ...

New page

'''Unreleased structure'''

The entry 4jj9 is ON HOLD

Authors: Eswaramoorthy, S., CHAMALA, S., EVANS, B., FOTI, F., GIZZI, A., HILLERICH, B., KAR, A., LAFLEUR, J., SEIDEL, R., VILLIGAS, G., ZENCHECK, W., AL OBAIDI, N., Almo, S.C., Swaminathan, S., New York Structural Genomics Research Consortium (NYSGRC)

Description: Crystal Structure of 5-carboxymethyl-2-hydroxymuconate delta-isomerase